Experiment: Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS00935 and HSERO_RS00940 are separated by 224 nucleotides HSERO_RS00940 and HSERO_RS00945 are separated by 109 nucleotides HSERO_RS00945 and HSERO_RS00950 are separated by 339 nucleotides
HSERO_RS00935: HSERO_RS00935 - TonB-denpendent receptor, at 197,841 to 199,955
_RS00935
HSERO_RS00940: HSERO_RS00940 - general secretion pathway protein, at 200,180 to 200,647
_RS00940
HSERO_RS00945: HSERO_RS00945 - frataxin, at 200,757 to 201,089
_RS00945
HSERO_RS00950: HSERO_RS00950 - diaminopimelate decarboxylase, at 201,429 to 202,721
_RS00950
Position (kb) 200
201 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 199.344 kb on + strand, within HSERO_RS00935 at 199.351 kb on + strand, within HSERO_RS00935 at 199.448 kb on + strand, within HSERO_RS00935 at 199.473 kb on + strand, within HSERO_RS00935 at 199.596 kb on + strand, within HSERO_RS00935 at 199.661 kb on + strand, within HSERO_RS00935 at 199.669 kb on - strand, within HSERO_RS00935 at 199.686 kb on - strand, within HSERO_RS00935 at 199.740 kb on - strand, within HSERO_RS00935 at 199.764 kb on + strand at 199.798 kb on + strand at 199.846 kb on - strand at 199.858 kb on + strand at 199.925 kb on - strand at 199.977 kb on - strand at 200.064 kb on - strand at 200.183 kb on + strand at 200.197 kb on + strand at 200.282 kb on - strand, within HSERO_RS00940 at 200.284 kb on + strand, within HSERO_RS00940 at 200.343 kb on + strand, within HSERO_RS00940 at 200.390 kb on + strand, within HSERO_RS00940 at 200.508 kb on + strand, within HSERO_RS00940 at 200.627 kb on + strand at 200.799 kb on - strand, within HSERO_RS00945 at 201.052 kb on - strand, within HSERO_RS00945 at 201.288 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.001 mg/ml remove 199,344 + HSERO_RS00935 0.71 +0.2 199,351 + HSERO_RS00935 0.71 -0.6 199,448 + HSERO_RS00935 0.76 -0.0 199,473 + HSERO_RS00935 0.77 -0.3 199,596 + HSERO_RS00935 0.83 -0.3 199,661 + HSERO_RS00935 0.86 +0.3 199,669 - HSERO_RS00935 0.86 +0.2 199,686 - HSERO_RS00935 0.87 -0.5 199,740 - HSERO_RS00935 0.90 -0.2 199,764 + +0.6 199,798 + -0.4 199,846 - +0.5 199,858 + -0.3 199,925 - +0.5 199,977 - +0.9 200,064 - -0.3 200,183 + +0.5 200,197 + +1.2 200,282 - HSERO_RS00940 0.22 -1.1 200,284 + HSERO_RS00940 0.22 -3.5 200,343 + HSERO_RS00940 0.35 +1.9 200,390 + HSERO_RS00940 0.45 -0.8 200,508 + HSERO_RS00940 0.70 -0.0 200,627 + -0.3 200,799 - HSERO_RS00945 0.13 +0.9 201,052 - HSERO_RS00945 0.89 -0.1 201,288 + +0.4
Or see this region's nucleotide sequence