Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS24695

Experiment: D-Mannose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Mannose (C)
6,026,268	-		CA265_RS24690	0.54	+0.1
6,026,294	+		CA265_RS24690	0.56	-0.6
6,026,317	+		CA265_RS24690	0.58	-2.0
6,026,460	+		CA265_RS24690	0.67	+0.5
6,026,461	-		CA265_RS24690	0.67	-0.7
6,026,461	-		CA265_RS24690	0.67	+1.1
6,026,479	-		CA265_RS24690	0.68	-1.9
6,026,504	-		CA265_RS24690	0.69	+0.3
6,026,582	+		CA265_RS24690	0.74	-0.2
6,026,649	+		CA265_RS24690	0.79	+0.1
6,026,650	-		CA265_RS24690	0.79	+0.2
6,026,710	-		CA265_RS24690	0.82	-0.8
6,026,710	-		CA265_RS24690	0.82	+0.7
6,026,710	-		CA265_RS24690	0.82	+0.3
6,026,729	-		CA265_RS24690	0.84	-0.0
6,026,729	-		CA265_RS24690	0.84	+0.0
6,026,760	-		CA265_RS24690	0.86	-0.8
6,026,760	-		CA265_RS24690	0.86	+0.6
6,026,765	+		CA265_RS24690	0.86	-0.8
6,026,832	-				+0.9
6,026,837	-				+0.1
6,026,837	-				+0.5
6,026,837	-				-0.0
6,026,919	+				-0.5
6,026,922	-				+0.4
6,026,971	+				-1.3
6,026,982	-				-0.4
6,027,050	+				-0.2
6,027,059	+				+0.4
6,027,065	-				-0.4
6,027,098	+				+0.0
6,027,106	+				+1.3
6,027,107	-				+2.0
6,027,107	-				+0.3
6,027,220	+				-0.9
6,027,253	+				+0.2
6,027,254	-				-0.4
6,027,275	+				-0.7
6,027,350	+				+0.7
6,027,364	+				-0.3
6,027,504	+		CA265_RS24695	0.10	-1.8
6,027,550	+		CA265_RS24695	0.12	+0.9
6,027,550	+		CA265_RS24695	0.12	-0.3
6,027,755	-		CA265_RS24695	0.21	+1.1
6,027,782	+				-0.2
6,027,782	+		CA265_RS24695	0.22	-1.4
6,027,849	+		CA265_RS24695	0.25	-0.2
6,027,861	-		CA265_RS24695	0.25	+0.3
6,027,870	+		CA265_RS24695	0.26	+0.3
6,027,870	+		CA265_RS24695	0.26	-0.8
6,027,870	+		CA265_RS24695	0.26	+0.5
6,027,871	-		CA265_RS24695	0.26	+1.1
6,027,871	-		CA265_RS24695	0.26	+0.2
6,027,871	-		CA265_RS24695	0.26	+0.2
6,027,871	-		CA265_RS24695	0.26	+0.7
6,027,871	-		CA265_RS24695	0.26	+1.0
6,027,875	+		CA265_RS24695	0.26	+0.6
6,027,926	-		CA265_RS24695	0.28	-0.6
6,027,968	-		CA265_RS24695	0.30	+1.1
6,028,016	-		CA265_RS24695	0.32	+0.4
6,028,053	+		CA265_RS24695	0.34	+0.3
6,028,053	+		CA265_RS24695	0.34	+0.2
6,028,053	+		CA265_RS24695	0.34	-1.2
6,028,054	-		CA265_RS24695	0.34	+0.1
6,028,182	+		CA265_RS24695	0.39	-0.3
6,028,213	-		CA265_RS24695	0.41	-1.7
6,028,229	+		CA265_RS24695	0.41	+0.7
6,028,238	-		CA265_RS24695	0.42	-0.2
6,028,257	+		CA265_RS24695	0.42	-0.3
6,028,271	+		CA265_RS24695	0.43	+0.8
6,028,345	-		CA265_RS24695	0.46	-0.7
6,028,345	-		CA265_RS24695	0.46	-0.3
6,028,349	+		CA265_RS24695	0.46	+0.6
6,028,349	+		CA265_RS24695	0.46	-0.0
6,028,349	+		CA265_RS24695	0.46	-0.5
6,028,350	-		CA265_RS24695	0.46	-0.1
6,028,379	+		CA265_RS24695	0.48	+3.1
6,028,386	-		CA265_RS24695	0.48	+0.3
6,028,386	-		CA265_RS24695	0.48	-0.3
6,028,415	+		CA265_RS24695	0.49	+0.1
6,028,415	+		CA265_RS24695	0.49	+1.1
6,028,473	+		CA265_RS24695	0.52	-1.1
6,028,474	-		CA265_RS24695	0.52	+0.4
6,028,527	+		CA265_RS24695	0.54	+0.2
6,028,552	+		CA265_RS24695	0.55	+0.5
6,028,589	+		CA265_RS24695	0.57	+0.1
6,028,590	-		CA265_RS24695	0.57	+0.4
6,028,590	-		CA265_RS24695	0.57	-0.4
6,028,638	+		CA265_RS24695	0.59	-0.7
6,028,683	-		CA265_RS24695	0.61	-0.1
6,028,705	-		CA265_RS24695	0.62	-2.4
6,028,705	-		CA265_RS24695	0.62	+1.0
6,028,705	-		CA265_RS24695	0.62	-0.4
6,028,729	-		CA265_RS24695	0.63	-0.6
6,028,820	-		CA265_RS24695	0.67	-1.2
6,028,822	+				+0.8
6,028,823	-		CA265_RS24695	0.67	+1.2
6,028,851	-		CA265_RS24695	0.68	-0.2
6,028,943	+		CA265_RS24695	0.72	-0.8
6,028,944	-		CA265_RS24695	0.72	+0.7
6,028,952	-		CA265_RS24695	0.72	+0.2
6,028,967	+		CA265_RS24695	0.73	+0.6
6,029,009	+		CA265_RS24695	0.75	-0.8
6,029,012	-		CA265_RS24695	0.75	+0.5
6,029,046	-		CA265_RS24695	0.76	-0.3
6,029,103	+		CA265_RS24695	0.79	-1.3
6,029,115	+		CA265_RS24695	0.79	-0.5
6,029,150	+		CA265_RS24695	0.81	-0.0
6,029,154	+		CA265_RS24695	0.81	+0.9
6,029,154	+		CA265_RS24695	0.81	-0.2
6,029,170	-		CA265_RS24695	0.82	-2.5
6,029,187	-		CA265_RS24695	0.82	-0.5
6,029,222	+		CA265_RS24695	0.84	+2.8
6,029,319	+		CA265_RS24695	0.88	+0.2
6,029,476	+				-1.6
6,029,477	-				+0.2
6,029,546	-				+0.9
6,029,546	-				-0.4
6,029,591	-				+0.2
6,029,634	+				+0.5
6,029,722	+				-1.3
6,029,739	-				-0.7
6,029,763	+				+0.5
6,029,805	+				+0.2
6,029,806	-				-0.3
6,029,828	+				+0.4
6,029,829	-				-0.2
6,029,889	-				-0.3
6,029,921	-				-0.8
6,029,921	-				-0.6
6,029,957	-				-0.1
6,029,996	+				-0.5
6,029,997	-				-0.2
6,030,012	+				-0.0
6,030,091	-		CA265_RS24700	0.16	+0.1
6,030,133	-		CA265_RS24700	0.27	-1.4
6,030,140	+		CA265_RS24700	0.29	-0.7
6,030,141	-		CA265_RS24700	0.29	+2.1
6,030,141	-		CA265_RS24700	0.29	+0.8
6,030,220	+		CA265_RS24700	0.49	+0.8
6,030,221	-		CA265_RS24700	0.49	+0.2
6,030,223	-		CA265_RS24700	0.49	-1.4
6,030,334	+		CA265_RS24700	0.77	+0.7
6,030,335	-		CA265_RS24700	0.77	-0.1
6,030,344	-		CA265_RS24700	0.79	+0.8
6,030,378	+		CA265_RS24700	0.88	-0.7
6,030,379	-		CA265_RS24700	0.88	-2.3
6,030,553	+				+0.5