Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS24830

Experiment: D-Mannose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Mannose (C)
6,055,123	-		CA265_RS24820	0.88	+0.2
6,055,165	-				-0.7
6,055,261	-				-1.3
6,055,273	-				-0.9
6,055,273	-				+2.1
6,055,279	+				+0.5
6,055,287	+		CA265_RS24825	0.10	-0.2
6,055,293	-		CA265_RS24825	0.11	-0.1
6,055,293	-		CA265_RS24825	0.11	+0.9
6,055,348	+		CA265_RS24825	0.17	+0.1
6,055,360	-		CA265_RS24825	0.18	+0.6
6,055,386	+		CA265_RS24825	0.21	+0.3
6,055,386	+		CA265_RS24825	0.21	+0.6
6,055,386	+		CA265_RS24825	0.21	-0.9
6,055,399	+		CA265_RS24825	0.23	+0.2
6,055,405	-		CA265_RS24825	0.24	-1.6
6,055,459	+		CA265_RS24825	0.30	-0.3
6,055,460	-		CA265_RS24825	0.30	+1.4
6,055,460	-		CA265_RS24825	0.30	-2.1
6,055,507	+		CA265_RS24825	0.35	-0.1
6,055,519	+		CA265_RS24825	0.36	-0.3
6,055,519	+		CA265_RS24825	0.36	+0.3
6,055,519	+		CA265_RS24825	0.36	+0.3
6,055,531	+		CA265_RS24825	0.38	-0.7
6,055,559	+		CA265_RS24825	0.41	-0.4
6,055,626	-		CA265_RS24825	0.48	-1.3
6,055,646	-		CA265_RS24825	0.51	-0.1
6,055,649	-		CA265_RS24825	0.51	+0.3
6,055,661	+		CA265_RS24825	0.52	+0.8
6,055,661	+		CA265_RS24825	0.52	-0.1
6,055,661	+		CA265_RS24825	0.52	-0.4
6,055,662	-		CA265_RS24825	0.52	-0.8
6,055,663	+		CA265_RS24825	0.53	-0.3
6,055,673	+		CA265_RS24825	0.54	-0.4
6,055,674	-		CA265_RS24825	0.54	+0.2
6,055,683	+		CA265_RS24825	0.55	-0.4
6,055,684	-		CA265_RS24825	0.55	-1.0
6,055,686	+		CA265_RS24825	0.55	+1.5
6,055,686	+		CA265_RS24825	0.55	-0.7
6,055,741	+		CA265_RS24825	0.61	-2.6
6,055,745	+		CA265_RS24825	0.62	+0.1
6,055,780	+		CA265_RS24825	0.66	+0.1
6,055,781	-		CA265_RS24825	0.66	-1.7
6,055,791	-		CA265_RS24825	0.67	+0.5
6,055,806	+		CA265_RS24825	0.69	-0.0
6,055,806	+		CA265_RS24825	0.69	+0.9
6,055,807	-		CA265_RS24825	0.69	-0.5
6,055,886	+		CA265_RS24825	0.78	+0.6
6,055,887	-		CA265_RS24825	0.78	-0.0
6,055,904	+		CA265_RS24825	0.80	-0.3
6,055,961	+		CA265_RS24825	0.86	+0.8
6,055,962	-		CA265_RS24825	0.86	-0.8
6,056,003	+				+0.1
6,056,024	+				-0.5
6,056,086	+				+0.4
6,056,167	+				-0.0
6,056,175	+				-1.4
6,056,182	-				+0.1
6,056,186	+				+0.5
6,056,264	-				+0.1
6,056,266	+				-1.9
6,056,266	+				-0.3
6,056,284	-				+1.7
6,056,308	-		CA265_RS24830	0.11	+0.9
6,056,308	-		CA265_RS24830	0.11	-0.3
6,056,308	-		CA265_RS24830	0.11	-0.2
6,056,366	-		CA265_RS24830	0.14	-1.4
6,056,370	-		CA265_RS24830	0.14	+0.3
6,056,408	+		CA265_RS24830	0.16	-0.3
6,056,492	+		CA265_RS24830	0.20	-0.3
6,056,494	+		CA265_RS24830	0.20	+0.8
6,056,494	+		CA265_RS24830	0.20	-0.5
6,056,513	+		CA265_RS24830	0.21	+0.4
6,056,557	+		CA265_RS24830	0.24	+0.2
6,056,557	+		CA265_RS24830	0.24	+0.3
6,056,557	+		CA265_RS24830	0.24	+0.3
6,056,558	-		CA265_RS24830	0.24	-1.0
6,056,588	+		CA265_RS24830	0.25	-0.0
6,056,657	+		CA265_RS24830	0.29	+0.5
6,056,657	+		CA265_RS24830	0.29	-0.4
6,056,659	+		CA265_RS24830	0.29	-0.6
6,056,660	-		CA265_RS24830	0.29	+0.7
6,056,664	+		CA265_RS24830	0.29	+0.6
6,056,664	+		CA265_RS24830	0.29	-0.3
6,056,665	-		CA265_RS24830	0.29	-0.3
6,056,729	-		CA265_RS24830	0.32	+0.4
6,056,869	-		CA265_RS24830	0.40	+0.8
6,056,963	-		CA265_RS24830	0.44	-0.1
6,057,048	-		CA265_RS24830	0.49	-0.5
6,057,091	-		CA265_RS24830	0.51	+1.4
6,057,141	+		CA265_RS24830	0.54	+1.8
6,057,173	+		CA265_RS24830	0.55	-1.1
6,057,174	-		CA265_RS24830	0.55	-0.1
6,057,201	+		CA265_RS24830	0.57	-1.0
6,057,202	-		CA265_RS24830	0.57	+0.3
6,057,202	-		CA265_RS24830	0.57	-0.7
6,057,260	-		CA265_RS24830	0.60	-0.2
6,057,271	+		CA265_RS24830	0.60	-0.4
6,057,271	+		CA265_RS24830	0.60	-2.2
6,057,360	-		CA265_RS24830	0.65	-1.0
6,057,360	-				+0.8
6,057,399	+		CA265_RS24830	0.67	+1.4
6,057,402	+		CA265_RS24830	0.67	+0.1
6,057,402	+		CA265_RS24830	0.67	+0.4
6,057,403	-		CA265_RS24830	0.67	+0.8
6,057,431	-		CA265_RS24830	0.68	-0.2
6,057,431	-		CA265_RS24830	0.68	+0.6
6,057,435	+		CA265_RS24830	0.69	+0.6
6,057,436	-		CA265_RS24830	0.69	-0.5
6,057,532	-		CA265_RS24830	0.74	-1.8
6,057,588	+		CA265_RS24830	0.76	-0.5
6,057,612	+		CA265_RS24830	0.78	+0.1
6,057,685	-		CA265_RS24830	0.81	+0.7
6,057,746	+		CA265_RS24830	0.85	-0.2
6,057,747	-		CA265_RS24830	0.85	-0.4
6,057,788	+		CA265_RS24830	0.87	-0.2
6,057,788	+		CA265_RS24830	0.87	-0.1
6,057,789	-		CA265_RS24830	0.87	+0.1
6,057,797	+				+0.2
6,058,026	-				+0.5
6,058,036	-				+0.5
6,058,053	-				-0.1
6,058,078	+				+0.5
6,058,079	-				+0.9
6,058,148	+				-0.1
6,058,160	+				+0.1
6,058,210	+				+0.4
6,058,214	-				-1.8
6,058,259	-		CA265_RS24835	0.11	-0.4
6,058,259	-		CA265_RS24835	0.11	-1.3
6,058,268	+		CA265_RS24835	0.12	+2.3
6,058,281	+		CA265_RS24835	0.14	+0.6
6,058,316	+		CA265_RS24835	0.20	-0.5
6,058,339	+		CA265_RS24835	0.23	+1.1
6,058,398	+		CA265_RS24835	0.32	+0.8
6,058,434	+		CA265_RS24835	0.38	+0.8
6,058,477	+		CA265_RS24835	0.45	-0.9
6,058,477	+		CA265_RS24835	0.45	-0.5
6,058,478	-		CA265_RS24835	0.45	-0.3
6,058,523	+		CA265_RS24835	0.52	+0.1
6,058,574	-		CA265_RS24835	0.60	+0.1
6,058,574	-		CA265_RS24835	0.60	-0.6
6,058,656	+		CA265_RS24835	0.72	-0.7
6,058,656	+		CA265_RS24835	0.72	+0.1
6,058,675	+		CA265_RS24835	0.75	+0.4
6,058,711	+		CA265_RS24835	0.81	-0.8
6,058,711	+		CA265_RS24835	0.81	-0.3
6,058,712	-		CA265_RS24835	0.81	+1.1
6,058,712	-		CA265_RS24835	0.81	-0.6
6,058,757	-		CA265_RS24835	0.88	-0.4
6,058,785	-				+0.2
6,058,799	-				+1.3
6,058,811	-				+0.3
6,058,854	+				-0.1
6,058,854	+				-1.3
6,058,854	+				+0.8
6,058,855	-				-0.8
6,058,860	-				+0.7
6,058,887	+				-0.6