Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS13070

Experiment: D-Mannose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Mannose (C)
3,253,204	+		CA265_RS13060	0.80	+0.1
3,253,205	-		CA265_RS13060	0.80	+0.5
3,253,205	-		CA265_RS13060	0.80	-0.8
3,253,205	-		CA265_RS13060	0.80	-0.2
3,253,205	-		CA265_RS13060	0.80	+0.1
3,253,227	-		CA265_RS13060	0.83	-0.1
3,253,227	-		CA265_RS13060	0.83	+0.1
3,253,261	-		CA265_RS13060	0.87	+0.5
3,253,292	+				+0.7
3,253,306	+				-0.2
3,253,504	-				+0.4
3,253,504	-				+0.3
3,253,506	+				+0.2
3,253,559	+				-0.2
3,253,560	-				+0.0
3,253,560	-				+0.6
3,253,601	-		CA265_RS13065	0.14	+0.8
3,253,704	+		CA265_RS13065	0.29	+1.6
3,253,769	+		CA265_RS13065	0.39	+0.3
3,253,899	-		CA265_RS13065	0.58	-0.5
3,253,958	-		CA265_RS13065	0.67	+0.6
3,253,969	+		CA265_RS13065	0.68	+0.7
3,253,980	-		CA265_RS13065	0.70	-0.5
3,254,130	+				+0.3
3,254,201	-				-0.5
3,254,226	+				-1.6
3,254,227	-				+0.1
3,254,249	+				-0.5
3,254,250	-				-0.4
3,254,250	-				+1.0
3,254,275	+				+0.1
3,254,318	-				-0.6
3,254,382	+				-0.6
3,254,382	+				-0.5
3,254,444	+		CA265_RS13070	0.11	+0.2
3,254,549	+		CA265_RS13070	0.16	+0.1
3,254,572	-		CA265_RS13070	0.17	-1.5
3,254,658	+		CA265_RS13070	0.20	-0.6
3,254,662	+		CA265_RS13070	0.21	+0.1
3,254,707	-		CA265_RS13070	0.23	-0.0
3,254,740	+		CA265_RS13070	0.24	+0.1
3,254,740	+		CA265_RS13070	0.24	-0.2
3,254,740	+		CA265_RS13070	0.24	+0.6
3,254,750	+		CA265_RS13070	0.24	+0.3
3,254,750	+		CA265_RS13070	0.24	-0.1
3,254,780	+		CA265_RS13070	0.26	-0.4
3,254,798	-		CA265_RS13070	0.27	+0.9
3,254,900	+		CA265_RS13070	0.31	-0.1
3,254,913	+		CA265_RS13070	0.32	-0.6
3,254,979	+		CA265_RS13070	0.35	+0.2
3,254,980	-		CA265_RS13070	0.35	-0.0
3,255,014	+		CA265_RS13070	0.36	-1.9
3,255,014	+		CA265_RS13070	0.36	-0.0
3,255,015	-		CA265_RS13070	0.36	-0.6
3,255,017	-		CA265_RS13070	0.36	-0.4
3,255,017	-		CA265_RS13070	0.36	+0.6
3,255,043	+		CA265_RS13070	0.38	-0.3
3,255,043	+		CA265_RS13070	0.38	+0.7
3,255,044	-		CA265_RS13070	0.38	+0.3
3,255,224	+		CA265_RS13070	0.46	-1.6
3,255,225	-		CA265_RS13070	0.46	-0.4
3,255,253	+		CA265_RS13070	0.47	-0.3
3,255,253	+		CA265_RS13070	0.47	+0.4
3,255,253	+		CA265_RS13070	0.47	+0.3
3,255,289	-		CA265_RS13070	0.48	-0.2
3,255,326	+		CA265_RS13070	0.50	+0.6
3,255,378	-		CA265_RS13070	0.52	-0.4
3,255,459	+		CA265_RS13070	0.56	-0.0
3,255,469	+		CA265_RS13070	0.56	+0.4
3,255,470	-		CA265_RS13070	0.56	+0.1
3,255,536	+		CA265_RS13070	0.59	-1.9
3,255,537	-		CA265_RS13070	0.59	+0.3
3,255,638	+		CA265_RS13070	0.64	+0.1
3,255,638	+				-0.9
3,255,642	+		CA265_RS13070	0.64	+0.5
3,255,643	-		CA265_RS13070	0.64	+0.1
3,255,643	-		CA265_RS13070	0.64	-0.1
3,255,643	-		CA265_RS13070	0.64	-0.6
3,255,679	+		CA265_RS13070	0.66	+1.0
3,255,680	-		CA265_RS13070	0.66	-0.2
3,255,680	-		CA265_RS13070	0.66	-0.9
3,255,711	-		CA265_RS13070	0.67	-1.2
3,255,785	+		CA265_RS13070	0.70	+0.7
3,255,860	-		CA265_RS13070	0.74	+0.1
3,255,915	-		CA265_RS13070	0.76	+0.1
3,255,917	+		CA265_RS13070	0.76	+0.6
3,255,959	-		CA265_RS13070	0.78	-0.6
3,256,104	+		CA265_RS13070	0.85	+0.3
3,256,105	-		CA265_RS13070	0.85	+1.6
3,256,122	+		CA265_RS13070	0.85	-0.0
3,256,123	-		CA265_RS13070	0.86	+0.3
3,256,123	-		CA265_RS13070	0.86	-0.4
3,256,127	+		CA265_RS13070	0.86	-0.5
3,256,127	+		CA265_RS13070	0.86	-0.3
3,256,135	-		CA265_RS13070	0.86	-0.2
3,256,147	-		CA265_RS13070	0.87	+1.0
3,256,292	+				+0.2
3,256,292	+				-0.6
3,256,293	-				-0.3
3,256,395	-				+1.0
3,256,455	+				+0.4
3,256,539	+				-1.5
3,256,558	-				+0.9
3,256,560	-				+0.1
3,256,588	-				-0.8
3,256,635	+				+0.4
3,256,656	-				-0.1
3,256,696	+				-0.8
3,256,696	+				-0.1
3,256,714	+				-0.1
3,256,721	-				-0.4
3,256,721	-				+0.5
3,256,742	-				-0.3
3,256,833	+		CA265_RS13075	0.13	-2.5
3,256,833	+		CA265_RS13075	0.13	-0.7
3,256,835	+		CA265_RS13075	0.13	-0.1
3,256,835	+		CA265_RS13075	0.13	-0.8
3,256,836	-		CA265_RS13075	0.13	-0.1
3,256,842	-		CA265_RS13075	0.14	-0.0
3,256,851	+		CA265_RS13075	0.14	-1.5
3,256,936	+		CA265_RS13075	0.21	-0.3
3,257,009	+		CA265_RS13075	0.27	+0.1
3,257,009	+		CA265_RS13075	0.27	-0.2
3,257,010	-		CA265_RS13075	0.27	-0.1
3,257,011	+		CA265_RS13075	0.27	-0.4
3,257,053	+		CA265_RS13075	0.30	-0.1
3,257,148	+		CA265_RS13075	0.38	-1.4
3,257,149	-		CA265_RS13075	0.38	-1.3
3,257,149	-		CA265_RS13075	0.38	+0.0
3,257,157	+		CA265_RS13075	0.39	+0.6
3,257,217	+		CA265_RS13075	0.43	-1.0
3,257,227	-		CA265_RS13075	0.44	-0.1
3,257,227	-		CA265_RS13075	0.44	-0.5
3,257,237	-		CA265_RS13075	0.45	-0.2
3,257,237	-		CA265_RS13075	0.45	+0.1
3,257,262	+		CA265_RS13075	0.47	+0.1
3,257,263	-		CA265_RS13075	0.47	-0.7
3,257,320	+		CA265_RS13075	0.52	+0.3
3,257,338	+		CA265_RS13075	0.53	+0.6
3,257,364	-		CA265_RS13075	0.55	+0.2
3,257,381	+		CA265_RS13075	0.56	+0.4
3,257,394	+		CA265_RS13075	0.58	+0.0
3,257,413	-		CA265_RS13075	0.59	+0.3
3,257,416	+		CA265_RS13075	0.59	+0.5
3,257,417	-		CA265_RS13075	0.59	+0.3
3,257,417	-		CA265_RS13075	0.59	-2.8
3,257,417	-		CA265_RS13075	0.59	-1.5
3,257,417	-		CA265_RS13075	0.59	+0.2
3,257,437	-		CA265_RS13075	0.61	-0.9