Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS22385 and HSERO_RS22390 are separated by 58 nucleotides HSERO_RS22390 and HSERO_RS22395 are separated by 174 nucleotides HSERO_RS22395 and HSERO_RS22400 overlap by 4 nucleotides
HSERO_RS22385: HSERO_RS22385 - GMC family oxidoreductase, at 5,122,442 to 5,124,223
_RS22385
HSERO_RS22390: HSERO_RS22390 - alcohol dehydrogenase, at 5,124,282 to 5,125,682
_RS22390
HSERO_RS22395: HSERO_RS22395 - RNA polymerase sigma factor, at 5,125,857 to 5,126,366
_RS22395
HSERO_RS22400: HSERO_RS22400 - Fe2+-dicitrate sensor membrane protein, at 5,126,363 to 5,127,343
_RS22400
Position (kb) 5124
5125
5126 Strain fitness (log2 ratio) -1
0
1
2 at 5123.660 kb on - strand, within HSERO_RS22385 at 5123.709 kb on + strand, within HSERO_RS22385 at 5123.759 kb on - strand, within HSERO_RS22385 at 5123.951 kb on + strand, within HSERO_RS22385 at 5123.951 kb on + strand, within HSERO_RS22385 at 5124.104 kb on - strand at 5124.157 kb on - strand at 5124.225 kb on - strand at 5124.369 kb on - strand at 5124.455 kb on - strand, within HSERO_RS22390 at 5124.490 kb on + strand, within HSERO_RS22390 at 5124.567 kb on + strand, within HSERO_RS22390 at 5124.586 kb on + strand, within HSERO_RS22390 at 5124.948 kb on + strand, within HSERO_RS22390 at 5124.949 kb on + strand, within HSERO_RS22390 at 5124.957 kb on - strand, within HSERO_RS22390 at 5125.135 kb on - strand, within HSERO_RS22390 at 5125.154 kb on + strand, within HSERO_RS22390 at 5125.155 kb on + strand, within HSERO_RS22390 at 5125.214 kb on + strand, within HSERO_RS22390 at 5125.503 kb on - strand, within HSERO_RS22390 at 5125.545 kb on - strand at 5125.564 kb on + strand at 5125.579 kb on + strand at 5125.587 kb on - strand at 5125.615 kb on + strand at 5125.615 kb on + strand at 5125.839 kb on + strand at 5125.847 kb on - strand at 5125.929 kb on + strand, within HSERO_RS22395 at 5125.960 kb on + strand, within HSERO_RS22395 at 5126.063 kb on + strand, within HSERO_RS22395 at 5126.271 kb on + strand, within HSERO_RS22395 at 5126.307 kb on - strand, within HSERO_RS22395 at 5126.339 kb on - strand at 5126.365 kb on + strand at 5126.521 kb on + strand at 5126.521 kb on + strand, within HSERO_RS22400 at 5126.608 kb on + strand, within HSERO_RS22400 at 5126.631 kb on + strand, within HSERO_RS22400 at 5126.637 kb on - strand, within HSERO_RS22400
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.001 mg/ml remove 5,123,660 - HSERO_RS22385 0.68 -0.1 5,123,709 + HSERO_RS22385 0.71 +0.4 5,123,759 - HSERO_RS22385 0.74 -0.5 5,123,951 + HSERO_RS22385 0.85 +0.4 5,123,951 + HSERO_RS22385 0.85 -0.4 5,124,104 - +2.3 5,124,157 - -0.5 5,124,225 - -1.0 5,124,369 - +0.2 5,124,455 - HSERO_RS22390 0.12 +0.0 5,124,490 + HSERO_RS22390 0.15 +0.1 5,124,567 + HSERO_RS22390 0.20 +0.1 5,124,586 + HSERO_RS22390 0.22 +1.0 5,124,948 + HSERO_RS22390 0.48 +1.1 5,124,949 + HSERO_RS22390 0.48 -1.7 5,124,957 - HSERO_RS22390 0.48 -0.1 5,125,135 - HSERO_RS22390 0.61 -0.2 5,125,154 + HSERO_RS22390 0.62 +0.2 5,125,155 + HSERO_RS22390 0.62 +0.2 5,125,214 + HSERO_RS22390 0.67 -0.0 5,125,503 - HSERO_RS22390 0.87 +1.1 5,125,545 - -1.0 5,125,564 + +0.2 5,125,579 + +0.4 5,125,587 - +1.7 5,125,615 + -1.2 5,125,615 + +0.6 5,125,839 + -0.5 5,125,847 - -0.3 5,125,929 + HSERO_RS22395 0.14 +0.3 5,125,960 + HSERO_RS22395 0.20 -0.3 5,126,063 + HSERO_RS22395 0.40 +0.4 5,126,271 + HSERO_RS22395 0.81 -0.0 5,126,307 - HSERO_RS22395 0.88 -0.6 5,126,339 - +0.6 5,126,365 + -0.0 5,126,521 + +1.8 5,126,521 + HSERO_RS22400 0.16 +2.1 5,126,608 + HSERO_RS22400 0.25 -0.2 5,126,631 + HSERO_RS22400 0.27 -0.6 5,126,637 - HSERO_RS22400 0.28 -0.3
Or see this region's nucleotide sequence