Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS07770

Experiment: Thallium(I) acetate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Thallium(I) acetate 0.001 mg/ml
1,778,619	-				-0.2
1,778,678	-		HSERO_RS07765	0.15	-0.7
1,778,756	-		HSERO_RS07765	0.27	-0.3
1,778,784	+		HSERO_RS07765	0.31	-0.2
1,778,802	-		HSERO_RS07765	0.34	-0.2
1,778,807	-		HSERO_RS07765	0.35	-0.5
1,778,966	-		HSERO_RS07765	0.60	-0.7
1,779,052	-		HSERO_RS07765	0.73	-0.1
1,779,201	-				-1.0
1,779,233	-				-0.4
1,779,330	+				-2.5
1,779,355	+				-0.1
1,779,373	-				-1.4
1,779,379	-				-0.4
1,779,440	+				-0.0
1,779,443	+				-0.4
1,779,443	-				-0.1
1,779,499	+				+0.3
1,779,499	+				+0.3
1,779,550	-				-0.3
1,779,619	+				-3.3
1,779,733	+				-0.7
1,779,780	+				+0.8
1,780,086	-		HSERO_RS07770	0.24	+0.1
1,780,249	-		HSERO_RS07770	0.32	-3.0
1,780,331	-		HSERO_RS07770	0.36	-0.5
1,780,446	-		HSERO_RS07770	0.42	-0.9
1,780,446	-		HSERO_RS07770	0.42	+1.0
1,780,446	-		HSERO_RS07770	0.42	-1.2
1,780,453	-		HSERO_RS07770	0.42	+0.3
1,780,474	+				+1.1
1,780,491	+		HSERO_RS07770	0.44	-0.9
1,780,492	-		HSERO_RS07770	0.44	-0.3
1,780,526	+		HSERO_RS07770	0.46	-0.2
1,780,643	-		HSERO_RS07770	0.52	+1.5
1,780,661	-		HSERO_RS07770	0.53	-1.2
1,780,687	+		HSERO_RS07770	0.54	-0.1
1,780,687	+		HSERO_RS07770	0.54	+0.1
1,780,695	-		HSERO_RS07770	0.55	-0.1
1,780,695	-		HSERO_RS07770	0.55	+0.3
1,780,785	+				+0.1
1,780,828	-		HSERO_RS07770	0.61	+0.9
1,780,883	-		HSERO_RS07770	0.64	+0.8
1,780,924	-		HSERO_RS07770	0.66	-0.1
1,781,043	-		HSERO_RS07770	0.72	+1.1
1,781,324	+		HSERO_RS07770	0.86	+0.4
1,781,339	-		HSERO_RS07770	0.87	-0.1
1,781,544	-				-0.8
1,781,581	-				-0.1
1,781,583	-				+1.1
1,781,651	-				+0.3
1,781,656	-				-0.3
1,781,749	+				-0.8
1,781,997	+				-0.6
1,782,171	+				+0.8
1,782,187	-				-0.2
1,782,303	-				-0.8
1,782,306	+				+0.0
1,782,311	+				-0.1
1,782,319	+				+0.2
1,782,319	+				+0.1
1,782,319	+				+0.1
1,782,388	+				-0.8
1,782,390	+				-0.0
1,782,390	+				-0.1
1,782,396	-				-0.0
1,782,396	-				-0.1
1,782,396	-				-0.1
1,782,396	-				+0.7
1,782,398	-				-0.1
1,782,413	+		HSERO_RS07780	0.11	-0.2
1,782,415	+		HSERO_RS07780	0.11	+0.4
1,782,431	-		HSERO_RS07780	0.13	-0.2
1,782,493	+		HSERO_RS07780	0.21	+0.3
1,782,493	+		HSERO_RS07780	0.21	+0.1
1,782,495	+		HSERO_RS07780	0.22	+0.4
1,782,516	-		HSERO_RS07780	0.24	+0.5
1,782,532	+		HSERO_RS07780	0.26	+0.3
1,782,532	+		HSERO_RS07780	0.26	-0.3
1,782,532	+		HSERO_RS07780	0.26	-0.3
1,782,540	-		HSERO_RS07780	0.27	+1.2
1,782,540	-		HSERO_RS07780	0.27	-0.5
1,782,542	-		HSERO_RS07780	0.28	-0.9
1,782,546	+		HSERO_RS07780	0.28	-0.1
1,782,547	+		HSERO_RS07780	0.28	-0.2
1,782,554	-		HSERO_RS07780	0.29	+0.7
1,782,564	-		HSERO_RS07780	0.31	-0.4