Experiment: D-Trehalose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_19295 and AO356_19300 are separated by 269 nucleotides AO356_19300 and AO356_19305 are separated by 293 nucleotides AO356_19305 and AO356_19310 are separated by 102 nucleotides
AO356_19295: AO356_19295 - hypothetical protein, at 4,328,495 to 4,330,300
_19295
AO356_19300: AO356_19300 - peptidylprolyl isomerase, at 4,330,570 to 4,331,283
_19300
AO356_19305: AO356_19305 - hypothetical protein, at 4,331,577 to 4,332,032
_19305
AO356_19310: AO356_19310 - Cro/Cl family transcriptional regulator, at 4,332,135 to 4,332,476
_19310
Position (kb) 4330
4331
4332 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4329.705 kb on + strand, within AO356_19295 at 4329.706 kb on - strand, within AO356_19295 at 4329.706 kb on - strand, within AO356_19295 at 4329.706 kb on - strand, within AO356_19295 at 4329.719 kb on + strand, within AO356_19295 at 4329.719 kb on + strand, within AO356_19295 at 4329.756 kb on + strand, within AO356_19295 at 4329.757 kb on - strand, within AO356_19295 at 4329.757 kb on - strand, within AO356_19295 at 4329.757 kb on - strand, within AO356_19295 at 4329.757 kb on - strand, within AO356_19295 at 4329.757 kb on - strand, within AO356_19295 at 4329.757 kb on - strand, within AO356_19295 at 4329.757 kb on - strand, within AO356_19295 at 4329.757 kb on - strand, within AO356_19295 at 4329.757 kb on - strand, within AO356_19295 at 4329.757 kb on - strand, within AO356_19295 at 4329.759 kb on + strand, within AO356_19295 at 4329.759 kb on + strand, within AO356_19295 at 4329.759 kb on + strand, within AO356_19295 at 4329.760 kb on - strand, within AO356_19295 at 4329.763 kb on + strand, within AO356_19295 at 4329.763 kb on + strand, within AO356_19295 at 4329.763 kb on + strand, within AO356_19295 at 4329.764 kb on - strand, within AO356_19295 at 4329.809 kb on + strand, within AO356_19295 at 4329.810 kb on - strand, within AO356_19295 at 4329.814 kb on + strand, within AO356_19295 at 4329.814 kb on + strand, within AO356_19295 at 4329.815 kb on - strand, within AO356_19295 at 4329.815 kb on - strand, within AO356_19295 at 4329.815 kb on - strand, within AO356_19295 at 4329.823 kb on + strand, within AO356_19295 at 4329.823 kb on + strand, within AO356_19295 at 4329.823 kb on + strand, within AO356_19295 at 4329.823 kb on + strand, within AO356_19295 at 4329.823 kb on + strand, within AO356_19295 at 4329.823 kb on + strand, within AO356_19295 at 4329.823 kb on + strand, within AO356_19295 at 4329.823 kb on + strand, within AO356_19295 at 4329.823 kb on + strand, within AO356_19295 at 4329.823 kb on + strand, within AO356_19295 at 4329.823 kb on + strand, within AO356_19295 at 4329.823 kb on + strand, within AO356_19295 at 4329.823 kb on + strand, within AO356_19295 at 4329.824 kb on - strand, within AO356_19295 at 4329.824 kb on - strand, within AO356_19295 at 4329.884 kb on + strand, within AO356_19295 at 4329.885 kb on - strand, within AO356_19295 at 4329.885 kb on - strand, within AO356_19295 at 4329.896 kb on - strand, within AO356_19295 at 4330.038 kb on + strand, within AO356_19295 at 4330.038 kb on + strand, within AO356_19295 at 4330.098 kb on + strand, within AO356_19295 at 4330.137 kb on + strand at 4330.137 kb on + strand at 4330.137 kb on + strand at 4330.137 kb on + strand at 4330.137 kb on + strand at 4330.137 kb on + strand at 4330.138 kb on - strand at 4330.138 kb on - strand at 4330.138 kb on - strand at 4330.138 kb on - strand at 4330.140 kb on + strand at 4330.140 kb on + strand at 4330.141 kb on - strand at 4330.141 kb on - strand at 4330.176 kb on + strand at 4330.176 kb on + strand at 4330.177 kb on - strand at 4330.177 kb on - strand at 4330.177 kb on - strand at 4330.177 kb on - strand at 4330.177 kb on - strand at 4330.199 kb on - strand at 4330.200 kb on + strand at 4330.200 kb on + strand at 4330.200 kb on + strand at 4330.200 kb on + strand at 4330.200 kb on + strand at 4330.200 kb on + strand at 4330.200 kb on + strand at 4330.201 kb on - strand at 4330.201 kb on - strand at 4330.201 kb on - strand at 4330.201 kb on - strand at 4330.201 kb on - strand at 4330.201 kb on - strand at 4330.201 kb on - strand at 4330.201 kb on - strand at 4330.227 kb on + strand at 4330.227 kb on + strand at 4330.227 kb on + strand at 4330.228 kb on - strand at 4330.228 kb on - strand at 4330.228 kb on - strand at 4330.230 kb on + strand at 4330.230 kb on + strand at 4330.332 kb on - strand at 4330.403 kb on + strand at 4330.403 kb on + strand at 4330.403 kb on + strand at 4330.404 kb on - strand at 4330.407 kb on + strand at 4330.407 kb on + strand at 4330.407 kb on + strand at 4330.408 kb on - strand at 4330.440 kb on + strand at 4330.465 kb on + strand at 4330.465 kb on + strand at 4330.465 kb on + strand at 4330.465 kb on + strand at 4330.466 kb on - strand at 4330.466 kb on - strand at 4330.466 kb on - strand at 4330.466 kb on - strand at 4330.517 kb on + strand at 4330.518 kb on - strand at 4330.518 kb on - strand at 4330.531 kb on + strand at 4330.532 kb on - strand at 4330.547 kb on - strand at 4330.566 kb on + strand at 4330.566 kb on + strand at 4330.566 kb on + strand at 4330.566 kb on + strand at 4330.566 kb on + strand at 4330.566 kb on + strand at 4330.566 kb on + strand at 4330.566 kb on + strand at 4330.566 kb on + strand at 4330.566 kb on + strand at 4330.567 kb on - strand at 4330.567 kb on - strand at 4330.616 kb on + strand at 4330.617 kb on - strand at 4330.646 kb on + strand, within AO356_19300 at 4330.646 kb on + strand, within AO356_19300 at 4330.646 kb on + strand, within AO356_19300 at 4330.647 kb on - strand, within AO356_19300 at 4330.647 kb on - strand, within AO356_19300 at 4330.678 kb on + strand, within AO356_19300 at 4330.678 kb on + strand, within AO356_19300 at 4330.678 kb on + strand, within AO356_19300 at 4330.683 kb on + strand, within AO356_19300 at 4330.684 kb on - strand, within AO356_19300 at 4330.684 kb on - strand, within AO356_19300 at 4330.926 kb on + strand, within AO356_19300 at 4330.926 kb on + strand, within AO356_19300 at 4330.951 kb on + strand, within AO356_19300 at 4330.952 kb on - strand, within AO356_19300 at 4330.987 kb on - strand, within AO356_19300 at 4330.987 kb on - strand, within AO356_19300 at 4330.987 kb on - strand, within AO356_19300 at 4330.987 kb on - strand, within AO356_19300 at 4331.000 kb on + strand, within AO356_19300 at 4331.000 kb on + strand, within AO356_19300 at 4331.000 kb on + strand, within AO356_19300 at 4331.000 kb on + strand, within AO356_19300 at 4331.000 kb on + strand, within AO356_19300 at 4331.000 kb on + strand, within AO356_19300 at 4331.001 kb on - strand, within AO356_19300 at 4331.001 kb on - strand, within AO356_19300 at 4331.001 kb on - strand, within AO356_19300 at 4331.001 kb on - strand, within AO356_19300 at 4331.014 kb on + strand, within AO356_19300 at 4331.014 kb on + strand, within AO356_19300 at 4331.014 kb on + strand, within AO356_19300 at 4331.015 kb on - strand, within AO356_19300 at 4331.015 kb on - strand, within AO356_19300 at 4331.015 kb on - strand, within AO356_19300 at 4331.146 kb on + strand, within AO356_19300 at 4331.146 kb on + strand, within AO356_19300 at 4331.146 kb on + strand, within AO356_19300 at 4331.146 kb on + strand, within AO356_19300 at 4331.147 kb on - strand, within AO356_19300 at 4331.147 kb on - strand, within AO356_19300 at 4331.147 kb on - strand, within AO356_19300 at 4331.155 kb on + strand, within AO356_19300 at 4331.155 kb on + strand, within AO356_19300 at 4331.155 kb on + strand, within AO356_19300 at 4331.155 kb on + strand, within AO356_19300 at 4331.155 kb on + strand, within AO356_19300 at 4331.155 kb on + strand, within AO356_19300 at 4331.155 kb on + strand, within AO356_19300 at 4331.156 kb on - strand, within AO356_19300 at 4331.156 kb on - strand, within AO356_19300 at 4331.156 kb on - strand, within AO356_19300 at 4331.156 kb on - strand, within AO356_19300 at 4331.177 kb on - strand, within AO356_19300 at 4331.281 kb on + strand at 4331.282 kb on - strand at 4331.282 kb on - strand at 4331.282 kb on - strand at 4331.294 kb on + strand at 4331.294 kb on + strand at 4331.294 kb on + strand at 4331.294 kb on + strand at 4331.294 kb on + strand at 4331.295 kb on - strand at 4331.379 kb on + strand at 4331.380 kb on - strand at 4331.380 kb on - strand at 4331.387 kb on + strand at 4331.387 kb on + strand at 4331.388 kb on - strand at 4331.388 kb on - strand at 4331.388 kb on - strand at 4331.394 kb on + strand at 4331.394 kb on + strand at 4331.394 kb on + strand at 4331.395 kb on - strand at 4331.395 kb on - strand at 4331.395 kb on - strand at 4331.439 kb on + strand at 4331.453 kb on - strand at 4331.749 kb on - strand, within AO356_19305 at 4331.814 kb on + strand, within AO356_19305 at 4331.814 kb on + strand, within AO356_19305 at 4331.814 kb on + strand, within AO356_19305 at 4331.814 kb on + strand, within AO356_19305 at 4331.814 kb on + strand, within AO356_19305 at 4331.815 kb on - strand, within AO356_19305 at 4331.815 kb on - strand, within AO356_19305 at 4331.815 kb on - strand, within AO356_19305 at 4331.815 kb on - strand, within AO356_19305 at 4332.073 kb on + strand at 4332.073 kb on + strand at 4332.073 kb on + strand at 4332.073 kb on + strand at 4332.074 kb on - strand at 4332.079 kb on + strand at 4332.079 kb on + strand at 4332.079 kb on + strand at 4332.079 kb on + strand at 4332.080 kb on - strand at 4332.108 kb on + strand at 4332.108 kb on + strand at 4332.108 kb on + strand at 4332.108 kb on + strand at 4332.108 kb on + strand at 4332.109 kb on - strand at 4332.109 kb on - strand at 4332.109 kb on - strand at 4332.109 kb on - strand at 4332.148 kb on + strand at 4332.149 kb on - strand at 4332.149 kb on - strand at 4332.199 kb on - strand, within AO356_19310
Per-strain Table
Position Strand Gene LocusTag Fraction D-Trehalose (C) remove 4,329,705 + AO356_19295 0.67 +1.0 4,329,706 - AO356_19295 0.67 +1.1 4,329,706 - AO356_19295 0.67 -0.6 4,329,706 - AO356_19295 0.67 +0.1 4,329,719 + AO356_19295 0.68 -0.5 4,329,719 + AO356_19295 0.68 +0.0 4,329,756 + AO356_19295 0.70 +0.6 4,329,757 - AO356_19295 0.70 +0.1 4,329,757 - AO356_19295 0.70 -0.1 4,329,757 - AO356_19295 0.70 -0.3 4,329,757 - AO356_19295 0.70 +0.6 4,329,757 - AO356_19295 0.70 +0.0 4,329,757 - AO356_19295 0.70 -0.3 4,329,757 - AO356_19295 0.70 -0.8 4,329,757 - AO356_19295 0.70 -0.3 4,329,757 - AO356_19295 0.70 +0.6 4,329,757 - AO356_19295 0.70 +0.7 4,329,759 + AO356_19295 0.70 -0.5 4,329,759 + AO356_19295 0.70 -1.0 4,329,759 + AO356_19295 0.70 -0.4 4,329,760 - AO356_19295 0.70 +2.3 4,329,763 + AO356_19295 0.70 -0.4 4,329,763 + AO356_19295 0.70 -0.3 4,329,763 + AO356_19295 0.70 +0.4 4,329,764 - AO356_19295 0.70 +1.4 4,329,809 + AO356_19295 0.73 +1.1 4,329,810 - AO356_19295 0.73 +1.9 4,329,814 + AO356_19295 0.73 -0.1 4,329,814 + AO356_19295 0.73 +0.0 4,329,815 - AO356_19295 0.73 -0.5 4,329,815 - AO356_19295 0.73 -0.0 4,329,815 - AO356_19295 0.73 -0.3 4,329,823 + AO356_19295 0.74 -0.8 4,329,823 + AO356_19295 0.74 -0.7 4,329,823 + AO356_19295 0.74 +1.3 4,329,823 + AO356_19295 0.74 -0.2 4,329,823 + AO356_19295 0.74 +0.8 4,329,823 + AO356_19295 0.74 -0.9 4,329,823 + AO356_19295 0.74 -0.5 4,329,823 + AO356_19295 0.74 -0.0 4,329,823 + AO356_19295 0.74 -0.8 4,329,823 + AO356_19295 0.74 +0.2 4,329,823 + AO356_19295 0.74 +0.4 4,329,823 + AO356_19295 0.74 -0.0 4,329,823 + AO356_19295 0.74 +0.1 4,329,824 - AO356_19295 0.74 -0.3 4,329,824 - AO356_19295 0.74 +0.1 4,329,884 + AO356_19295 0.77 +0.6 4,329,885 - AO356_19295 0.77 -0.3 4,329,885 - AO356_19295 0.77 -0.2 4,329,896 - AO356_19295 0.78 +0.0 4,330,038 + AO356_19295 0.85 -0.2 4,330,038 + AO356_19295 0.85 -1.3 4,330,098 + AO356_19295 0.89 -0.3 4,330,137 + +0.7 4,330,137 + +0.8 4,330,137 + -0.4 4,330,137 + -0.5 4,330,137 + +0.7 4,330,137 + -0.1 4,330,138 - +0.7 4,330,138 - -0.8 4,330,138 - +1.6 4,330,138 - -0.4 4,330,140 + -0.2 4,330,140 + +0.3 4,330,141 - +0.0 4,330,141 - +0.6 4,330,176 + +0.4 4,330,176 + +0.6 4,330,177 - +1.1 4,330,177 - +0.2 4,330,177 - -0.5 4,330,177 - +0.5 4,330,177 - -0.3 4,330,199 - +0.9 4,330,200 + -1.8 4,330,200 + +0.3 4,330,200 + +0.8 4,330,200 + +0.6 4,330,200 + -0.8 4,330,200 + +0.4 4,330,200 + -0.0 4,330,201 - +0.7 4,330,201 - +0.0 4,330,201 - -0.2 4,330,201 - +0.0 4,330,201 - +0.2 4,330,201 - +0.8 4,330,201 - +1.0 4,330,201 - -0.1 4,330,227 + -1.0 4,330,227 + +1.6 4,330,227 + -0.6 4,330,228 - +1.1 4,330,228 - +0.1 4,330,228 - +1.0 4,330,230 + -0.3 4,330,230 + -0.5 4,330,332 - -0.3 4,330,403 + -0.9 4,330,403 + -0.4 4,330,403 + +0.1 4,330,404 - -0.3 4,330,407 + +0.0 4,330,407 + -0.3 4,330,407 + -1.3 4,330,408 - +0.2 4,330,440 + +0.2 4,330,465 + -0.1 4,330,465 + -2.0 4,330,465 + +0.3 4,330,465 + +1.0 4,330,466 - +0.2 4,330,466 - -0.2 4,330,466 - +0.1 4,330,466 - +1.0 4,330,517 + -0.2 4,330,518 - +0.4 4,330,518 - +0.3 4,330,531 + -0.2 4,330,532 - +0.0 4,330,547 - +0.7 4,330,566 + +0.0 4,330,566 + -0.4 4,330,566 + +0.2 4,330,566 + +0.6 4,330,566 + +0.4 4,330,566 + +0.1 4,330,566 + +0.3 4,330,566 + +0.1 4,330,566 + +1.0 4,330,566 + +0.8 4,330,567 - +0.2 4,330,567 - +0.3 4,330,616 + +0.3 4,330,617 - +0.2 4,330,646 + AO356_19300 0.11 +1.1 4,330,646 + AO356_19300 0.11 +1.2 4,330,646 + AO356_19300 0.11 +0.1 4,330,647 - AO356_19300 0.11 +0.3 4,330,647 - AO356_19300 0.11 +0.5 4,330,678 + AO356_19300 0.15 +1.3 4,330,678 + AO356_19300 0.15 +0.4 4,330,678 + AO356_19300 0.15 -0.7 4,330,683 + AO356_19300 0.16 +0.3 4,330,684 - AO356_19300 0.16 +1.1 4,330,684 - AO356_19300 0.16 +0.7 4,330,926 + AO356_19300 0.50 +2.7 4,330,926 + AO356_19300 0.50 -1.0 4,330,951 + AO356_19300 0.53 -0.0 4,330,952 - AO356_19300 0.54 +0.5 4,330,987 - AO356_19300 0.58 +0.4 4,330,987 - AO356_19300 0.58 -0.1 4,330,987 - AO356_19300 0.58 -1.0 4,330,987 - AO356_19300 0.58 -0.3 4,331,000 + AO356_19300 0.60 +0.4 4,331,000 + AO356_19300 0.60 +1.0 4,331,000 + AO356_19300 0.60 +0.3 4,331,000 + AO356_19300 0.60 +0.6 4,331,000 + AO356_19300 0.60 +0.8 4,331,000 + AO356_19300 0.60 +0.0 4,331,001 - AO356_19300 0.60 +0.4 4,331,001 - AO356_19300 0.60 -0.3 4,331,001 - AO356_19300 0.60 +0.8 4,331,001 - AO356_19300 0.60 -0.6 4,331,014 + AO356_19300 0.62 +0.1 4,331,014 + AO356_19300 0.62 -0.0 4,331,014 + AO356_19300 0.62 +0.6 4,331,015 - AO356_19300 0.62 -0.0 4,331,015 - AO356_19300 0.62 +0.1 4,331,015 - AO356_19300 0.62 +0.7 4,331,146 + AO356_19300 0.81 +1.5 4,331,146 + AO356_19300 0.81 +0.3 4,331,146 + AO356_19300 0.81 +1.0 4,331,146 + AO356_19300 0.81 +0.8 4,331,147 - AO356_19300 0.81 +1.0 4,331,147 - AO356_19300 0.81 +0.7 4,331,147 - AO356_19300 0.81 +0.6 4,331,155 + AO356_19300 0.82 +0.4 4,331,155 + AO356_19300 0.82 +0.4 4,331,155 + AO356_19300 0.82 -0.2 4,331,155 + AO356_19300 0.82 +0.7 4,331,155 + AO356_19300 0.82 +0.7 4,331,155 + AO356_19300 0.82 +0.7 4,331,155 + AO356_19300 0.82 +1.2 4,331,156 - AO356_19300 0.82 -0.3 4,331,156 - AO356_19300 0.82 -0.2 4,331,156 - AO356_19300 0.82 +1.3 4,331,156 - AO356_19300 0.82 -0.1 4,331,177 - AO356_19300 0.85 +0.5 4,331,281 + -0.4 4,331,282 - -0.1 4,331,282 - +0.5 4,331,282 - -0.6 4,331,294 + -0.4 4,331,294 + +0.4 4,331,294 + +0.2 4,331,294 + -0.4 4,331,294 + -0.5 4,331,295 - -0.7 4,331,379 + -0.0 4,331,380 - +0.5 4,331,380 - +0.3 4,331,387 + -1.2 4,331,387 + -0.2 4,331,388 - +0.4 4,331,388 - +0.7 4,331,388 - +0.4 4,331,394 + +0.1 4,331,394 + -1.4 4,331,394 + +0.6 4,331,395 - +1.2 4,331,395 - -0.1 4,331,395 - +0.0 4,331,439 + -0.0 4,331,453 - -0.1 4,331,749 - AO356_19305 0.38 +0.7 4,331,814 + AO356_19305 0.52 +0.4 4,331,814 + AO356_19305 0.52 -0.3 4,331,814 + AO356_19305 0.52 -1.6 4,331,814 + AO356_19305 0.52 -0.0 4,331,814 + AO356_19305 0.52 -0.4 4,331,815 - AO356_19305 0.52 -0.3 4,331,815 - AO356_19305 0.52 +0.0 4,331,815 - AO356_19305 0.52 -0.2 4,331,815 - AO356_19305 0.52 -0.1 4,332,073 + -0.2 4,332,073 + +0.5 4,332,073 + +0.8 4,332,073 + +0.6 4,332,074 - +0.4 4,332,079 + -1.8 4,332,079 + -0.2 4,332,079 + +1.0 4,332,079 + +0.3 4,332,080 - +1.2 4,332,108 + +0.2 4,332,108 + -0.7 4,332,108 + -1.1 4,332,108 + +0.5 4,332,108 + -0.6 4,332,109 - +0.7 4,332,109 - +1.4 4,332,109 - +1.2 4,332,109 - +0.3 4,332,148 + -0.4 4,332,149 - -0.4 4,332,149 - +1.3 4,332,199 - AO356_19310 0.19 +0.4
Or see this region's nucleotide sequence