Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS19480 and HSERO_RS19485 are separated by 128 nucleotides HSERO_RS19485 and HSERO_RS19490 are separated by 84 nucleotides HSERO_RS19490 and HSERO_RS19495 are separated by 77 nucleotides
HSERO_RS19480: HSERO_RS19480 - membrane protein, at 4,463,928 to 4,464,881
_RS19480
HSERO_RS19485: HSERO_RS19485 - ubiquinone/menaquinone biosynthesis methyltransferase, at 4,465,010 to 4,465,744
_RS19485
HSERO_RS19490: HSERO_RS19490 - hypothetical protein, at 4,465,829 to 4,466,251
_RS19490
HSERO_RS19495: HSERO_RS19495 - histidine triad (HIT) protein, at 4,466,329 to 4,466,781
_RS19495
Position (kb) 4465
4466 Strain fitness (log2 ratio) -1
0
1 at 4464.039 kb on - strand, within HSERO_RS19480 at 4464.039 kb on - strand, within HSERO_RS19480 at 4464.252 kb on + strand, within HSERO_RS19480 at 4464.437 kb on - strand, within HSERO_RS19480 at 4464.613 kb on - strand, within HSERO_RS19480 at 4464.668 kb on - strand, within HSERO_RS19480 at 4464.668 kb on - strand, within HSERO_RS19480 at 4464.891 kb on - strand at 4465.790 kb on + strand at 4465.820 kb on + strand at 4466.004 kb on + strand, within HSERO_RS19490 at 4466.443 kb on - strand, within HSERO_RS19495 at 4466.550 kb on + strand, within HSERO_RS19495 at 4466.608 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.001 mg/ml remove 4,464,039 - HSERO_RS19480 0.12 -0.5 4,464,039 - HSERO_RS19480 0.12 -1.0 4,464,252 + HSERO_RS19480 0.34 +0.1 4,464,437 - HSERO_RS19480 0.53 -0.8 4,464,613 - HSERO_RS19480 0.72 +0.1 4,464,668 - HSERO_RS19480 0.78 +0.2 4,464,668 - HSERO_RS19480 0.78 -0.3 4,464,891 - -0.1 4,465,790 + +0.1 4,465,820 + -0.1 4,466,004 + HSERO_RS19490 0.41 -0.4 4,466,443 - HSERO_RS19495 0.25 -0.3 4,466,550 + HSERO_RS19495 0.49 -1.0 4,466,608 - -0.2
Or see this region's nucleotide sequence