Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS14350 and HSERO_RS14355 are separated by 11 nucleotides HSERO_RS14355 and HSERO_RS14360 overlap by 4 nucleotides HSERO_RS14360 and HSERO_RS14365 are separated by 17 nucleotides HSERO_RS14365 and HSERO_RS14370 are separated by 17 nucleotides
HSERO_RS14350: HSERO_RS14350 - cysteine desulfurase, at 3,252,485 to 3,253,624
_RS14350
HSERO_RS14355: HSERO_RS14355 - hypothetical protein, at 3,253,636 to 3,254,010
_RS14355
HSERO_RS14360: HSERO_RS14360 - iron-sulfur cofactor synthesis protein, at 3,254,007 to 3,254,255
_RS14360
HSERO_RS14365: HSERO_RS14365 - nitrogen fixation protein NifZ, at 3,254,273 to 3,254,569
_RS14365
HSERO_RS14370: HSERO_RS14370 - hypothetical protein, at 3,254,587 to 3,255,345
_RS14370
Position (kb) 3253
3254
3255 Strain fitness (log2 ratio) -1
0
1 at 3252.728 kb on - strand, within HSERO_RS14350 at 3252.834 kb on - strand, within HSERO_RS14350 at 3252.834 kb on - strand, within HSERO_RS14350 at 3252.869 kb on + strand, within HSERO_RS14350 at 3253.003 kb on + strand, within HSERO_RS14350 at 3253.080 kb on - strand, within HSERO_RS14350 at 3253.284 kb on + strand, within HSERO_RS14350 at 3253.330 kb on + strand, within HSERO_RS14350 at 3253.476 kb on + strand, within HSERO_RS14350 at 3253.543 kb on - strand at 3253.614 kb on + strand at 3253.650 kb on + strand at 3253.677 kb on + strand, within HSERO_RS14355 at 3253.684 kb on + strand, within HSERO_RS14355 at 3253.845 kb on - strand, within HSERO_RS14355 at 3253.845 kb on - strand, within HSERO_RS14355 at 3253.975 kb on + strand at 3254.501 kb on - strand, within HSERO_RS14365 at 3254.668 kb on + strand, within HSERO_RS14370 at 3254.764 kb on - strand, within HSERO_RS14370 at 3254.846 kb on + strand, within HSERO_RS14370
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.001 mg/ml remove 3,252,728 - HSERO_RS14350 0.21 +1.1 3,252,834 - HSERO_RS14350 0.31 +0.2 3,252,834 - HSERO_RS14350 0.31 +0.0 3,252,869 + HSERO_RS14350 0.34 -0.8 3,253,003 + HSERO_RS14350 0.45 -1.0 3,253,080 - HSERO_RS14350 0.52 -1.2 3,253,284 + HSERO_RS14350 0.70 -1.5 3,253,330 + HSERO_RS14350 0.74 -1.5 3,253,476 + HSERO_RS14350 0.87 +0.6 3,253,543 - +0.9 3,253,614 + -0.3 3,253,650 + +0.4 3,253,677 + HSERO_RS14355 0.11 -0.6 3,253,684 + HSERO_RS14355 0.13 +0.4 3,253,845 - HSERO_RS14355 0.56 +0.8 3,253,845 - HSERO_RS14355 0.56 -0.5 3,253,975 + -0.2 3,254,501 - HSERO_RS14365 0.77 +0.7 3,254,668 + HSERO_RS14370 0.11 -0.3 3,254,764 - HSERO_RS14370 0.23 -0.1 3,254,846 + HSERO_RS14370 0.34 -0.6
Or see this region's nucleotide sequence