Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS23335 and HSERO_RS23340 are separated by 214 nucleotides HSERO_RS23340 and HSERO_RS23345 are separated by 24 nucleotides HSERO_RS23345 and HSERO_RS23350 are separated by 13 nucleotides
HSERO_RS23335: HSERO_RS23335 - cell wall shape-determining protein, at 5,356,280 to 5,357,389
_RS23335
HSERO_RS23340: HSERO_RS23340 - lipoprotein, at 5,357,604 to 5,358,740
_RS23340
HSERO_RS23345: HSERO_RS23345 - 16S rRNA methyltransferase, at 5,358,765 to 5,359,700
_RS23345
HSERO_RS23350: HSERO_RS23350 - glycosylase, at 5,359,714 to 5,360,997
_RS23350
Position (kb) 5357
5358
5359 Strain fitness (log2 ratio) -2
-1
0
1 at 5357.410 kb on + strand at 5357.699 kb on + strand at 5358.137 kb on + strand, within HSERO_RS23340 at 5358.137 kb on + strand, within HSERO_RS23340 at 5358.137 kb on + strand, within HSERO_RS23340 at 5358.174 kb on - strand, within HSERO_RS23340 at 5358.446 kb on + strand, within HSERO_RS23340 at 5358.484 kb on - strand, within HSERO_RS23340 at 5358.649 kb on - strand at 5358.722 kb on + strand at 5358.799 kb on - strand at 5358.859 kb on + strand, within HSERO_RS23345 at 5358.959 kb on + strand, within HSERO_RS23345 at 5359.134 kb on + strand, within HSERO_RS23345 at 5359.135 kb on + strand, within HSERO_RS23345 at 5359.167 kb on + strand at 5359.376 kb on + strand, within HSERO_RS23345 at 5359.550 kb on - strand, within HSERO_RS23345 at 5359.576 kb on - strand, within HSERO_RS23345 at 5359.591 kb on - strand, within HSERO_RS23345
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.001 mg/ml remove 5,357,410 + +0.4 5,357,699 + +0.4 5,358,137 + HSERO_RS23340 0.47 -0.6 5,358,137 + HSERO_RS23340 0.47 -0.3 5,358,137 + HSERO_RS23340 0.47 +0.2 5,358,174 - HSERO_RS23340 0.50 -1.1 5,358,446 + HSERO_RS23340 0.74 +1.1 5,358,484 - HSERO_RS23340 0.77 -0.4 5,358,649 - -0.9 5,358,722 + +0.5 5,358,799 - -0.0 5,358,859 + HSERO_RS23345 0.10 -0.4 5,358,959 + HSERO_RS23345 0.21 +0.4 5,359,134 + HSERO_RS23345 0.39 -0.8 5,359,135 + HSERO_RS23345 0.40 -1.2 5,359,167 + +0.9 5,359,376 + HSERO_RS23345 0.65 -1.7 5,359,550 - HSERO_RS23345 0.84 +0.2 5,359,576 - HSERO_RS23345 0.87 -2.3 5,359,591 - HSERO_RS23345 0.88 -0.8
Or see this region's nucleotide sequence