Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS21915

Experiment: D-Mannose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Mannose (C)
5,383,862	-		CA265_RS21910	0.37	+0.3
5,383,862	-		CA265_RS21910	0.37	+0.8
5,383,904	-		CA265_RS21910	0.39	+0.1
5,383,905	+		CA265_RS21910	0.39	-0.4
5,383,910	+		CA265_RS21910	0.40	+0.7
5,383,951	+		CA265_RS21910	0.42	-1.7
5,383,951	+		CA265_RS21910	0.42	+1.2
5,384,025	+		CA265_RS21910	0.47	-0.3
5,384,026	-		CA265_RS21910	0.47	-0.4
5,384,029	-		CA265_RS21910	0.47	+0.4
5,384,092	+		CA265_RS21910	0.51	+0.6
5,384,092	+		CA265_RS21910	0.51	+1.2
5,384,135	-		CA265_RS21910	0.54	+1.0
5,384,160	+		CA265_RS21910	0.56	+0.7
5,384,161	-		CA265_RS21910	0.56	-0.1
5,384,184	-		CA265_RS21910	0.57	+0.3
5,384,188	+		CA265_RS21910	0.58	+0.1
5,384,265	+		CA265_RS21910	0.63	-0.2
5,384,265	+		CA265_RS21910	0.63	-1.2
5,384,287	+		CA265_RS21910	0.64	-1.2
5,384,288	-		CA265_RS21910	0.64	+0.3
5,384,289	+		CA265_RS21910	0.64	-1.0
5,384,290	-		CA265_RS21910	0.64	-0.0
5,384,305	+		CA265_RS21910	0.65	+1.5
5,384,305	+		CA265_RS21910	0.65	-1.0
5,384,306	-		CA265_RS21910	0.65	+0.2
5,384,371	+		CA265_RS21910	0.70	+0.4
5,384,371	+		CA265_RS21910	0.70	-0.5
5,384,430	+		CA265_RS21910	0.73	-1.6
5,384,430	+		CA265_RS21910	0.73	+0.2
5,384,476	-		CA265_RS21910	0.76	+0.3
5,384,479	+		CA265_RS21910	0.77	+0.8
5,384,479	+		CA265_RS21910	0.77	+1.1
5,384,479	+		CA265_RS21910	0.77	+1.1
5,384,570	+		CA265_RS21910	0.82	+1.0
5,384,571	-		CA265_RS21910	0.82	+0.6
5,384,571	-		CA265_RS21910	0.82	+1.2
5,384,635	+		CA265_RS21910	0.87	-0.8
5,384,689	-				-0.4
5,384,694	-				+0.6
5,384,733	-				+0.5
5,384,751	+				-0.0
5,384,752	-				+0.1
5,384,840	-				-0.9
5,384,850	-				+0.1
5,384,904	+				+0.6
5,384,905	-				+0.6
5,384,905	-				+0.1
5,384,905	-				+0.4
5,384,958	+		CA265_RS21915	0.11	+1.3
5,385,009	+		CA265_RS21915	0.16	-0.7
5,385,010	-		CA265_RS21915	0.16	+0.7
5,385,010	-		CA265_RS21915	0.16	+0.2
5,385,016	-		CA265_RS21915	0.16	+0.3
5,385,087	+		CA265_RS21915	0.23	+0.2
5,385,133	-		CA265_RS21915	0.28	+0.2
5,385,136	-		CA265_RS21915	0.28	+1.0
5,385,213	+		CA265_RS21915	0.36	-0.1
5,385,214	-		CA265_RS21915	0.36	+0.0
5,385,217	-		CA265_RS21915	0.36	-0.0
5,385,227	-		CA265_RS21915	0.37	+0.1
5,385,230	-		CA265_RS21915	0.37	-0.0
5,385,271	+		CA265_RS21915	0.41	+0.2
5,385,283	-		CA265_RS21915	0.43	+1.5
5,385,286	+		CA265_RS21915	0.43	+2.1
5,385,291	+		CA265_RS21915	0.43	-0.1
5,385,361	-		CA265_RS21915	0.50	+0.1
5,385,409	+		CA265_RS21915	0.55	+0.1
5,385,430	+		CA265_RS21915	0.57	+0.6
5,385,431	-		CA265_RS21915	0.57	-0.3
5,385,431	-		CA265_RS21915	0.57	+1.7
5,385,431	-		CA265_RS21915	0.57	+0.7
5,385,432	+		CA265_RS21915	0.57	+2.0
5,385,432	+		CA265_RS21915	0.57	+0.1
5,385,454	-		CA265_RS21915	0.59	+1.0
5,385,515	-		CA265_RS21915	0.65	-1.3
5,385,538	+		CA265_RS21915	0.67	+0.3
5,385,539	-		CA265_RS21915	0.68	+0.3
5,385,547	+		CA265_RS21915	0.68	+0.4
5,385,548	-		CA265_RS21915	0.68	+1.0
5,385,579	-		CA265_RS21915	0.71	-1.0
5,385,582	+		CA265_RS21915	0.72	+0.6
5,385,622	-		CA265_RS21915	0.76	-0.3
5,385,633	+		CA265_RS21915	0.77	-0.2
5,385,634	-		CA265_RS21915	0.77	+0.4
5,385,634	-		CA265_RS21915	0.77	+0.4
5,385,634	-		CA265_RS21915	0.77	+1.3
5,385,655	+		CA265_RS21915	0.79	+0.2
5,385,656	-		CA265_RS21915	0.79	-0.2
5,385,671	-		CA265_RS21915	0.80	+0.2
5,385,671	-		CA265_RS21915	0.80	+0.5
5,385,671	-		CA265_RS21915	0.80	+0.7
5,385,718	-		CA265_RS21915	0.85	+1.2
5,385,795	+				+0.2
5,385,818	-				+1.4
5,385,826	-				+0.6
5,385,841	+				+0.2
5,385,848	+				+0.4
5,385,849	-				+0.2
5,385,851	-				-0.3
5,385,971	+				+0.4
5,386,001	-				-0.9
5,386,009	-				-3.7
5,386,020	+				-0.4
5,386,022	+				+0.1
5,386,048	+		CA265_RS21920	0.12	+0.2
5,386,048	+		CA265_RS21920	0.12	-1.6
5,386,141	+		CA265_RS21920	0.20	-2.3
5,386,241	+		CA265_RS21920	0.29	-0.9
5,386,242	-		CA265_RS21920	0.29	+0.1
5,386,246	+		CA265_RS21920	0.29	-1.0
5,386,247	-		CA265_RS21920	0.29	-1.2
5,386,247	-		CA265_RS21920	0.29	-1.9
5,386,250	+		CA265_RS21920	0.30	-0.6
5,386,250	+		CA265_RS21920	0.30	-0.7
5,386,250	+		CA265_RS21920	0.30	-0.0
5,386,251	-		CA265_RS21920	0.30	-0.3
5,386,350	+		CA265_RS21920	0.38	+0.2
5,386,363	+		CA265_RS21920	0.39	+0.7
5,386,406	-		CA265_RS21920	0.43	-0.1
5,386,406	-		CA265_RS21920	0.43	+1.1
5,386,406	-		CA265_RS21920	0.43	-0.8
5,386,426	+		CA265_RS21920	0.45	-0.3
5,386,427	-		CA265_RS21920	0.45	-2.1
5,386,431	+		CA265_RS21920	0.45	+1.8
5,386,432	-		CA265_RS21920	0.45	+1.1
5,386,476	+		CA265_RS21920	0.49	-0.9
5,386,576	+		CA265_RS21920	0.58	-0.2
5,386,601	-		CA265_RS21920	0.60	-0.2
5,386,634	-		CA265_RS21920	0.63	-0.1
5,386,651	-		CA265_RS21920	0.64	+0.2
5,386,725	+		CA265_RS21920	0.70	+1.1
5,386,725	+		CA265_RS21920	0.70	+0.3
5,386,790	+		CA265_RS21920	0.76	-2.1
5,386,795	+		CA265_RS21920	0.76	-1.7
5,386,797	+		CA265_RS21920	0.77	-0.2
5,386,798	-		CA265_RS21920	0.77	-0.0
5,386,819	+		CA265_RS21920	0.79	+0.6
5,386,819	+		CA265_RS21920	0.79	+0.7