Strain Fitness in Pantoea sp. MT58 around IAI47_18810

Experiment: Defined media control, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Defined media control, aerobic
4,008,798	+		IAI47_18800	0.88	+0.4
4,008,798	+		IAI47_18800	0.88	+1.6
4,008,799	-		IAI47_18800	0.88	-0.9
4,008,799	-		IAI47_18800	0.88	-0.2
4,008,799	-		IAI47_18800	0.88	-0.2
4,008,800	+		IAI47_18800	0.89	+0.3
4,008,800	+		IAI47_18800	0.89	+0.5
4,008,800	+		IAI47_18800	0.89	+0.9
4,008,800	+		IAI47_18800	0.89	+0.1
4,008,800	+		IAI47_18800	0.89	+0.4
4,008,800	+		IAI47_18800	0.89	-1.9
4,008,800	+		IAI47_18800	0.89	-1.2
4,008,800	+		IAI47_18800	0.89	+0.9
4,008,801	-		IAI47_18800	0.89	+0.3
4,008,801	-		IAI47_18800	0.89	+0.3
4,008,801	-		IAI47_18800	0.89	-1.4
4,008,906	+				-2.8
4,008,907	-				-0.4
4,008,921	+				-2.0
4,008,921	+				+1.8
4,008,921	+				+1.1
4,008,922	-				-1.7
4,008,922	-				+0.1
4,008,922	-				-2.6
4,008,922	-				+0.4
4,008,922	-				+3.3
4,008,970	+				+1.3
4,008,971	-				-0.7
4,009,029	+		IAI47_18805	0.17	-0.3
4,009,029	+		IAI47_18805	0.17	-2.6
4,009,029	+		IAI47_18805	0.17	-3.6
4,009,029	+		IAI47_18805	0.17	-1.7
4,009,030	-		IAI47_18805	0.17	+1.0
4,009,030	-		IAI47_18805	0.17	-2.3
4,009,030	-		IAI47_18805	0.17	-1.7
4,009,032	+		IAI47_18805	0.17	+0.9
4,009,032	+		IAI47_18805	0.17	-1.6
4,009,032	+		IAI47_18805	0.17	+0.1
4,009,032	+		IAI47_18805	0.17	+0.6
4,009,032	+		IAI47_18805	0.17	-0.6
4,009,032	+		IAI47_18805	0.17	+0.1
4,009,033	-		IAI47_18805	0.17	+0.5
4,009,033	-		IAI47_18805	0.17	+2.3
4,009,033	-		IAI47_18805	0.17	+2.5
4,009,033	-		IAI47_18805	0.17	-1.6
4,009,033	-		IAI47_18805	0.17	-0.0
4,009,036	-		IAI47_18805	0.18	-0.3
4,009,036	-		IAI47_18805	0.18	+0.7
4,009,036	-		IAI47_18805	0.18	+0.9
4,009,036	-		IAI47_18805	0.18	-2.5
4,009,036	-				+3.3
4,009,096	+		IAI47_18805	0.27	-2.4
4,009,096	+		IAI47_18805	0.27	-0.1
4,009,096	+		IAI47_18805	0.27	-1.0
4,009,096	+		IAI47_18805	0.27	+0.4
4,009,096	+		IAI47_18805	0.27	-1.2
4,009,097	-		IAI47_18805	0.27	+0.7
4,009,097	-		IAI47_18805	0.27	-0.6
4,009,097	-		IAI47_18805	0.27	+1.2
4,009,137	+		IAI47_18805	0.33	+1.1
4,009,137	+		IAI47_18805	0.33	-1.9
4,009,137	+		IAI47_18805	0.33	+1.9
4,009,176	+		IAI47_18805	0.39	-3.6
4,009,185	+		IAI47_18805	0.40	-0.7
4,009,186	-		IAI47_18805	0.40	-1.2
4,009,186	-		IAI47_18805	0.40	+1.1
4,009,221	-		IAI47_18805	0.46	-3.5
4,009,247	+		IAI47_18805	0.50	-0.2
4,009,265	+		IAI47_18805	0.52	+0.2
4,009,265	+		IAI47_18805	0.52	-1.6
4,009,265	+		IAI47_18805	0.52	+1.7
4,009,265	+		IAI47_18805	0.52	+0.6
4,009,265	+		IAI47_18805	0.52	-1.5
4,009,265	+		IAI47_18805	0.52	-0.1
4,009,265	+		IAI47_18805	0.52	-0.9
4,009,266	-		IAI47_18805	0.52	-1.9
4,009,266	-		IAI47_18805	0.52	+0.4
4,009,266	-		IAI47_18805	0.52	-1.6
4,009,266	-		IAI47_18805	0.52	-0.7
4,009,266	-		IAI47_18805	0.52	+1.3
4,009,283	+		IAI47_18805	0.55	-3.4
4,009,283	+		IAI47_18805	0.55	+1.5
4,009,283	+		IAI47_18805	0.55	-0.0
4,009,283	+		IAI47_18805	0.55	-0.1
4,009,284	-		IAI47_18805	0.55	-1.3
4,009,284	-		IAI47_18805	0.55	+0.8
4,009,359	+		IAI47_18805	0.67	+0.2
4,009,360	-		IAI47_18805	0.67	-0.8
4,009,378	-		IAI47_18805	0.69	+1.1
4,009,391	+		IAI47_18805	0.71	+0.8
4,009,428	+		IAI47_18805	0.77	-0.8
4,009,444	+		IAI47_18805	0.79	-0.8
4,009,444	+		IAI47_18805	0.79	+1.4
4,009,445	-		IAI47_18805	0.80	+0.5
4,009,445	-		IAI47_18805	0.80	+0.5
4,009,446	+		IAI47_18805	0.80	+1.0
4,009,446	+		IAI47_18805	0.80	-0.3
4,009,446	+		IAI47_18805	0.80	+0.1
4,009,447	-		IAI47_18805	0.80	+0.9
4,009,501	+		IAI47_18805	0.88	+0.1
4,009,506	+		IAI47_18805	0.89	+0.3
4,009,507	-		IAI47_18805	0.89	+0.5
4,009,507	-		IAI47_18805	0.89	+0.6
4,009,507	-		IAI47_18805	0.89	-1.3
4,009,507	-		IAI47_18805	0.89	-2.3
4,009,507	-				+2.3
4,009,507	-		IAI47_18805	0.89	+0.7
4,009,507	-		IAI47_18805	0.89	-0.1
4,009,571	+				+2.0
4,009,571	+				-0.6
4,009,572	-				-0.0
4,009,572	-				-0.2
4,009,572	-				+1.5
4,009,572	-				+0.3
4,009,587	+				-0.3
4,009,588	-				-2.4
4,009,606	+				+1.4
4,009,607	-				+1.5
4,009,607	-				+0.8
4,009,607	-				-2.2
4,009,618	+				-1.1
4,009,619	-				+1.0
4,009,671	+				+1.4
4,009,671	+				+0.7
4,009,671	+				-1.8
4,009,671	+				-0.5
4,009,671	+				+1.2
4,009,672	-				-0.1
4,009,672	-				+0.5
4,009,672	-				+0.6
4,009,682	+				-0.6
4,009,683	-				-1.3
4,009,697	-				+0.3
4,009,697	-				-0.1
4,009,836	+				+1.0
4,009,836	+				+0.3
4,009,836	+				+2.5
4,009,836	+				-0.5
4,009,836	+				+0.6
4,009,836	+				-0.5
4,009,836	+				+0.2
4,009,836	+				+1.0
4,009,837	-				-0.5
4,009,837	-				-0.3
4,009,837	-				-1.9
4,009,837	-				-0.2
4,009,837	-				-0.3
4,009,837	-				-0.8
4,009,837	-				+0.6
4,009,837	-				-0.5
4,009,838	+				+0.7
4,009,838	+				+1.2
4,009,838	+				+1.1
4,009,839	-				-2.3
4,009,839	-				-0.4
4,009,952	+		IAI47_18810	0.17	+0.6
4,009,952	+		IAI47_18810	0.17	-0.4
4,009,952	+		IAI47_18810	0.17	-0.1
4,009,952	+		IAI47_18810	0.17	-2.3
4,010,028	+		IAI47_18810	0.23	+4.9
4,010,029	-		IAI47_18810	0.23	-0.0
4,010,045	+		IAI47_18810	0.24	+3.0
4,010,124	-		IAI47_18810	0.30	-2.2
4,010,171	+		IAI47_18810	0.33	-0.3
4,010,205	-		IAI47_18810	0.36	-0.2
4,010,209	+		IAI47_18810	0.36	+0.4
4,010,210	-		IAI47_18810	0.36	+1.5
4,010,210	-		IAI47_18810	0.36	+2.1
4,010,285	+		IAI47_18810	0.42	-1.1
4,010,285	+		IAI47_18810	0.42	-1.0
4,010,285	+		IAI47_18810	0.42	-0.2
4,010,285	+		IAI47_18810	0.42	-1.5
4,010,286	-		IAI47_18810	0.42	+1.8
4,010,286	-		IAI47_18810	0.42	+2.6
4,010,286	-		IAI47_18810	0.42	-2.7
4,010,286	-		IAI47_18810	0.42	+1.3
4,010,286	-		IAI47_18810	0.42	+1.2
4,010,286	-		IAI47_18810	0.42	+1.0
4,010,286	-		IAI47_18810	0.42	+1.6
4,010,289	-		IAI47_18810	0.42	+0.9
4,010,334	+		IAI47_18810	0.46	+1.0
4,010,422	+		IAI47_18810	0.53	-0.6
4,010,422	+		IAI47_18810	0.53	-0.2
4,010,423	-		IAI47_18810	0.53	-0.7
4,010,438	+		IAI47_18810	0.54	-2.0
4,010,438	+		IAI47_18810	0.54	-2.4
4,010,439	-		IAI47_18810	0.54	-1.6
4,010,441	+		IAI47_18810	0.54	+0.7
4,010,442	-		IAI47_18810	0.54	+0.5
4,010,442	-		IAI47_18810	0.54	-2.3
4,010,442	-		IAI47_18810	0.54	+0.3
4,010,442	-		IAI47_18810	0.54	+1.5
4,010,442	-		IAI47_18810	0.54	+0.2
4,010,486	+		IAI47_18810	0.57	-2.9
4,010,486	+		IAI47_18810	0.57	+0.7
4,010,486	+		IAI47_18810	0.57	-0.4
4,010,487	-		IAI47_18810	0.58	-0.8
4,010,487	-		IAI47_18810	0.58	+1.8
4,010,487	-		IAI47_18810	0.58	-2.4
4,010,487	-		IAI47_18810	0.58	+1.7
4,010,487	-		IAI47_18810	0.58	-1.2
4,010,487	-		IAI47_18810	0.58	-0.2
4,010,487	-		IAI47_18810	0.58	-0.5
4,010,538	-		IAI47_18810	0.61	-2.3
4,010,592	+		IAI47_18810	0.66	+2.1
4,010,592	+		IAI47_18810	0.66	+1.7
4,010,592	+		IAI47_18810	0.66	-1.1
4,010,592	+		IAI47_18810	0.66	-2.0
4,010,592	+		IAI47_18810	0.66	+0.4
4,010,593	-		IAI47_18810	0.66	-2.1
4,010,593	-		IAI47_18810	0.66	-2.5
4,010,593	-		IAI47_18810	0.66	+1.5
4,010,606	+		IAI47_18810	0.67	+1.0
4,010,606	+		IAI47_18810	0.67	-2.9
4,010,606	+		IAI47_18810	0.67	-2.6
4,010,606	+		IAI47_18810	0.67	+0.5
4,010,606	+		IAI47_18810	0.67	-1.8
4,010,606	+		IAI47_18810	0.67	+0.7
4,010,606	+		IAI47_18810	0.67	-0.9
4,010,606	+		IAI47_18810	0.67	-1.2
4,010,606	+		IAI47_18810	0.67	-2.6
4,010,606	+		IAI47_18810	0.67	-2.2
4,010,606	+		IAI47_18810	0.67	+1.5
4,010,607	-		IAI47_18810	0.67	-0.7
4,010,607	-		IAI47_18810	0.67	+1.0
4,010,607	-		IAI47_18810	0.67	-2.6
4,010,607	-		IAI47_18810	0.67	-1.7
4,010,607	-		IAI47_18810	0.67	+0.9
4,010,607	-		IAI47_18810	0.67	-2.4
4,010,607	-		IAI47_18810	0.67	+0.7
4,010,607	-		IAI47_18810	0.67	+3.5
4,010,607	-		IAI47_18810	0.67	+1.0
4,010,607	-		IAI47_18810	0.67	-1.2
4,010,607	-		IAI47_18810	0.67	-0.4
4,010,607	-		IAI47_18810	0.67	+1.7
4,010,607	-		IAI47_18810	0.67	+0.1
4,010,607	-		IAI47_18810	0.67	-0.1
4,010,652	+		IAI47_18810	0.70	-1.3
4,010,652	+		IAI47_18810	0.70	-0.6
4,010,652	+		IAI47_18810	0.70	-0.8
4,010,652	+		IAI47_18810	0.70	-1.2
4,010,652	+		IAI47_18810	0.70	+1.2
4,010,653	-		IAI47_18810	0.70	+1.6
4,010,653	-		IAI47_18810	0.70	+0.5
4,010,653	-		IAI47_18810	0.70	-1.8
4,010,653	-		IAI47_18810	0.70	+0.7
4,010,708	-		IAI47_18810	0.74	-1.2
4,010,772	+		IAI47_18810	0.79	-2.0
4,010,772	+		IAI47_18810	0.79	-0.4
4,010,773	-		IAI47_18810	0.79	-1.7
4,010,773	-		IAI47_18810	0.79	+0.7
4,010,773	-		IAI47_18810	0.79	+1.2
4,010,773	-		IAI47_18810	0.79	-1.6
4,010,773	-		IAI47_18810	0.79	-0.1
4,010,796	+		IAI47_18810	0.81	-0.6
4,010,796	+		IAI47_18810	0.81	-0.2
4,010,796	+		IAI47_18810	0.81	-0.6
4,010,796	+		IAI47_18810	0.81	-0.7
4,010,796	+		IAI47_18810	0.81	-0.4
4,010,796	+		IAI47_18810	0.81	+0.2
4,010,796	+		IAI47_18810	0.81	-2.4
4,010,796	+		IAI47_18810	0.81	-0.5
4,010,796	+		IAI47_18810	0.81	+1.7
4,010,797	-		IAI47_18810	0.81	+0.7
4,010,797	-		IAI47_18810	0.81	+1.4
4,010,800	+		IAI47_18810	0.81	+0.1
4,010,800	+		IAI47_18810	0.81	-1.3
4,010,800	+		IAI47_18810	0.81	-0.8
4,010,800	+		IAI47_18810	0.81	-0.4
4,010,801	-		IAI47_18810	0.81	-2.5
4,010,801	-		IAI47_18810	0.81	-1.4
4,010,809	+		IAI47_18810	0.82	-0.3
4,010,810	-		IAI47_18810	0.82	-1.4
4,010,931	-				+1.1
4,010,938	-				-0.4
4,010,938	-				-0.6
4,010,938	-				+0.9
4,010,938	-				+0.6
4,010,944	+				-0.5
4,010,945	-				+1.1
4,010,945	-				+0.3
4,010,989	+				+1.1
4,010,989	+				-2.4
4,010,990	-				-1.6
4,011,042	+				-1.4
4,011,042	+				+1.2
4,011,043	-				-1.0
4,011,043	-				+1.1
4,011,043	-				+0.3
4,011,083	+				+1.4
4,011,084	-				+0.6
4,011,156	+				-1.5
4,011,156	+				+0.0
4,011,156	+				+0.2
4,011,157	-		IAI47_18815	0.10	+0.9
4,011,175	+		IAI47_18815	0.12	-0.8
4,011,289	-		IAI47_18815	0.28	-1.2
4,011,297	-		IAI47_18815	0.29	-0.8
4,011,297	-		IAI47_18815	0.29	-0.6
4,011,438	+		IAI47_18815	0.47	+0.1
4,011,438	+		IAI47_18815	0.47	-1.2
4,011,439	-		IAI47_18815	0.48	+2.1
4,011,439	-		IAI47_18815	0.48	+0.1
4,011,567	+		IAI47_18815	0.65	-3.4
4,011,568	-		IAI47_18815	0.65	-0.9
4,011,568	-		IAI47_18815	0.65	-3.2
4,011,568	-		IAI47_18815	0.65	-1.4
4,011,568	-		IAI47_18815	0.65	-2.9
4,011,568	-		IAI47_18815	0.65	-0.4
4,011,579	-		IAI47_18815	0.66	-0.5
4,011,586	-		IAI47_18815	0.67	-0.9
4,011,668	+		IAI47_18815	0.78	-2.2
4,011,669	-		IAI47_18815	0.78	-0.9
4,011,681	+		IAI47_18815	0.80	-0.8
4,011,681	+		IAI47_18815	0.80	+0.3
4,011,681	+		IAI47_18815	0.80	-0.2
4,011,681	+		IAI47_18815	0.80	-3.2
4,011,681	+		IAI47_18815	0.80	+0.4
4,011,681	+		IAI47_18815	0.80	-2.0
4,011,681	+		IAI47_18815	0.80	-1.8
4,011,681	+		IAI47_18815	0.80	-1.8
4,011,681	+		IAI47_18815	0.80	-1.6
4,011,681	+		IAI47_18815	0.80	-2.2
4,011,681	+		IAI47_18815	0.80	+0.3
4,011,681	+		IAI47_18815	0.80	-1.6
4,011,681	+		IAI47_18815	0.80	-1.2
4,011,681	+		IAI47_18815	0.80	+0.7
4,011,682	-		IAI47_18815	0.80	-3.2
4,011,682	-		IAI47_18815	0.80	-1.2
4,011,682	-		IAI47_18815	0.80	-0.3
4,011,682	-		IAI47_18815	0.80	-0.8
4,011,682	-		IAI47_18815	0.80	-0.5
4,011,682	-		IAI47_18815	0.80	-3.1
4,011,682	-		IAI47_18815	0.80	+1.3
4,011,682	-		IAI47_18815	0.80	-1.8
4,011,682	-		IAI47_18815	0.80	-3.3
4,011,682	-		IAI47_18815	0.80	-0.8
4,011,682	-		IAI47_18815	0.80	-2.3
4,011,682	-		IAI47_18815	0.80	-1.9
4,011,682	-		IAI47_18815	0.80	-1.7
4,011,682	-		IAI47_18815	0.80	+2.0
4,011,771	+				-2.2
4,011,772	-				+0.2
4,011,772	-				+0.3
4,011,772	-				-0.8
4,011,772	-				-0.8
4,011,772	-				-1.8
4,011,772	-				-1.3
4,011,777	+				-1.2
4,011,777	+				-2.3
4,011,777	+				-1.6
4,011,777	+				-2.3
4,011,777	+				-0.9
4,011,777	+				-2.0
4,011,777	+				-1.3
4,011,777	+				-2.5
4,011,777	+				+0.6
4,011,777	+				-1.9
4,011,777	+				+1.4
4,011,778	-				+0.3
4,011,778	-				-1.8
4,011,778	-				-2.6
4,011,778	-				-0.8
4,011,778	-				-3.3
4,011,814	+				-2.5
4,011,815	-				+0.3
4,011,857	+				-2.7
4,011,857	+				-0.9
4,011,857	+				-3.2
4,011,858	-				-0.7
4,011,858	-				-0.4
4,011,858	-				-2.7
4,011,858	-				-0.9
4,011,875	+				-0.9
4,011,875	+				-2.6
4,011,876	-				-2.7
4,011,887	+				+1.8
4,011,887	+				-2.8
4,011,887	+				+1.7
4,011,887	+				+0.1
4,011,916	+				+0.3
4,011,916	+				-3.6
4,011,916	+				+0.6
4,011,917	-				+0.6
4,011,917	-				+0.4
4,011,932	+				-0.4
4,011,932	+				+0.3
4,011,932	+				+0.2
4,011,933	-				+2.1
4,011,933	-				+0.6