Experiment: D-Mannose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS02445 and CA265_RS02450 are separated by 81 nucleotides CA265_RS02450 and CA265_RS02455 are separated by 80 nucleotides
CA265_RS02445: CA265_RS02445 - peptidase C69, at 604,093 to 605,433
_RS02445
CA265_RS02450: CA265_RS02450 - hypothetical protein, at 605,515 to 606,303
_RS02450
CA265_RS02455: CA265_RS02455 - Fe-S oxidoreductase, at 606,384 to 607,679
_RS02455
Position (kb) 605
606
607 Strain fitness (log2 ratio) -2
-1
0
1 at 604.516 kb on - strand, within CA265_RS02445 at 604.583 kb on + strand, within CA265_RS02445 at 604.584 kb on - strand, within CA265_RS02445 at 604.597 kb on - strand, within CA265_RS02445 at 604.597 kb on - strand, within CA265_RS02445 at 604.597 kb on - strand, within CA265_RS02445 at 604.618 kb on - strand, within CA265_RS02445 at 604.684 kb on - strand, within CA265_RS02445 at 604.714 kb on - strand, within CA265_RS02445 at 604.714 kb on - strand, within CA265_RS02445 at 604.714 kb on - strand, within CA265_RS02445 at 604.715 kb on + strand, within CA265_RS02445 at 604.715 kb on + strand, within CA265_RS02445 at 604.715 kb on + strand, within CA265_RS02445 at 604.773 kb on + strand, within CA265_RS02445 at 604.774 kb on - strand, within CA265_RS02445 at 604.780 kb on - strand, within CA265_RS02445 at 604.785 kb on - strand, within CA265_RS02445 at 604.966 kb on - strand, within CA265_RS02445 at 604.966 kb on - strand, within CA265_RS02445 at 605.021 kb on + strand, within CA265_RS02445 at 605.156 kb on + strand, within CA265_RS02445 at 605.156 kb on + strand, within CA265_RS02445 at 605.157 kb on - strand, within CA265_RS02445 at 605.157 kb on - strand, within CA265_RS02445 at 605.177 kb on - strand, within CA265_RS02445 at 605.190 kb on - strand, within CA265_RS02445 at 605.190 kb on - strand, within CA265_RS02445 at 605.259 kb on + strand, within CA265_RS02445 at 605.260 kb on - strand, within CA265_RS02445 at 605.302 kb on - strand at 605.348 kb on + strand at 605.372 kb on - strand at 605.442 kb on + strand at 605.454 kb on + strand at 605.455 kb on - strand at 606.310 kb on - strand at 606.317 kb on - strand at 606.330 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Mannose (C) remove 604,516 - CA265_RS02445 0.32 +0.2 604,583 + CA265_RS02445 0.37 -2.0 604,584 - CA265_RS02445 0.37 +0.5 604,597 - CA265_RS02445 0.38 -0.1 604,597 - CA265_RS02445 0.38 +0.8 604,597 - CA265_RS02445 0.38 +0.6 604,618 - CA265_RS02445 0.39 +0.3 604,684 - CA265_RS02445 0.44 +0.4 604,714 - CA265_RS02445 0.46 -2.0 604,714 - CA265_RS02445 0.46 -1.0 604,714 - CA265_RS02445 0.46 +0.2 604,715 + CA265_RS02445 0.46 -0.1 604,715 + CA265_RS02445 0.46 -0.0 604,715 + CA265_RS02445 0.46 +0.4 604,773 + CA265_RS02445 0.51 -1.6 604,774 - CA265_RS02445 0.51 -0.0 604,780 - CA265_RS02445 0.51 +0.9 604,785 - CA265_RS02445 0.52 +0.3 604,966 - CA265_RS02445 0.65 +1.1 604,966 - CA265_RS02445 0.65 -0.5 605,021 + CA265_RS02445 0.69 -0.1 605,156 + CA265_RS02445 0.79 -0.4 605,156 + CA265_RS02445 0.79 +0.8 605,157 - CA265_RS02445 0.79 +0.4 605,157 - CA265_RS02445 0.79 -0.0 605,177 - CA265_RS02445 0.81 +0.2 605,190 - CA265_RS02445 0.82 -0.6 605,190 - CA265_RS02445 0.82 -0.5 605,259 + CA265_RS02445 0.87 +0.7 605,260 - CA265_RS02445 0.87 +0.1 605,302 - +0.2 605,348 + +0.5 605,372 - +0.0 605,442 + +0.4 605,454 + -0.2 605,455 - -0.7 606,310 - -0.1 606,317 - -0.2 606,330 - +0.1
Or see this region's nucleotide sequence