Strain Fitness in Pantoea sp. MT58 around IAI47_10270

Experiment: Defined media control, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Defined media control, aerobic
2,168,614	+		IAI47_10260	0.58	-1.4
2,168,614	+		IAI47_10260	0.58	+1.3
2,168,615	-		IAI47_10260	0.58	+0.3
2,168,615	-		IAI47_10260	0.58	-0.7
2,168,615	-		IAI47_10260	0.58	+0.7
2,168,615	-		IAI47_10260	0.58	+1.2
2,168,618	+		IAI47_10260	0.58	+1.7
2,168,618	+		IAI47_10260	0.58	+1.3
2,168,618	+		IAI47_10260	0.58	+2.6
2,168,618	+		IAI47_10260	0.58	-2.1
2,168,618	+		IAI47_10260	0.58	-2.5
2,168,618	+		IAI47_10260	0.58	-2.1
2,168,618	+		IAI47_10260	0.58	-1.7
2,168,618	+		IAI47_10260	0.58	+0.6
2,168,618	+		IAI47_10260	0.58	-2.0
2,168,619	-		IAI47_10260	0.59	+3.7
2,168,619	-		IAI47_10260	0.59	+2.8
2,168,619	-		IAI47_10260	0.59	+0.4
2,168,619	-		IAI47_10260	0.59	-0.2
2,168,619	-		IAI47_10260	0.59	+0.5
2,168,619	-		IAI47_10260	0.59	+0.3
2,168,619	-		IAI47_10260	0.59	+1.5
2,168,619	-		IAI47_10260	0.59	-0.2
2,168,619	-		IAI47_10260	0.59	+0.1
2,168,619	-		IAI47_10260	0.59	+0.2
2,168,678	+		IAI47_10260	0.73	+0.4
2,168,795	+				-1.3
2,168,795	+				-2.4
2,168,795	+				+0.5
2,168,821	+				-1.7
2,168,829	+				-0.4
2,168,830	-				-1.6
2,168,837	+				+1.1
2,168,869	+				-2.6
2,168,869	+				-0.1
2,168,870	-				-0.2
2,168,889	+				+0.6
2,168,890	-				+1.2
2,169,038	+		IAI47_10265	0.32	+1.4
2,169,039	-		IAI47_10265	0.32	-0.5
2,169,136	-		IAI47_10265	0.49	-2.4
2,169,136	-		IAI47_10265	0.49	+2.1
2,169,169	+		IAI47_10265	0.55	-4.4
2,169,169	+		IAI47_10265	0.55	+1.4
2,169,170	-		IAI47_10265	0.55	-0.2
2,169,170	-		IAI47_10265	0.55	-1.6
2,169,203	+		IAI47_10265	0.61	-2.4
2,169,204	-		IAI47_10265	0.61	-2.7
2,169,220	+		IAI47_10265	0.64	+0.4
2,169,221	-		IAI47_10265	0.65	-2.4
2,169,221	-		IAI47_10265	0.65	-3.5
2,169,241	+		IAI47_10265	0.68	+2.6
2,169,242	-		IAI47_10265	0.68	+0.5
2,169,319	+		IAI47_10265	0.82	+2.4
2,169,319	+		IAI47_10265	0.82	+0.9
2,169,320	-		IAI47_10265	0.82	+1.2
2,169,320	-		IAI47_10265	0.82	-1.1
2,169,447	+				+3.1
2,169,447	+				+0.4
2,169,448	-				+0.1
2,169,448	-				+1.6
2,169,448	-				-2.2
2,169,448	-				-0.3
2,169,460	+				+2.2
2,169,463	+				+0.3
2,169,463	+				-0.4
2,169,463	+				-2.7
2,169,463	+				+1.9
2,169,463	+				-2.3
2,169,463	+				+0.6
2,169,463	+				+1.4
2,169,464	-				+0.4
2,169,464	-				-1.4
2,169,464	-				+2.5
2,169,464	-				+0.3
2,169,464	-				+1.6
2,169,464	-				-2.1
2,169,464	-				-2.0
2,169,464	-				+0.1
2,169,468	+				+1.6
2,169,468	+				-1.2
2,169,484	+				+0.1
2,169,566	+				-1.1
2,169,613	-				-1.1
2,169,613	-				-1.8
2,169,636	+				-0.6
2,169,636	+				+1.6
2,169,636	+				+1.5
2,169,636	+				-2.0
2,169,637	-				-2.2
2,169,637	-				-2.3
2,169,637	-				+0.1
2,169,743	+		IAI47_10270	0.17	-2.4
2,169,941	+		IAI47_10270	0.34	-0.8
2,169,979	+		IAI47_10270	0.37	+0.9
2,169,980	-		IAI47_10270	0.38	+0.7
2,170,050	+		IAI47_10270	0.43	+0.6
2,170,050	+		IAI47_10270	0.43	-3.2
2,170,130	+		IAI47_10270	0.50	-1.6
2,170,130	+		IAI47_10270	0.50	-2.4
2,170,130	+		IAI47_10270	0.50	-1.2
2,170,131	-		IAI47_10270	0.50	-2.1
2,170,166	+		IAI47_10270	0.53	+0.5
2,170,167	-		IAI47_10270	0.53	-0.6
2,170,167	-		IAI47_10270	0.53	+3.4
2,170,167	-		IAI47_10270	0.53	-2.8
2,170,201	-		IAI47_10270	0.56	+0.9
2,170,249	+		IAI47_10270	0.60	-1.9
2,170,249	+		IAI47_10270	0.60	-2.0
2,170,250	-		IAI47_10270	0.61	-0.6
2,170,359	-		IAI47_10270	0.70	+0.4
2,170,435	+		IAI47_10270	0.76	-0.1
2,170,440	+		IAI47_10270	0.77	+0.8
2,170,441	-		IAI47_10270	0.77	+0.1
2,170,441	-		IAI47_10270	0.77	-0.9
2,170,598	-				+1.1
2,170,640	+				+0.1
2,170,673	+				-2.0
2,170,673	+				-0.9
2,170,721	+				+2.8
2,170,734	-				+2.6
2,170,776	+				-3.5
2,170,777	-				+0.2
2,170,826	+				+0.1
2,170,826	+				+0.4
2,170,826	+				+1.5
2,170,826	+				+1.4
2,170,827	-				+0.8
2,170,827	-				-0.2
2,170,827	-				+0.3
2,170,827	-				-3.5
2,170,836	+				-0.1
2,170,870	+				+1.4
2,170,933	+				+1.5
2,170,933	+				+1.2
2,170,933	+				+1.0
2,170,956	+				-0.6
2,170,956	+				+0.7
2,170,957	-				-1.9
2,171,027	+		IAI47_10275	0.10	-0.2
2,171,027	+		IAI47_10275	0.10	+0.1
2,171,028	-		IAI47_10275	0.10	-2.1
2,171,067	+		IAI47_10275	0.13	-0.8
2,171,068	-		IAI47_10275	0.13	+3.1
2,171,076	-		IAI47_10275	0.14	+0.7
2,171,076	-		IAI47_10275	0.14	+0.8
2,171,076	-		IAI47_10275	0.14	+3.1
2,171,178	-		IAI47_10275	0.21	+0.7
2,171,178	-		IAI47_10275	0.21	+2.0
2,171,178	-		IAI47_10275	0.21	-1.7
2,171,262	+		IAI47_10275	0.27	+0.3
2,171,262	+		IAI47_10275	0.27	+1.8
2,171,262	+		IAI47_10275	0.27	+0.2
2,171,262	+		IAI47_10275	0.27	-0.7
2,171,262	+		IAI47_10275	0.27	-0.8
2,171,262	+		IAI47_10275	0.27	+0.2
2,171,262	+		IAI47_10275	0.27	-2.4
2,171,263	-		IAI47_10275	0.27	+1.7
2,171,263	-		IAI47_10275	0.27	-2.1
2,171,263	-		IAI47_10275	0.27	-0.3
2,171,263	-		IAI47_10275	0.27	-1.8
2,171,263	-		IAI47_10275	0.27	-0.9
2,171,263	-		IAI47_10275	0.27	+0.4
2,171,268	+		IAI47_10275	0.28	-1.5
2,171,268	+		IAI47_10275	0.28	-1.7
2,171,268	+		IAI47_10275	0.28	+1.0
2,171,269	-		IAI47_10275	0.28	+1.1
2,171,269	-		IAI47_10275	0.28	+0.4
2,171,269	-		IAI47_10275	0.28	+1.0
2,171,282	+		IAI47_10275	0.29	-0.4
2,171,385	-		IAI47_10275	0.36	-0.8
2,171,385	-		IAI47_10275	0.36	+0.2
2,171,530	+		IAI47_10275	0.47	+0.2
2,171,531	-		IAI47_10275	0.47	+1.5
2,171,559	+		IAI47_10275	0.49	+0.0
2,171,559	+		IAI47_10275	0.49	-0.6
2,171,566	+		IAI47_10275	0.49	+0.7
2,171,615	+		IAI47_10275	0.53	-2.7
2,171,615	+		IAI47_10275	0.53	-1.0
2,171,616	-		IAI47_10275	0.53	+1.4
2,171,633	+		IAI47_10275	0.54	-2.6
2,171,634	-		IAI47_10275	0.54	-1.0
2,171,634	-		IAI47_10275	0.54	-0.3
2,171,634	-		IAI47_10275	0.54	-2.1
2,171,672	+		IAI47_10275	0.57	+1.3
2,171,689	+		IAI47_10275	0.58	-1.6
2,171,689	+		IAI47_10275	0.58	+1.1
2,171,690	-		IAI47_10275	0.58	-1.9
2,171,690	-		IAI47_10275	0.58	+1.5
2,171,694	-		IAI47_10275	0.58	-0.6