Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS21070

Experiment: Thallium(I) acetate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Thallium(I) acetate 0.001 mg/ml
4,818,847	-		HSERO_RS21065	0.12	+0.6
4,819,024	-		HSERO_RS21065	0.29	+0.6
4,819,140	+		HSERO_RS21065	0.41	-1.1
4,819,140	+		HSERO_RS21065	0.41	-0.1
4,819,148	-		HSERO_RS21065	0.41	+0.3
4,819,331	-		HSERO_RS21065	0.59	+0.7
4,819,460	+		HSERO_RS21065	0.72	-0.7
4,819,571	+		HSERO_RS21065	0.83	-1.0
4,819,571	+		HSERO_RS21065	0.83	-1.0
4,819,584	-		HSERO_RS21065	0.84	-0.1
4,819,584	-		HSERO_RS21065	0.84	-0.1
4,819,751	-				+0.9
4,819,775	+				+0.2
4,819,780	+				-0.3
4,819,852	+		HSERO_RS21070	0.11	+0.4
4,820,031	-		HSERO_RS21070	0.29	+1.1
4,820,079	-		HSERO_RS21070	0.33	+1.7
4,820,149	+		HSERO_RS21070	0.40	+2.7
4,820,157	-		HSERO_RS21070	0.41	+1.0
4,820,157	-		HSERO_RS21070	0.41	+1.1
4,820,253	+		HSERO_RS21070	0.51	+0.6
4,820,292	+		HSERO_RS21070	0.54	-0.2
4,820,332	+		HSERO_RS21070	0.58	-0.0
4,820,370	+		HSERO_RS21070	0.62	+0.7
4,820,375	-		HSERO_RS21070	0.63	+0.6
4,820,380	+		HSERO_RS21070	0.63	+1.7
4,820,380	+		HSERO_RS21070	0.63	+0.4
4,820,397	-		HSERO_RS21070	0.65	+1.2
4,820,508	-		HSERO_RS21070	0.76	+1.0
4,820,523	-		HSERO_RS21070	0.77	+0.9
4,820,546	-		HSERO_RS21070	0.80	+0.5
4,820,565	+		HSERO_RS21070	0.81	-1.0
4,820,565	+		HSERO_RS21070	0.81	+0.2
4,820,600	-		HSERO_RS21070	0.85	+1.7
4,820,610	-		HSERO_RS21070	0.86	+0.1
4,820,640	-		HSERO_RS21070	0.89	+1.0
4,820,658	+				+1.1
4,820,666	-				+0.6
4,820,699	+				-0.2
4,820,700	+				+0.1
4,820,700	+				+0.5
4,820,700	-				+1.6
4,820,708	-				+1.2
4,820,807	-				-0.5
4,821,003	-		HSERO_RS21075	0.11	+0.3
4,821,259	-		HSERO_RS21075	0.25	-1.3
4,821,262	+		HSERO_RS21075	0.25	-1.6
4,821,270	-		HSERO_RS21075	0.26	-1.2
4,821,270	-		HSERO_RS21075	0.26	-0.1
4,821,410	+		HSERO_RS21075	0.33	-1.4
4,821,438	+		HSERO_RS21075	0.35	+1.2
4,821,588	-		HSERO_RS21075	0.42	-0.7
4,821,613	-		HSERO_RS21075	0.44	-0.4
4,821,619	+		HSERO_RS21075	0.44	-2.3
4,821,711	-		HSERO_RS21075	0.49	+0.3