Experiment: Cisplatin 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS00815 and HSERO_RS00820 are separated by 150 nucleotides HSERO_RS00820 and HSERO_RS00825 are separated by 92 nucleotides HSERO_RS00825 and HSERO_RS00830 are separated by 3 nucleotides
HSERO_RS00815: HSERO_RS00815 - sulfurtransferase, at 169,055 to 169,468
_RS00815
HSERO_RS00820: HSERO_RS00820 - phosphoglyceromutase, at 169,619 to 170,365
_RS00820
HSERO_RS00825: HSERO_RS00825 - protease, at 170,458 to 171,870
_RS00825
HSERO_RS00830: HSERO_RS00830 - peptidase S41, at 171,874 to 173,370
_RS00830
Position (kb) 170
171
172 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 169.535 kb on - strand at 169.535 kb on - strand at 169.537 kb on + strand at 169.537 kb on + strand at 169.545 kb on - strand at 170.374 kb on + strand at 170.382 kb on - strand at 170.529 kb on - strand at 170.646 kb on - strand, within HSERO_RS00825 at 170.656 kb on - strand, within HSERO_RS00825 at 170.763 kb on - strand, within HSERO_RS00825 at 170.795 kb on - strand, within HSERO_RS00825 at 170.795 kb on - strand, within HSERO_RS00825 at 170.850 kb on + strand, within HSERO_RS00825 at 170.905 kb on + strand, within HSERO_RS00825 at 171.298 kb on - strand, within HSERO_RS00825 at 171.310 kb on + strand, within HSERO_RS00825 at 171.369 kb on - strand, within HSERO_RS00825 at 171.596 kb on + strand, within HSERO_RS00825 at 171.644 kb on + strand, within HSERO_RS00825 at 171.721 kb on + strand, within HSERO_RS00825 at 171.721 kb on + strand, within HSERO_RS00825 at 171.729 kb on - strand at 171.744 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.003 mg/ml remove 169,535 - -0.7 169,535 - -2.5 169,537 + -0.2 169,537 + -0.3 169,545 - -2.6 170,374 + +0.5 170,382 - -2.1 170,529 - -0.6 170,646 - HSERO_RS00825 0.13 -1.8 170,656 - HSERO_RS00825 0.14 -1.6 170,763 - HSERO_RS00825 0.22 -4.3 170,795 - HSERO_RS00825 0.24 -1.0 170,795 - HSERO_RS00825 0.24 -1.3 170,850 + HSERO_RS00825 0.28 -1.9 170,905 + HSERO_RS00825 0.32 -1.5 171,298 - HSERO_RS00825 0.59 -0.1 171,310 + HSERO_RS00825 0.60 -0.9 171,369 - HSERO_RS00825 0.64 -2.0 171,596 + HSERO_RS00825 0.81 -1.0 171,644 + HSERO_RS00825 0.84 -1.3 171,721 + HSERO_RS00825 0.89 -2.6 171,721 + HSERO_RS00825 0.89 -2.5 171,729 - -2.1 171,744 + -3.4
Or see this region's nucleotide sequence