Experiment: L-Arginine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_08095 and AO356_08100 overlap by 4 nucleotides AO356_08100 and AO356_08105 are separated by 268 nucleotides AO356_08105 and AO356_08110 are separated by 2 nucleotides
AO356_08095: AO356_08095 - transposase, at 1,813,411 to 1,814,247
_08095
AO356_08100: AO356_08100 - transposase, at 1,814,244 to 1,814,546
_08100
AO356_08105: AO356_08105 - 3-ketoacyl-ACP reductase, at 1,814,815 to 1,816,167
_08105
AO356_08110: AO356_08110 - acyl dehydratase, at 1,816,170 to 1,817,024
_08110
Position (kb)
1814
1815
1816
1817 Strain fitness (log2 ratio)
-2
-1
0
1 at 1814.607 kb on + strand at 1814.654 kb on + strand at 1814.655 kb on - strand at 1814.736 kb on + strand at 1814.736 kb on + strand at 1814.737 kb on - strand at 1814.737 kb on - strand at 1814.737 kb on - strand at 1814.743 kb on + strand at 1814.743 kb on + strand at 1814.743 kb on + strand at 1814.827 kb on + strand at 1814.827 kb on + strand at 1814.827 kb on + strand at 1814.829 kb on + strand at 1814.830 kb on - strand at 1814.830 kb on - strand at 1814.830 kb on - strand at 1815.019 kb on + strand, within AO356_08105 at 1815.020 kb on - strand, within AO356_08105 at 1815.020 kb on - strand, within AO356_08105 at 1815.020 kb on - strand, within AO356_08105 at 1815.310 kb on + strand, within AO356_08105 at 1815.310 kb on + strand, within AO356_08105 at 1815.310 kb on + strand, within AO356_08105 at 1815.310 kb on + strand, within AO356_08105 at 1815.311 kb on - strand, within AO356_08105 at 1815.311 kb on - strand, within AO356_08105 at 1815.311 kb on - strand, within AO356_08105 at 1815.311 kb on - strand, within AO356_08105 at 1815.311 kb on - strand, within AO356_08105 at 1815.311 kb on - strand, within AO356_08105 at 1815.615 kb on + strand, within AO356_08105 at 1815.615 kb on + strand, within AO356_08105 at 1815.880 kb on + strand, within AO356_08105 at 1815.880 kb on + strand, within AO356_08105 at 1815.880 kb on + strand, within AO356_08105 at 1815.881 kb on - strand, within AO356_08105 at 1815.881 kb on - strand, within AO356_08105 at 1815.881 kb on - strand, within AO356_08105 at 1815.881 kb on - strand, within AO356_08105 at 1815.881 kb on - strand, within AO356_08105 at 1815.881 kb on - strand, within AO356_08105 at 1816.140 kb on - strand at 1816.221 kb on + strand at 1816.221 kb on + strand at 1816.368 kb on + strand, within AO356_08110 at 1816.728 kb on + strand, within AO356_08110 at 1816.728 kb on + strand, within AO356_08110 at 1816.728 kb on + strand, within AO356_08110 at 1816.749 kb on + strand, within AO356_08110 at 1816.994 kb on + strand at 1816.994 kb on + strand at 1816.994 kb on + strand at 1816.994 kb on + strand at 1816.994 kb on + strand at 1816.994 kb on + strand at 1816.994 kb on + strand at 1816.995 kb on - strand at 1816.995 kb on - strand at 1816.995 kb on - strand at 1816.995 kb on - strand at 1816.995 kb on - strand at 1816.995 kb on - strand at 1816.995 kb on - strand at 1816.995 kb on - strand at 1817.163 kb on + strand at 1817.163 kb on + strand at 1817.163 kb on + strand at 1817.163 kb on + strand at 1817.163 kb on + strand at 1817.163 kb on + strand at 1817.164 kb on - strand at 1817.164 kb on - strand at 1817.164 kb on - strand at 1817.164 kb on - strand at 1817.164 kb on - strand at 1817.164 kb on - strand at 1817.164 kb on - strand at 1817.164 kb on - strand at 1817.167 kb on + strand at 1817.167 kb on + strand at 1817.167 kb on + strand at 1817.167 kb on + strand at 1817.167 kb on + strand at 1817.167 kb on + strand at 1817.167 kb on + strand at 1817.167 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (C) remove 1,814,607 + -0.6 1,814,654 + +0.3 1,814,655 - -0.7 1,814,736 + -0.4 1,814,736 + +0.3 1,814,737 - +0.4 1,814,737 - -0.3 1,814,737 - +1.0 1,814,743 + +0.5 1,814,743 + -0.6 1,814,743 + +0.7 1,814,827 + -0.6 1,814,827 + +0.3 1,814,827 + +0.5 1,814,829 + -0.1 1,814,830 - -0.2 1,814,830 - -0.5 1,814,830 - +1.2 1,815,019 + AO356_08105 0.15 -0.0 1,815,020 - AO356_08105 0.15 +0.2 1,815,020 - AO356_08105 0.15 +0.2 1,815,020 - AO356_08105 0.15 +0.8 1,815,310 + AO356_08105 0.37 +0.1 1,815,310 + AO356_08105 0.37 +0.4 1,815,310 + AO356_08105 0.37 +0.3 1,815,310 + AO356_08105 0.37 +0.3 1,815,311 - AO356_08105 0.37 -0.1 1,815,311 - AO356_08105 0.37 -0.4 1,815,311 - AO356_08105 0.37 -0.1 1,815,311 - AO356_08105 0.37 -0.5 1,815,311 - AO356_08105 0.37 -0.5 1,815,311 - AO356_08105 0.37 -0.3 1,815,615 + AO356_08105 0.59 +0.2 1,815,615 + AO356_08105 0.59 +0.0 1,815,880 + AO356_08105 0.79 +0.3 1,815,880 + AO356_08105 0.79 +0.2 1,815,880 + AO356_08105 0.79 -0.4 1,815,881 - AO356_08105 0.79 -0.2 1,815,881 - AO356_08105 0.79 -0.6 1,815,881 - AO356_08105 0.79 +0.5 1,815,881 - AO356_08105 0.79 +0.6 1,815,881 - AO356_08105 0.79 +0.7 1,815,881 - AO356_08105 0.79 +0.0 1,816,140 - -0.6 1,816,221 + +0.2 1,816,221 + -0.9 1,816,368 + AO356_08110 0.23 -0.2 1,816,728 + AO356_08110 0.65 -0.3 1,816,728 + AO356_08110 0.65 -0.2 1,816,728 + AO356_08110 0.65 -1.8 1,816,749 + AO356_08110 0.68 -2.2 1,816,994 + -0.1 1,816,994 + +1.5 1,816,994 + -0.1 1,816,994 + -0.1 1,816,994 + +0.1 1,816,994 + +0.5 1,816,994 + +0.7 1,816,995 - -1.6 1,816,995 - +1.3 1,816,995 - +0.6 1,816,995 - +0.2 1,816,995 - +0.4 1,816,995 - -1.0 1,816,995 - +0.3 1,816,995 - -0.7 1,817,163 + -1.0 1,817,163 + +0.2 1,817,163 + -0.6 1,817,163 + +1.0 1,817,163 + +0.5 1,817,163 + +0.4 1,817,164 - -0.3 1,817,164 - -0.7 1,817,164 - +0.5 1,817,164 - +0.6 1,817,164 - +0.3 1,817,164 - -0.4 1,817,164 - +0.5 1,817,164 - +0.6 1,817,167 + +1.1 1,817,167 + +0.2 1,817,167 + +0.6 1,817,167 + -2.3 1,817,167 + -0.1 1,817,167 + +0.7 1,817,167 + -0.5 1,817,167 + -2.1
Or see this region's nucleotide sequence