Experiment: D-Mannose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS03630 and CA265_RS03635 are separated by 106 nucleotides CA265_RS03635 and CA265_RS03640 are separated by 49 nucleotides
CA265_RS03630: CA265_RS03630 - histidinol-phosphate transaminase, at 867,134 to 868,174
_RS03630
CA265_RS03635: CA265_RS03635 - histidinol dehydrogenase, at 868,281 to 869,561
_RS03635
CA265_RS03640: CA265_RS03640 - ATP phosphoribosyltransferase, at 869,611 to 870,462
_RS03640
Position (kb) 868
869
870 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 867.363 kb on - strand, within CA265_RS03630 at 867.465 kb on + strand, within CA265_RS03630 at 867.465 kb on + strand, within CA265_RS03630 at 867.466 kb on - strand, within CA265_RS03630 at 867.567 kb on - strand, within CA265_RS03630 at 867.628 kb on + strand, within CA265_RS03630 at 867.633 kb on + strand, within CA265_RS03630 at 867.662 kb on - strand, within CA265_RS03630 at 867.686 kb on - strand, within CA265_RS03630 at 867.833 kb on + strand, within CA265_RS03630 at 867.834 kb on - strand, within CA265_RS03630 at 867.853 kb on - strand, within CA265_RS03630 at 867.853 kb on - strand, within CA265_RS03630 at 867.921 kb on - strand, within CA265_RS03630 at 867.981 kb on - strand, within CA265_RS03630 at 868.158 kb on - strand at 868.224 kb on - strand at 868.225 kb on + strand at 868.225 kb on + strand at 868.225 kb on + strand at 868.228 kb on - strand at 868.264 kb on + strand at 868.313 kb on + strand at 868.362 kb on + strand at 868.363 kb on - strand at 868.425 kb on - strand, within CA265_RS03635 at 868.469 kb on + strand, within CA265_RS03635 at 868.469 kb on + strand, within CA265_RS03635 at 868.470 kb on - strand, within CA265_RS03635 at 868.470 kb on - strand, within CA265_RS03635 at 868.545 kb on - strand, within CA265_RS03635 at 868.556 kb on + strand, within CA265_RS03635 at 868.578 kb on - strand, within CA265_RS03635 at 868.644 kb on + strand, within CA265_RS03635 at 868.766 kb on + strand, within CA265_RS03635 at 868.855 kb on - strand, within CA265_RS03635 at 868.877 kb on + strand, within CA265_RS03635 at 868.887 kb on + strand, within CA265_RS03635 at 868.888 kb on - strand, within CA265_RS03635 at 868.949 kb on + strand, within CA265_RS03635 at 868.949 kb on + strand, within CA265_RS03635 at 868.951 kb on + strand, within CA265_RS03635 at 868.952 kb on - strand, within CA265_RS03635 at 868.954 kb on - strand at 869.013 kb on + strand, within CA265_RS03635 at 869.013 kb on + strand, within CA265_RS03635 at 869.060 kb on - strand, within CA265_RS03635 at 869.161 kb on - strand, within CA265_RS03635 at 869.186 kb on - strand, within CA265_RS03635 at 869.815 kb on + strand, within CA265_RS03640 at 869.815 kb on + strand, within CA265_RS03640 at 869.816 kb on - strand, within CA265_RS03640 at 869.825 kb on + strand, within CA265_RS03640 at 869.826 kb on - strand, within CA265_RS03640 at 869.848 kb on + strand, within CA265_RS03640 at 869.968 kb on + strand, within CA265_RS03640 at 869.987 kb on - strand, within CA265_RS03640 at 869.987 kb on - strand, within CA265_RS03640 at 870.017 kb on - strand, within CA265_RS03640 at 870.034 kb on + strand, within CA265_RS03640 at 870.108 kb on - strand, within CA265_RS03640 at 870.120 kb on + strand, within CA265_RS03640 at 870.239 kb on - strand, within CA265_RS03640 at 870.286 kb on + strand, within CA265_RS03640 at 870.383 kb on - strand at 870.401 kb on - strand at 870.401 kb on - strand at 870.473 kb on - strand at 870.474 kb on + strand at 870.530 kb on - strand at 870.556 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Mannose (C) remove 867,363 - CA265_RS03630 0.22 -3.8 867,465 + CA265_RS03630 0.32 -2.8 867,465 + CA265_RS03630 0.32 -1.8 867,466 - CA265_RS03630 0.32 -2.5 867,567 - CA265_RS03630 0.42 -3.3 867,628 + CA265_RS03630 0.47 -3.5 867,633 + CA265_RS03630 0.48 -2.5 867,662 - CA265_RS03630 0.51 -3.0 867,686 - CA265_RS03630 0.53 -2.3 867,833 + CA265_RS03630 0.67 -3.0 867,834 - CA265_RS03630 0.67 -4.8 867,853 - CA265_RS03630 0.69 -0.3 867,853 - CA265_RS03630 0.69 -3.9 867,921 - CA265_RS03630 0.76 -2.7 867,981 - CA265_RS03630 0.81 -4.3 868,158 - -5.3 868,224 - -0.2 868,225 + -1.2 868,225 + -0.6 868,225 + -1.8 868,228 - -0.3 868,264 + -1.3 868,313 + -4.6 868,362 + -4.0 868,363 - -3.1 868,425 - CA265_RS03635 0.11 -4.0 868,469 + CA265_RS03635 0.15 -3.9 868,469 + CA265_RS03635 0.15 -2.9 868,470 - CA265_RS03635 0.15 -3.6 868,470 - CA265_RS03635 0.15 -5.4 868,545 - CA265_RS03635 0.21 -3.5 868,556 + CA265_RS03635 0.21 -4.7 868,578 - CA265_RS03635 0.23 -1.7 868,644 + CA265_RS03635 0.28 -1.2 868,766 + CA265_RS03635 0.38 -2.9 868,855 - CA265_RS03635 0.45 -1.9 868,877 + CA265_RS03635 0.47 -2.6 868,887 + CA265_RS03635 0.47 -3.4 868,888 - CA265_RS03635 0.47 -1.9 868,949 + CA265_RS03635 0.52 -3.1 868,949 + CA265_RS03635 0.52 -5.7 868,951 + CA265_RS03635 0.52 -2.6 868,952 - CA265_RS03635 0.52 -1.6 868,954 - -0.3 869,013 + CA265_RS03635 0.57 -2.1 869,013 + CA265_RS03635 0.57 -1.8 869,060 - CA265_RS03635 0.61 -2.2 869,161 - CA265_RS03635 0.69 -4.4 869,186 - CA265_RS03635 0.71 -4.0 869,815 + CA265_RS03640 0.24 -3.3 869,815 + CA265_RS03640 0.24 -2.2 869,816 - CA265_RS03640 0.24 -2.7 869,825 + CA265_RS03640 0.25 -1.6 869,826 - CA265_RS03640 0.25 -0.7 869,848 + CA265_RS03640 0.28 -2.3 869,968 + CA265_RS03640 0.42 -4.3 869,987 - CA265_RS03640 0.44 -0.6 869,987 - CA265_RS03640 0.44 -2.8 870,017 - CA265_RS03640 0.48 -4.1 870,034 + CA265_RS03640 0.50 -4.9 870,108 - CA265_RS03640 0.58 -2.6 870,120 + CA265_RS03640 0.60 -4.9 870,239 - CA265_RS03640 0.74 -2.5 870,286 + CA265_RS03640 0.79 -3.5 870,383 - -4.2 870,401 - -3.8 870,401 - -4.1 870,473 - -2.3 870,474 + -3.1 870,530 - -0.3 870,556 - +0.6
Or see this region's nucleotide sequence