Experiment: L-Arginine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_21245 and AO356_21250 are separated by 12 nucleotides AO356_21250 and AO356_21255 are separated by 273 nucleotides
AO356_21245: AO356_21245 - cytosine deaminase, at 4,767,732 to 4,768,979
_21245
AO356_21250: AO356_21250 - cytosine permease, at 4,768,992 to 4,770,263
_21250
AO356_21255: AO356_21255 - alpha/beta hydrolase, at 4,770,537 to 4,771,367
_21255
Position (kb)
4768
4769
4770
4771 Strain fitness (log2 ratio)
-1
0
1
2 at 4768.225 kb on + strand, within AO356_21245 at 4768.226 kb on - strand, within AO356_21245 at 4768.433 kb on - strand, within AO356_21245 at 4768.433 kb on - strand, within AO356_21245 at 4768.993 kb on + strand at 4768.995 kb on + strand at 4768.995 kb on + strand at 4768.995 kb on + strand at 4768.995 kb on + strand at 4768.995 kb on + strand at 4768.996 kb on - strand at 4768.996 kb on - strand at 4768.996 kb on - strand at 4769.005 kb on - strand at 4769.005 kb on - strand at 4769.027 kb on + strand at 4769.046 kb on + strand at 4769.053 kb on + strand at 4769.053 kb on + strand at 4769.053 kb on + strand at 4769.053 kb on + strand at 4769.053 kb on + strand at 4769.053 kb on + strand at 4769.053 kb on + strand at 4769.053 kb on + strand at 4769.054 kb on - strand at 4769.054 kb on - strand at 4769.054 kb on - strand at 4769.054 kb on - strand at 4769.054 kb on - strand at 4769.054 kb on - strand at 4769.054 kb on - strand at 4769.270 kb on - strand, within AO356_21250 at 4769.270 kb on - strand, within AO356_21250 at 4769.287 kb on + strand, within AO356_21250 at 4769.287 kb on + strand, within AO356_21250 at 4769.287 kb on + strand, within AO356_21250 at 4769.287 kb on + strand, within AO356_21250 at 4769.287 kb on + strand, within AO356_21250 at 4769.287 kb on + strand, within AO356_21250 at 4769.287 kb on + strand, within AO356_21250 at 4769.287 kb on + strand, within AO356_21250 at 4769.288 kb on - strand, within AO356_21250 at 4769.288 kb on - strand, within AO356_21250 at 4769.288 kb on - strand, within AO356_21250 at 4769.288 kb on - strand, within AO356_21250 at 4769.288 kb on - strand, within AO356_21250 at 4769.288 kb on - strand, within AO356_21250 at 4769.288 kb on - strand, within AO356_21250 at 4769.291 kb on + strand, within AO356_21250 at 4769.291 kb on + strand, within AO356_21250 at 4769.292 kb on - strand, within AO356_21250 at 4769.292 kb on - strand, within AO356_21250 at 4769.392 kb on + strand, within AO356_21250 at 4769.392 kb on + strand, within AO356_21250 at 4769.392 kb on + strand, within AO356_21250 at 4769.392 kb on + strand, within AO356_21250 at 4769.392 kb on + strand, within AO356_21250 at 4769.392 kb on + strand, within AO356_21250 at 4769.481 kb on + strand, within AO356_21250 at 4769.481 kb on + strand, within AO356_21250 at 4769.482 kb on - strand, within AO356_21250 at 4769.497 kb on + strand, within AO356_21250 at 4769.497 kb on + strand, within AO356_21250 at 4769.498 kb on - strand, within AO356_21250 at 4769.685 kb on - strand, within AO356_21250 at 4769.772 kb on + strand, within AO356_21250 at 4769.773 kb on - strand, within AO356_21250 at 4769.782 kb on + strand, within AO356_21250 at 4769.782 kb on + strand, within AO356_21250 at 4769.783 kb on - strand, within AO356_21250 at 4769.783 kb on - strand, within AO356_21250 at 4769.815 kb on + strand, within AO356_21250 at 4769.815 kb on + strand, within AO356_21250 at 4769.887 kb on + strand, within AO356_21250 at 4769.888 kb on - strand, within AO356_21250 at 4769.929 kb on + strand, within AO356_21250 at 4770.041 kb on - strand, within AO356_21250 at 4770.058 kb on + strand, within AO356_21250 at 4770.058 kb on + strand, within AO356_21250 at 4770.236 kb on - strand at 4770.236 kb on - strand at 4770.333 kb on + strand at 4770.333 kb on + strand at 4770.333 kb on + strand at 4770.333 kb on + strand at 4770.334 kb on - strand at 4770.334 kb on - strand at 4770.337 kb on + strand at 4770.337 kb on + strand at 4770.338 kb on - strand at 4770.339 kb on + strand at 4770.340 kb on - strand at 4770.838 kb on + strand, within AO356_21255 at 4770.838 kb on + strand, within AO356_21255 at 4770.889 kb on + strand, within AO356_21255 at 4770.889 kb on + strand, within AO356_21255 at 4770.889 kb on + strand, within AO356_21255 at 4770.890 kb on - strand, within AO356_21255 at 4770.890 kb on - strand, within AO356_21255 at 4770.890 kb on - strand, within AO356_21255 at 4770.890 kb on - strand, within AO356_21255 at 4770.964 kb on - strand, within AO356_21255 at 4770.964 kb on - strand, within AO356_21255 at 4770.964 kb on - strand, within AO356_21255 at 4770.964 kb on - strand, within AO356_21255 at 4770.964 kb on - strand, within AO356_21255 at 4770.964 kb on - strand, within AO356_21255 at 4771.201 kb on + strand, within AO356_21255 at 4771.202 kb on - strand, within AO356_21255 at 4771.202 kb on - strand, within AO356_21255 at 4771.202 kb on - strand, within AO356_21255 at 4771.252 kb on + strand, within AO356_21255 at 4771.253 kb on - strand, within AO356_21255 at 4771.253 kb on - strand, within AO356_21255 at 4771.253 kb on - strand, within AO356_21255
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (C) remove 4,768,225 + AO356_21245 0.40 +0.0 4,768,226 - AO356_21245 0.40 +0.5 4,768,433 - AO356_21245 0.56 -1.4 4,768,433 - AO356_21245 0.56 -1.0 4,768,993 + +0.7 4,768,995 + +1.2 4,768,995 + -0.1 4,768,995 + -0.0 4,768,995 + +1.4 4,768,995 + -0.5 4,768,996 - +0.4 4,768,996 - +0.9 4,768,996 - +0.8 4,769,005 - -0.1 4,769,005 - -0.2 4,769,027 + -0.5 4,769,046 + +0.7 4,769,053 + +0.1 4,769,053 + +0.4 4,769,053 + +0.1 4,769,053 + -0.6 4,769,053 + +0.4 4,769,053 + +0.3 4,769,053 + +0.6 4,769,053 + +0.4 4,769,054 - +0.1 4,769,054 - -0.2 4,769,054 - -0.2 4,769,054 - -0.1 4,769,054 - +0.5 4,769,054 - +1.8 4,769,054 - +0.9 4,769,270 - AO356_21250 0.22 +0.6 4,769,270 - AO356_21250 0.22 +0.2 4,769,287 + AO356_21250 0.23 -0.5 4,769,287 + AO356_21250 0.23 -0.3 4,769,287 + AO356_21250 0.23 -1.2 4,769,287 + AO356_21250 0.23 +0.8 4,769,287 + AO356_21250 0.23 -0.3 4,769,287 + AO356_21250 0.23 -0.2 4,769,287 + AO356_21250 0.23 -0.7 4,769,287 + AO356_21250 0.23 +0.1 4,769,288 - AO356_21250 0.23 +1.1 4,769,288 - AO356_21250 0.23 -0.1 4,769,288 - AO356_21250 0.23 -1.4 4,769,288 - AO356_21250 0.23 +0.2 4,769,288 - AO356_21250 0.23 -0.3 4,769,288 - AO356_21250 0.23 +0.5 4,769,288 - AO356_21250 0.23 +0.7 4,769,291 + AO356_21250 0.24 +0.8 4,769,291 + AO356_21250 0.24 +0.0 4,769,292 - AO356_21250 0.24 -1.6 4,769,292 - AO356_21250 0.24 +0.9 4,769,392 + AO356_21250 0.31 +0.3 4,769,392 + AO356_21250 0.31 -0.8 4,769,392 + AO356_21250 0.31 +0.1 4,769,392 + AO356_21250 0.31 +0.2 4,769,392 + AO356_21250 0.31 -0.5 4,769,392 + AO356_21250 0.31 -0.7 4,769,481 + AO356_21250 0.38 -0.2 4,769,481 + AO356_21250 0.38 +0.5 4,769,482 - AO356_21250 0.39 +0.5 4,769,497 + AO356_21250 0.40 -0.5 4,769,497 + AO356_21250 0.40 +0.1 4,769,498 - AO356_21250 0.40 -0.0 4,769,685 - AO356_21250 0.54 -1.2 4,769,772 + AO356_21250 0.61 -1.3 4,769,773 - AO356_21250 0.61 +0.3 4,769,782 + AO356_21250 0.62 +0.3 4,769,782 + AO356_21250 0.62 +1.1 4,769,783 - AO356_21250 0.62 -0.5 4,769,783 - AO356_21250 0.62 -0.7 4,769,815 + AO356_21250 0.65 +0.5 4,769,815 + AO356_21250 0.65 -0.1 4,769,887 + AO356_21250 0.70 -0.5 4,769,888 - AO356_21250 0.70 -0.3 4,769,929 + AO356_21250 0.74 -0.2 4,770,041 - AO356_21250 0.82 +0.0 4,770,058 + AO356_21250 0.84 +1.0 4,770,058 + AO356_21250 0.84 +0.1 4,770,236 - +0.2 4,770,236 - -0.1 4,770,333 + +0.9 4,770,333 + +0.1 4,770,333 + -0.1 4,770,333 + +0.4 4,770,334 - +0.9 4,770,334 - +0.6 4,770,337 + +0.2 4,770,337 + -0.5 4,770,338 - -0.9 4,770,339 + +0.2 4,770,340 - -1.0 4,770,838 + AO356_21255 0.36 -0.2 4,770,838 + AO356_21255 0.36 +0.0 4,770,889 + AO356_21255 0.42 +0.1 4,770,889 + AO356_21255 0.42 -0.4 4,770,889 + AO356_21255 0.42 -0.0 4,770,890 - AO356_21255 0.42 -0.2 4,770,890 - AO356_21255 0.42 +1.2 4,770,890 - AO356_21255 0.42 +0.5 4,770,890 - AO356_21255 0.42 +0.6 4,770,964 - AO356_21255 0.51 -0.0 4,770,964 - AO356_21255 0.51 -0.2 4,770,964 - AO356_21255 0.51 -0.3 4,770,964 - AO356_21255 0.51 +0.4 4,770,964 - AO356_21255 0.51 -0.2 4,770,964 - AO356_21255 0.51 -0.1 4,771,201 + AO356_21255 0.80 +0.4 4,771,202 - AO356_21255 0.80 -0.1 4,771,202 - AO356_21255 0.80 +0.6 4,771,202 - AO356_21255 0.80 +1.1 4,771,252 + AO356_21255 0.86 -0.6 4,771,253 - AO356_21255 0.86 +1.1 4,771,253 - AO356_21255 0.86 +0.2 4,771,253 - AO356_21255 0.86 +0.1
Or see this region's nucleotide sequence