Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_18990

Experiment: D-Trehalose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose (C)
4,269,398	-		AO356_18985	0.30	-0.4
4,269,398	-		AO356_18985	0.30	+0.5
4,269,398	-		AO356_18985	0.30	-0.5
4,269,398	-		AO356_18985	0.30	-0.6
4,269,433	+		AO356_18985	0.33	+0.9
4,269,433	+		AO356_18985	0.33	-0.5
4,269,433	+		AO356_18985	0.33	+0.4
4,269,433	+		AO356_18985	0.33	+0.3
4,269,433	+		AO356_18985	0.33	+0.4
4,269,433	+		AO356_18985	0.33	+0.8
4,269,434	-		AO356_18985	0.33	+0.5
4,269,434	-		AO356_18985	0.33	+0.1
4,269,434	-		AO356_18985	0.33	+0.9
4,269,434	-		AO356_18985	0.33	-0.2
4,269,434	-		AO356_18985	0.33	+0.5
4,269,435	+		AO356_18985	0.33	+1.1
4,269,435	+		AO356_18985	0.33	+0.1
4,269,435	+		AO356_18985	0.33	+0.2
4,269,435	+		AO356_18985	0.33	+0.9
4,269,435	+		AO356_18985	0.33	-0.3
4,269,436	-		AO356_18985	0.34	-0.7
4,269,436	-		AO356_18985	0.34	+0.7
4,269,436	-		AO356_18985	0.34	-1.0
4,269,436	-		AO356_18985	0.34	-0.7
4,269,436	-		AO356_18985	0.34	+0.4
4,269,463	+		AO356_18985	0.36	-0.3
4,269,463	+		AO356_18985	0.36	-0.3
4,269,463	+		AO356_18985	0.36	+0.1
4,269,464	-		AO356_18985	0.36	+0.2
4,269,464	-		AO356_18985	0.36	+0.1
4,269,464	-		AO356_18985	0.36	+0.0
4,269,464	-		AO356_18985	0.36	-0.2
4,269,742	+		AO356_18985	0.59	-0.1
4,269,742	+		AO356_18985	0.59	-0.2
4,269,742	+		AO356_18985	0.59	+0.3
4,269,742	+		AO356_18985	0.59	+0.3
4,269,742	+		AO356_18985	0.59	+0.4
4,269,742	+		AO356_18985	0.59	-0.6
4,269,743	-		AO356_18985	0.59	+0.6
4,269,743	-		AO356_18985	0.59	-0.8
4,269,743	-		AO356_18985	0.59	+1.1
4,269,743	-		AO356_18985	0.59	+0.3
4,269,743	-		AO356_18985	0.59	-0.9
4,269,748	+		AO356_18985	0.60	-0.6
4,269,748	+		AO356_18985	0.60	-0.4
4,269,749	-		AO356_18985	0.60	-0.4
4,269,749	-		AO356_18985	0.60	-0.0
4,270,014	-		AO356_18985	0.82	+0.8
4,270,119	+				-0.6
4,270,119	+				+0.1
4,270,144	-				+0.4
4,270,144	-				-0.1
4,270,338	+				+0.7
4,270,338	+				-0.1
4,270,338	+				-2.4
4,270,339	-				+0.3
4,270,339	-				+0.3
4,270,372	+				+0.6
4,270,372	+				+0.6
4,270,372	+				-0.6
4,270,372	+				+0.9
4,270,373	-				-0.8
4,270,373	-				-1.3
4,270,373	-				-0.0
4,270,470	+		AO356_18990	0.27	-0.3
4,270,470	+		AO356_18990	0.27	+0.1
4,270,470	+		AO356_18990	0.27	+0.9
4,270,470	+		AO356_18990	0.27	+1.1
4,270,470	+		AO356_18990	0.27	+0.0
4,270,470	+		AO356_18990	0.27	+0.7
4,270,470	+		AO356_18990	0.27	+0.7
4,270,470	+		AO356_18990	0.27	+0.3
4,270,471	-		AO356_18990	0.27	-0.4
4,270,471	-		AO356_18990	0.27	+0.4
4,270,471	-		AO356_18990	0.27	+1.3
4,270,471	-		AO356_18990	0.27	-0.3
4,270,471	-		AO356_18990	0.27	+0.3
4,270,471	-		AO356_18990	0.27	+0.6
4,270,471	-		AO356_18990	0.27	+0.5
4,270,471	-		AO356_18990	0.27	-0.4
4,270,471	-		AO356_18990	0.27	-0.9
4,270,471	-		AO356_18990	0.27	-0.3
4,270,471	-		AO356_18990	0.27	-0.4
4,270,471	-		AO356_18990	0.27	-0.2
4,270,476	+		AO356_18990	0.28	+1.1
4,270,476	+		AO356_18990	0.28	-0.1
4,270,476	+		AO356_18990	0.28	+0.8
4,270,477	-		AO356_18990	0.28	-1.5
4,270,477	-		AO356_18990	0.28	-0.3
4,270,477	-		AO356_18990	0.28	+0.0
4,270,477	-		AO356_18990	0.28	+1.2
4,270,506	+		AO356_18990	0.34	+0.2
4,270,506	+		AO356_18990	0.34	-0.7
4,270,536	+		AO356_18990	0.40	+0.5
4,270,537	-		AO356_18990	0.40	-0.4
4,270,537	-		AO356_18990	0.40	-1.4
4,270,814	-				-1.1
4,270,858	+				+0.8
4,270,858	+				+0.0
4,270,859	-				+0.5
4,270,859	-				-1.5
4,270,859	-				+0.1
4,270,964	-				+0.4
4,270,976	+				+0.1
4,270,976	+				+0.3
4,270,977	-				-0.2
4,270,977	-				-0.5
4,270,988	+				-0.2
4,270,988	+				+0.2
4,270,990	+				-0.8
4,270,991	-				-0.2
4,270,991	-				+0.3
4,271,134	+		AO356_18995	0.26	+0.3
4,271,134	+		AO356_18995	0.26	+0.1
4,271,135	-		AO356_18995	0.26	-0.7
4,271,135	-		AO356_18995	0.26	-1.9
4,271,135	-		AO356_18995	0.26	+0.3
4,271,135	-		AO356_18995	0.26	+0.3
4,271,135	-		AO356_18995	0.26	-1.0
4,271,143	+		AO356_18995	0.27	-1.0
4,271,143	+		AO356_18995	0.27	+0.1
4,271,143	+		AO356_18995	0.27	+0.4
4,271,144	-		AO356_18995	0.27	+0.2
4,271,144	-		AO356_18995	0.27	-0.3
4,271,144	-		AO356_18995	0.27	-1.5
4,271,152	+		AO356_18995	0.29	+0.3
4,271,152	+		AO356_18995	0.29	+0.1
4,271,153	-		AO356_18995	0.29	+0.1
4,271,153	-		AO356_18995	0.29	-0.9
4,271,153	-		AO356_18995	0.29	-0.3
4,271,242	+		AO356_18995	0.43	-0.9
4,271,242	+		AO356_18995	0.43	-0.3
4,271,242	+		AO356_18995	0.43	-1.3
4,271,243	-		AO356_18995	0.44	-0.5
4,271,243	-		AO356_18995	0.44	-1.1
4,271,243	-		AO356_18995	0.44	+1.3
4,271,243	-		AO356_18995	0.44	+0.5
4,271,351	-		AO356_18995	0.62	+0.2
4,271,351	-		AO356_18995	0.62	-0.6
4,271,491	+		AO356_18995	0.85	-0.3
4,271,491	+		AO356_18995	0.85	-0.2
4,271,491	+		AO356_18995	0.85	-0.3
4,271,491	+		AO356_18995	0.85	-0.4
4,271,491	+		AO356_18995	0.85	-1.4
4,271,491	+		AO356_18995	0.85	-1.9
4,271,491	+		AO356_18995	0.85	+0.5
4,271,492	-		AO356_18995	0.85	-0.0
4,271,492	-		AO356_18995	0.85	-0.3
4,271,582	+				+0.2
4,271,582	+				-0.4
4,271,582	+				+0.1
4,271,582	+				-1.9
4,271,582	+				+0.8
4,271,583	-				-1.1
4,271,583	-				+0.0
4,271,583	-				+0.2
4,271,601	+				-0.6
4,271,648	+				+0.3
4,271,648	+				-0.1
4,271,648	+				-0.2
4,271,648	+				-1.7
4,271,652	+				+0.2
4,271,652	+				+0.3
4,271,652	+				+0.9
4,271,652	+				+0.8
4,271,652	+				+0.3
4,271,653	-				-0.1
4,271,653	-				+0.9
4,271,653	-				-0.1
4,271,653	-				+1.5
4,271,653	-				-0.0
4,271,665	-				+1.6
4,271,701	+				-1.3
4,271,778	+				-0.4