Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS13110 and HSERO_RS13115 are separated by 41 nucleotides HSERO_RS13115 and HSERO_RS13120 are separated by 78 nucleotides HSERO_RS13120 and HSERO_RS13125 are separated by 10 nucleotides HSERO_RS13125 and HSERO_RS13130 are separated by 77 nucleotides
HSERO_RS13110: HSERO_RS13110 - chemotaxis protein, at 2,989,285 to 2,990,775
_RS13110
HSERO_RS13115: HSERO_RS13115 - GCN5 family acetyltransferase, at 2,990,817 to 2,991,242
_RS13115
HSERO_RS13120: HSERO_RS13120 - aromatic compound catabolic protein, at 2,991,321 to 2,991,755
_RS13120
HSERO_RS13125: HSERO_RS13125 - stress responsive protein, at 2,991,766 to 2,992,068
_RS13125
HSERO_RS13130: HSERO_RS13130 - LysR family transcriptional regulator, at 2,992,146 to 2,993,006
_RS13130
Position (kb)
2991
2992 Strain fitness (log2 ratio)
-1
0
1 at 2990.440 kb on + strand, within HSERO_RS13110 at 2990.524 kb on + strand, within HSERO_RS13110 at 2990.564 kb on + strand, within HSERO_RS13110 at 2990.684 kb on - strand at 2990.757 kb on + strand at 2990.800 kb on - strand at 2990.913 kb on - strand, within HSERO_RS13115 at 2991.843 kb on - strand, within HSERO_RS13125 at 2991.994 kb on - strand, within HSERO_RS13125 at 2992.010 kb on - strand, within HSERO_RS13125 at 2992.513 kb on + strand, within HSERO_RS13130 at 2992.615 kb on + strand, within HSERO_RS13130 at 2992.681 kb on + strand, within HSERO_RS13130 at 2992.747 kb on - strand, within HSERO_RS13130
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.001 mg/ml remove 2,990,440 + HSERO_RS13110 0.77 +0.9 2,990,524 + HSERO_RS13110 0.83 +0.4 2,990,564 + HSERO_RS13110 0.86 -0.2 2,990,684 - -0.9 2,990,757 + +1.3 2,990,800 - -1.0 2,990,913 - HSERO_RS13115 0.23 +1.7 2,991,843 - HSERO_RS13125 0.25 -0.3 2,991,994 - HSERO_RS13125 0.75 -1.7 2,992,010 - HSERO_RS13125 0.81 -1.0 2,992,513 + HSERO_RS13130 0.43 +1.0 2,992,615 + HSERO_RS13130 0.54 -1.3 2,992,681 + HSERO_RS13130 0.62 -0.8 2,992,747 - HSERO_RS13130 0.70 +0.3
Or see this region's nucleotide sequence