Experiment: L-Arginine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_22875 and AO356_22880 are separated by 41 nucleotides AO356_22880 and AO356_22885 are separated by 371 nucleotides
AO356_22875: AO356_22875 - chemotaxis protein, at 5,105,575 to 5,107,200
_22875
AO356_22880: AO356_22880 - aspartate aminotransferase, at 5,107,242 to 5,108,429
_22880
AO356_22885: AO356_22885 - hypothetical protein, at 5,108,801 to 5,109,604
_22885
Position (kb)
5107
5108
5109 Strain fitness (log2 ratio)
-1
0
1 at 5107.203 kb on + strand at 5107.204 kb on - strand at 5107.239 kb on + strand at 5107.239 kb on + strand at 5107.239 kb on + strand at 5107.239 kb on + strand at 5107.239 kb on + strand at 5107.239 kb on + strand at 5107.239 kb on + strand at 5107.240 kb on - strand at 5107.240 kb on - strand at 5107.240 kb on - strand at 5107.240 kb on - strand at 5107.240 kb on - strand at 5107.240 kb on - strand at 5107.298 kb on + strand at 5107.435 kb on - strand, within AO356_22880 at 5107.511 kb on - strand, within AO356_22880 at 5107.617 kb on + strand, within AO356_22880 at 5107.617 kb on + strand, within AO356_22880 at 5107.617 kb on + strand, within AO356_22880 at 5107.617 kb on + strand, within AO356_22880 at 5107.617 kb on + strand, within AO356_22880 at 5107.618 kb on - strand, within AO356_22880 at 5107.618 kb on - strand, within AO356_22880 at 5107.618 kb on - strand, within AO356_22880 at 5107.618 kb on - strand, within AO356_22880 at 5107.618 kb on - strand, within AO356_22880 at 5107.626 kb on + strand, within AO356_22880 at 5107.626 kb on + strand, within AO356_22880 at 5107.627 kb on - strand, within AO356_22880 at 5107.860 kb on + strand, within AO356_22880 at 5107.860 kb on + strand, within AO356_22880 at 5107.861 kb on - strand, within AO356_22880 at 5107.861 kb on - strand, within AO356_22880 at 5107.861 kb on - strand, within AO356_22880 at 5107.861 kb on - strand, within AO356_22880 at 5107.875 kb on + strand, within AO356_22880 at 5107.875 kb on + strand, within AO356_22880 at 5107.875 kb on + strand, within AO356_22880 at 5107.875 kb on + strand, within AO356_22880 at 5107.876 kb on - strand, within AO356_22880 at 5107.876 kb on - strand, within AO356_22880 at 5108.277 kb on + strand, within AO356_22880 at 5108.331 kb on - strand at 5108.472 kb on + strand at 5108.473 kb on - strand at 5108.476 kb on + strand at 5108.476 kb on + strand at 5108.477 kb on - strand at 5108.477 kb on - strand at 5108.477 kb on - strand at 5108.513 kb on + strand at 5108.524 kb on - strand at 5108.547 kb on + strand at 5108.569 kb on - strand at 5108.624 kb on + strand at 5108.625 kb on - strand at 5108.796 kb on + strand at 5108.796 kb on + strand at 5108.796 kb on + strand at 5108.797 kb on - strand at 5108.800 kb on + strand at 5108.800 kb on + strand at 5108.801 kb on - strand at 5108.801 kb on - strand at 5108.881 kb on + strand at 5108.881 kb on + strand at 5108.882 kb on - strand, within AO356_22885 at 5109.013 kb on - strand, within AO356_22885 at 5109.015 kb on + strand, within AO356_22885 at 5109.016 kb on - strand, within AO356_22885 at 5109.016 kb on - strand, within AO356_22885 at 5109.057 kb on + strand, within AO356_22885 at 5109.057 kb on + strand, within AO356_22885 at 5109.061 kb on + strand, within AO356_22885 at 5109.062 kb on - strand, within AO356_22885 at 5109.146 kb on + strand, within AO356_22885 at 5109.175 kb on - strand, within AO356_22885 at 5109.231 kb on - strand, within AO356_22885 at 5109.324 kb on + strand, within AO356_22885
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (C) remove 5,107,203 + -0.6 5,107,204 - +0.4 5,107,239 + +0.2 5,107,239 + +1.3 5,107,239 + +0.3 5,107,239 + -0.8 5,107,239 + -0.8 5,107,239 + +1.5 5,107,239 + +0.5 5,107,240 - +0.1 5,107,240 - +0.4 5,107,240 - -0.8 5,107,240 - +0.6 5,107,240 - +0.2 5,107,240 - +1.0 5,107,298 + -0.5 5,107,435 - AO356_22880 0.16 +0.1 5,107,511 - AO356_22880 0.23 -0.3 5,107,617 + AO356_22880 0.32 +0.3 5,107,617 + AO356_22880 0.32 +0.0 5,107,617 + AO356_22880 0.32 -0.0 5,107,617 + AO356_22880 0.32 -0.2 5,107,617 + AO356_22880 0.32 -0.6 5,107,618 - AO356_22880 0.32 +0.3 5,107,618 - AO356_22880 0.32 +0.0 5,107,618 - AO356_22880 0.32 -0.1 5,107,618 - AO356_22880 0.32 -0.5 5,107,618 - AO356_22880 0.32 +0.2 5,107,626 + AO356_22880 0.32 -0.9 5,107,626 + AO356_22880 0.32 +0.6 5,107,627 - AO356_22880 0.32 +1.0 5,107,860 + AO356_22880 0.52 -0.4 5,107,860 + AO356_22880 0.52 +0.0 5,107,861 - AO356_22880 0.52 +0.0 5,107,861 - AO356_22880 0.52 -0.2 5,107,861 - AO356_22880 0.52 -0.4 5,107,861 - AO356_22880 0.52 +0.0 5,107,875 + AO356_22880 0.53 +0.0 5,107,875 + AO356_22880 0.53 -0.5 5,107,875 + AO356_22880 0.53 +0.1 5,107,875 + AO356_22880 0.53 +0.8 5,107,876 - AO356_22880 0.53 +0.2 5,107,876 - AO356_22880 0.53 +0.4 5,108,277 + AO356_22880 0.87 +0.0 5,108,331 - -1.1 5,108,472 + +0.5 5,108,473 - +0.1 5,108,476 + -0.5 5,108,476 + +0.3 5,108,477 - +1.0 5,108,477 - +0.7 5,108,477 - +0.3 5,108,513 + -0.4 5,108,524 - +0.5 5,108,547 + +0.1 5,108,569 - -0.3 5,108,624 + +1.5 5,108,625 - -0.3 5,108,796 + +0.9 5,108,796 + +0.3 5,108,796 + +0.5 5,108,797 - +0.5 5,108,800 + +0.4 5,108,800 + +0.1 5,108,801 - +0.2 5,108,801 - -0.7 5,108,881 + +0.7 5,108,881 + -0.3 5,108,882 - AO356_22885 0.10 +0.6 5,109,013 - AO356_22885 0.26 +1.5 5,109,015 + AO356_22885 0.27 +0.5 5,109,016 - AO356_22885 0.27 -1.3 5,109,016 - AO356_22885 0.27 -0.8 5,109,057 + AO356_22885 0.32 +0.4 5,109,057 + AO356_22885 0.32 +0.5 5,109,061 + AO356_22885 0.32 +0.3 5,109,062 - AO356_22885 0.32 +0.5 5,109,146 + AO356_22885 0.43 +0.5 5,109,175 - AO356_22885 0.47 -0.0 5,109,231 - AO356_22885 0.53 +0.3 5,109,324 + AO356_22885 0.65 +1.4
Or see this region's nucleotide sequence