Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS05025

Experiment: Thallium(I) acetate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Thallium(I) acetate 0.001 mg/ml
1,110,134	-		HSERO_RS05020	0.31	+2.1
1,110,341	+		HSERO_RS05020	0.53	+0.5
1,110,354	-		HSERO_RS05020	0.55	+1.5
1,110,487	+		HSERO_RS05020	0.69	-0.4
1,110,663	+		HSERO_RS05020	0.88	-0.8
1,110,911	-				-0.8
1,111,000	+				+0.2
1,111,070	-				-0.0
1,111,320	+		HSERO_RS05025	0.23	-0.5
1,111,348	+				+0.3
1,111,459	+		HSERO_RS05025	0.39	+1.0
1,111,554	+		HSERO_RS05025	0.50	-0.2
1,111,562	-		HSERO_RS05025	0.51	-0.7
1,111,845	-		HSERO_RS05025	0.84	+1.1
1,111,976	-				+0.3
1,112,274	+		HSERO_RS05030	0.22	+0.1
1,112,279	+		HSERO_RS05030	0.23	-0.3
1,112,381	-		HSERO_RS05030	0.32	-0.3
1,112,398	-		HSERO_RS05030	0.33	-0.2
1,112,497	-		HSERO_RS05030	0.42	+0.1
1,112,548	+		HSERO_RS05030	0.46	-0.4
1,112,626	-		HSERO_RS05030	0.53	-0.3
1,112,656	+		HSERO_RS05030	0.55	-0.6
1,112,664	-		HSERO_RS05030	0.56	+0.2
1,112,712	-		HSERO_RS05030	0.60	+0.0
1,112,926	-		HSERO_RS05030	0.79	+0.6