Strain Fitness in Pantoea sp. MT58 around IAI47_06635

Experiment: Defined media control, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Defined media control, aerobic
1,381,459	+				-1.5
1,381,460	-				-0.4
1,381,464	+				+0.4
1,381,465	-				+2.1
1,381,484	+				-1.3
1,381,484	+				+0.9
1,381,485	-				+1.2
1,381,527	+				-2.8
1,381,528	-				-0.8
1,381,528	-				-1.0
1,381,528	-				+0.7
1,381,551	+				+1.7
1,381,551	+				-1.6
1,381,551	+				+0.2
1,381,552	-				-0.7
1,381,552	-				-0.0
1,381,586	+				-2.1
1,381,598	+				-0.9
1,381,598	+				+0.2
1,381,625	-				-1.4
1,381,633	-				-2.2
1,381,656	-				+0.9
1,381,669	+				+0.6
1,381,677	+				+0.5
1,381,678	-				+1.0
1,381,700	-				+2.4
1,381,706	+				+0.2
1,381,707	-				-2.3
1,381,707	-				+0.7
1,381,719	+				-1.7
1,381,719	+				+0.8
1,381,720	-				+1.2
1,381,720	-				-0.5
1,381,721	+				-1.5
1,381,721	+				+0.0
1,381,721	+				-1.5
1,381,721	+				+0.5
1,381,721	+				+2.6
1,381,722	-				-2.8
1,381,722	-				-1.8
1,381,722	-				-1.7
1,381,722	-				+0.3
1,381,725	+				+1.1
1,381,733	-				-0.8
1,381,752	+				+0.1
1,381,752	+				+1.6
1,381,759	+				-0.6
1,381,760	-				+0.8
1,381,760	-				+2.0
1,381,777	+		IAI47_06630	0.10	-0.2
1,381,777	+		IAI47_06630	0.10	+0.4
1,381,778	-		IAI47_06630	0.10	-2.4
1,381,778	-		IAI47_06630	0.10	-1.7
1,381,778	-		IAI47_06630	0.10	+2.1
1,381,778	-		IAI47_06630	0.10	+1.4
1,381,830	+		IAI47_06630	0.18	+0.7
1,381,831	-		IAI47_06630	0.18	+0.2
1,381,836	+		IAI47_06630	0.19	+0.5
1,381,876	+		IAI47_06630	0.24	+3.5
1,381,876	+		IAI47_06630	0.24	+2.0
1,381,876	+		IAI47_06630	0.24	+0.4
1,381,877	-		IAI47_06630	0.24	-0.4
1,381,887	+		IAI47_06630	0.26	+0.6
1,381,887	+		IAI47_06630	0.26	+2.5
1,381,902	+		IAI47_06630	0.28	-1.3
1,381,903	-		IAI47_06630	0.28	-2.9
1,381,922	+		IAI47_06630	0.31	+1.7
1,381,923	-		IAI47_06630	0.31	+0.6
1,381,932	+		IAI47_06630	0.32	+0.4
1,381,932	+		IAI47_06630	0.32	-3.2
1,381,932	+		IAI47_06630	0.32	-1.3
1,381,933	-		IAI47_06630	0.32	-0.7
1,381,933	-		IAI47_06630	0.32	-1.6
1,381,959	+		IAI47_06630	0.36	-0.0
1,381,999	-		IAI47_06630	0.42	-2.7
1,382,014	+		IAI47_06630	0.44	+1.5
1,382,015	-		IAI47_06630	0.44	+0.4
1,382,077	+		IAI47_06630	0.53	-1.1
1,382,077	+		IAI47_06630	0.53	-0.2
1,382,077	+		IAI47_06630	0.53	-0.5
1,382,077	+		IAI47_06630	0.53	-3.3
1,382,077	+		IAI47_06630	0.53	+0.4
1,382,077	+		IAI47_06630	0.53	-0.1
1,382,078	-		IAI47_06630	0.53	+1.3
1,382,094	+		IAI47_06630	0.55	-2.0
1,382,094	+		IAI47_06630	0.55	+0.6
1,382,094	+		IAI47_06630	0.55	-1.9
1,382,095	-		IAI47_06630	0.55	+0.7
1,382,095	-		IAI47_06630	0.55	-1.4
1,382,124	+		IAI47_06630	0.59	+1.2
1,382,124	+		IAI47_06630	0.59	-1.0
1,382,125	-		IAI47_06630	0.59	+0.9
1,382,183	+		IAI47_06630	0.68	+2.7
1,382,183	+		IAI47_06630	0.68	+0.8
1,382,183	+		IAI47_06630	0.68	+0.1
1,382,184	-		IAI47_06630	0.68	+0.8
1,382,184	-		IAI47_06630	0.68	+1.0
1,382,184	-		IAI47_06630	0.68	+0.0
1,382,184	-		IAI47_06630	0.68	-2.5
1,382,239	-		IAI47_06630	0.75	+0.6
1,382,280	+		IAI47_06630	0.81	+0.9
1,382,280	+		IAI47_06630	0.81	-1.6
1,382,304	+		IAI47_06630	0.85	-1.3
1,382,343	-				+1.4
1,382,343	-				+0.7
1,382,343	-				-0.0
1,382,343	-				-0.2
1,382,362	+				+0.6
1,382,362	+				-1.4
1,382,362	+				+0.3
1,382,362	+				+1.3
1,382,362	+				+2.5
1,382,362	+				-1.7
1,382,362	+				-0.4
1,382,362	+				+2.7
1,382,362	+				-0.4
1,382,362	+				+1.7
1,382,363	-				-0.3
1,382,363	-				-0.6
1,382,363	-				-1.6
1,382,363	-				-0.4
1,382,363	-				-0.5
1,382,363	-				-0.4
1,382,363	-				+0.0
1,382,363	-				-0.4
1,382,363	-				-2.3
1,382,388	+				-1.0
1,382,388	+				+0.3
1,382,388	+				-1.4
1,382,389	-				+0.4
1,382,389	-				+0.1
1,382,389	-				+1.5
1,382,391	+				+0.3
1,382,391	+				+1.2
1,382,391	+				-2.8
1,382,391	+				+1.1
1,382,391	+				+0.4
1,382,391	+				+1.2
1,382,391	+				+1.7
1,382,391	+				-1.1
1,382,391	+				+2.6
1,382,391	+				-0.7
1,382,391	+				+2.3
1,382,391	+				-0.3
1,382,392	-				+2.1
1,382,392	-				+0.5
1,382,392	-				-2.0
1,382,392	-				+1.2
1,382,392	-				-0.0
1,382,394	+				+1.0
1,382,395	-				+1.7
1,382,395	-				+1.2
1,382,395	-				+0.8
1,382,395	-				-3.5
1,382,395	-				-0.7
1,382,395	-				-0.3
1,382,416	+				-1.7
1,382,417	-				+0.2
1,382,447	+				+1.0
1,382,447	+				+0.3
1,382,447	+				-0.0
1,382,447	+				-1.6
1,382,447	+				+1.8
1,382,447	+				-1.0
1,382,448	-				-0.4
1,382,448	-				-1.6
1,382,448	-				+1.1
1,382,448	-				-0.4
1,382,448	-				+1.4
1,382,456	+				+2.2
1,382,462	-				+2.9
1,382,462	-				+1.0
1,382,488	+				+0.0
1,382,530	-				+2.3
1,382,530	-				+4.5
1,382,589	+		IAI47_06635	0.14	+0.0
1,382,589	+		IAI47_06635	0.14	-0.3
1,382,590	-		IAI47_06635	0.14	+2.6
1,382,590	-		IAI47_06635	0.14	+0.5
1,382,592	+		IAI47_06635	0.14	-0.4
1,382,593	-		IAI47_06635	0.14	+1.2
1,382,593	-		IAI47_06635	0.14	-3.0
1,382,593	-		IAI47_06635	0.14	-2.5
1,382,620	+		IAI47_06635	0.17	-1.5
1,382,621	-		IAI47_06635	0.17	-0.7
1,382,628	+		IAI47_06635	0.18	+1.2
1,382,628	+		IAI47_06635	0.18	+2.7
1,382,628	+		IAI47_06635	0.18	-0.9
1,382,629	-		IAI47_06635	0.18	+1.4
1,382,718	+		IAI47_06635	0.27	-2.3
1,382,720	+		IAI47_06635	0.27	-2.5
1,382,720	+		IAI47_06635	0.27	-0.9
1,382,720	+		IAI47_06635	0.27	-0.7
1,382,720	+		IAI47_06635	0.27	-0.2
1,382,721	-		IAI47_06635	0.27	-1.1
1,382,721	-		IAI47_06635	0.27	+0.2
1,382,721	-		IAI47_06635	0.27	+0.8
1,382,773	+		IAI47_06635	0.33	+0.8
1,382,843	+		IAI47_06635	0.40	+0.7
1,382,843	+		IAI47_06635	0.40	+1.6
1,382,844	-		IAI47_06635	0.40	+1.0
1,382,970	+		IAI47_06635	0.53	+1.5
1,382,970	+		IAI47_06635	0.53	+0.3
1,382,971	-		IAI47_06635	0.53	-2.0
1,382,971	-		IAI47_06635	0.53	+2.5
1,382,971	-		IAI47_06635	0.53	+0.6
1,382,973	+		IAI47_06635	0.53	+1.1
1,382,973	+		IAI47_06635	0.53	+1.4
1,382,973	+		IAI47_06635	0.53	+2.5
1,382,973	+		IAI47_06635	0.53	+0.4
1,382,979	+		IAI47_06635	0.54	+1.6
1,382,979	+		IAI47_06635	0.54	-0.7
1,382,980	-		IAI47_06635	0.54	+3.2
1,382,980	-		IAI47_06635	0.54	+0.2
1,382,982	+		IAI47_06635	0.54	+0.4
1,382,982	+		IAI47_06635	0.54	-0.6
1,382,982	+		IAI47_06635	0.54	-0.2
1,382,982	+		IAI47_06635	0.54	-1.2
1,382,982	+		IAI47_06635	0.54	+0.7
1,382,982	+		IAI47_06635	0.54	+1.3
1,382,983	-		IAI47_06635	0.54	+1.1
1,382,983	-		IAI47_06635	0.54	+0.3
1,382,983	-		IAI47_06635	0.54	+0.2
1,382,983	-		IAI47_06635	0.54	+2.5
1,382,983	-		IAI47_06635	0.54	-2.9
1,383,030	+		IAI47_06635	0.59	+1.9
1,383,030	+		IAI47_06635	0.59	-0.9
1,383,031	-		IAI47_06635	0.59	+0.7
1,383,099	-		IAI47_06635	0.66	-1.1
1,383,112	+		IAI47_06635	0.68	+0.6
1,383,112	+		IAI47_06635	0.68	+0.8
1,383,112	+		IAI47_06635	0.68	+0.2
1,383,113	-		IAI47_06635	0.68	+2.4
1,383,113	-		IAI47_06635	0.68	+0.8
1,383,113	-		IAI47_06635	0.68	-2.0
1,383,192	+		IAI47_06635	0.76	+1.0
1,383,192	+		IAI47_06635	0.76	-0.1
1,383,192	+		IAI47_06635	0.76	+0.7
1,383,193	-		IAI47_06635	0.76	-0.6
1,383,193	-		IAI47_06635	0.76	+1.3
1,383,444	+				-0.3
1,383,453	-				+0.7
1,383,457	+				+2.1
1,383,457	+				-1.7
1,383,457	+				-0.3
1,383,457	+				-0.1
1,383,457	+				-1.8
1,383,457	+				+0.0
1,383,457	+				-0.7
1,383,457	+				+1.1
1,383,458	-				+1.5
1,383,458	-				+0.8
1,383,458	-				+0.2
1,383,458	-				+1.0
1,383,460	+				-0.3
1,383,460	+				+1.5
1,383,460	+				-0.7
1,383,461	-				+2.7
1,383,461	-				-0.4
1,383,463	+				-1.7
1,383,463	+				+0.0
1,383,463	+				+0.5
1,383,464	-				-0.2
1,383,464	-				+0.4
1,383,465	+				+0.2
1,383,465	+				+2.2
1,383,465	+				-0.0
1,383,465	+				+1.7
1,383,466	-				+1.4
1,383,466	-				-0.6
1,383,466	-				+1.0
1,383,516	+				+1.1
1,383,516	+				-0.9
1,383,516	+				+0.9
1,383,516	+				-1.3
1,383,517	-				-0.4
1,383,517	-				+2.2
1,383,517	-				+2.8
1,383,517	-				-1.4
1,383,517	-				-0.5
1,383,517	-				-0.3
1,383,517	-				-1.0
1,383,517	-				+0.0
1,383,532	+				+0.5
1,383,533	-				+2.3
1,383,580	+		IAI47_06640	0.14	+3.1
1,383,580	+		IAI47_06640	0.14	+1.0
1,383,584	+		IAI47_06640	0.15	-1.6
1,383,584	+		IAI47_06640	0.15	-1.1
1,383,584	+		IAI47_06640	0.15	-0.0
1,383,584	+		IAI47_06640	0.15	-1.7
1,383,585	-		IAI47_06640	0.15	+1.1
1,383,585	-		IAI47_06640	0.15	-3.2
1,383,585	-		IAI47_06640	0.15	+2.0
1,383,585	-		IAI47_06640	0.15	+2.1
1,383,585	-		IAI47_06640	0.15	-1.7
1,383,637	+		IAI47_06640	0.24	+0.8
1,383,637	+		IAI47_06640	0.24	+1.8
1,383,664	-		IAI47_06640	0.29	+0.2
1,383,698	+		IAI47_06640	0.35	-1.2
1,383,698	+		IAI47_06640	0.35	-1.2
1,383,698	+		IAI47_06640	0.35	-2.2
1,383,698	+		IAI47_06640	0.35	+1.7
1,383,751	+		IAI47_06640	0.44	+2.2
1,383,752	-		IAI47_06640	0.45	-2.4
1,383,785	-		IAI47_06640	0.50	+4.2
1,383,785	-		IAI47_06640	0.50	+0.9
1,383,792	+		IAI47_06640	0.51	-0.7
1,383,792	+		IAI47_06640	0.51	-1.8
1,383,793	-		IAI47_06640	0.52	+1.5
1,383,801	+		IAI47_06640	0.53	-0.8
1,383,802	-		IAI47_06640	0.53	+1.0
1,383,823	+		IAI47_06640	0.57	-2.7
1,383,823	+		IAI47_06640	0.57	-0.1
1,383,823	+		IAI47_06640	0.57	-1.0
1,383,824	-		IAI47_06640	0.57	-1.5
1,383,824	-		IAI47_06640	0.57	-2.6
1,383,824	-		IAI47_06640	0.57	-1.3
1,383,824	-		IAI47_06640	0.57	-3.2
1,383,825	+		IAI47_06640	0.57	+1.1
1,383,825	+		IAI47_06640	0.57	+0.1
1,383,826	-		IAI47_06640	0.57	+1.3
1,383,839	+		IAI47_06640	0.60	-1.2
1,383,839	+		IAI47_06640	0.60	-0.9
1,383,839	+		IAI47_06640	0.60	+2.1
1,383,839	+		IAI47_06640	0.60	+0.7
1,383,839	+		IAI47_06640	0.60	-1.3
1,383,839	+		IAI47_06640	0.60	-2.0
1,383,839	+		IAI47_06640	0.60	-1.7
1,383,840	-		IAI47_06640	0.60	-0.3
1,383,840	-		IAI47_06640	0.60	+0.2
1,383,840	-		IAI47_06640	0.60	+0.4
1,383,840	-		IAI47_06640	0.60	+1.8
1,383,840	-		IAI47_06640	0.60	-0.0
1,383,840	-		IAI47_06640	0.60	-0.0
1,383,840	-		IAI47_06640	0.60	-2.1
1,383,840	-		IAI47_06640	0.60	-1.3
1,383,840	-		IAI47_06640	0.60	-0.4
1,383,840	-		IAI47_06640	0.60	+0.4
1,383,840	-		IAI47_06640	0.60	+1.0
1,383,840	-		IAI47_06640	0.60	-0.6
1,383,840	-		IAI47_06640	0.60	+0.6
1,383,840	-		IAI47_06640	0.60	-1.7
1,383,840	-		IAI47_06640	0.60	+0.0
1,383,841	+		IAI47_06640	0.60	+0.0
1,383,841	+		IAI47_06640	0.60	+2.6
1,383,841	+		IAI47_06640	0.60	+0.3
1,383,841	+		IAI47_06640	0.60	-2.8
1,383,841	+		IAI47_06640	0.60	+0.9
1,383,841	+		IAI47_06640	0.60	-0.7
1,383,842	-		IAI47_06640	0.60	+0.8
1,383,842	-		IAI47_06640	0.60	+0.9
1,383,842	-		IAI47_06640	0.60	+0.5
1,383,842	-		IAI47_06640	0.60	-0.4
1,383,842	-		IAI47_06640	0.60	+0.6
1,383,842	-		IAI47_06640	0.60	-0.1
1,383,842	-		IAI47_06640	0.60	+0.8
1,383,842	-		IAI47_06640	0.60	+0.3
1,383,843	+		IAI47_06640	0.60	-1.5
1,383,843	+		IAI47_06640	0.60	+0.3
1,383,843	+		IAI47_06640	0.60	-0.5
1,383,843	+		IAI47_06640	0.60	+0.7
1,383,843	+		IAI47_06640	0.60	+1.6
1,383,843	+		IAI47_06640	0.60	+0.1
1,383,843	+		IAI47_06640	0.60	-1.7
1,383,843	+		IAI47_06640	0.60	+1.6
1,383,843	+		IAI47_06640	0.60	-2.1
1,383,843	+		IAI47_06640	0.60	-1.4
1,383,843	+		IAI47_06640	0.60	+1.4
1,383,843	+		IAI47_06640	0.60	+0.3
1,383,843	+		IAI47_06640	0.60	+2.1
1,383,843	+		IAI47_06640	0.60	+1.3
1,383,844	-		IAI47_06640	0.61	+1.8
1,383,844	-		IAI47_06640	0.61	+1.3
1,383,844	-		IAI47_06640	0.61	-0.1
1,383,844	-		IAI47_06640	0.61	-3.7
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