Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_09865

Experiment: D-Trehalose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose (C)
2,231,253	+		AO356_09855	0.29	+1.5
2,231,253	+		AO356_09855	0.29	+1.6
2,231,253	+		AO356_09855	0.29	+1.8
2,231,253	+		AO356_09855	0.29	+0.8
2,231,253	+		AO356_09855	0.29	+0.5
2,231,253	+		AO356_09855	0.29	+0.7
2,231,253	+		AO356_09855	0.29	+1.4
2,231,253	+		AO356_09855	0.29	+1.1
2,231,253	+		AO356_09855	0.29	+1.5
2,231,253	+		AO356_09855	0.29	+1.2
2,231,253	+		AO356_09855	0.29	+1.7
2,231,253	+		AO356_09855	0.29	+1.6
2,231,253	+		AO356_09855	0.29	+1.6
2,231,253	+		AO356_09855	0.29	+1.3
2,231,253	+		AO356_09855	0.29	+1.3
2,231,253	+		AO356_09855	0.29	+1.2
2,231,253	+		AO356_09855	0.29	+0.3
2,231,253	+		AO356_09855	0.29	+1.7
2,231,253	+		AO356_09855	0.29	+1.4
2,231,253	+		AO356_09855	0.29	+1.0
2,231,253	+		AO356_09855	0.29	+1.1
2,231,253	+		AO356_09855	0.29	+1.7
2,231,253	+		AO356_09855	0.29	+0.2
2,231,253	+		AO356_09855	0.29	+0.8
2,231,253	+		AO356_09855	0.29	+1.3
2,231,253	+		AO356_09855	0.29	+2.0
2,231,253	+		AO356_09855	0.29	+0.8
2,231,253	+		AO356_09855	0.29	+0.3
2,231,253	+		AO356_09855	0.29	+1.9
2,231,253	+		AO356_09855	0.29	+2.3
2,231,254	-		AO356_09855	0.29	-0.3
2,231,254	-		AO356_09855	0.29	-0.2
2,231,254	-		AO356_09855	0.29	+0.1
2,231,254	-		AO356_09855	0.29	-0.5
2,231,254	-		AO356_09855	0.29	-0.1
2,231,254	-		AO356_09855	0.29	-0.1
2,231,254	-		AO356_09855	0.29	+1.1
2,231,254	-		AO356_09855	0.29	-0.2
2,231,254	-		AO356_09855	0.29	-0.1
2,231,254	-		AO356_09855	0.29	-0.2
2,231,254	-		AO356_09855	0.29	+0.2
2,231,254	-		AO356_09855	0.29	-0.1
2,231,254	-		AO356_09855	0.29	+0.0
2,231,254	-		AO356_09855	0.29	+0.2
2,231,254	-		AO356_09855	0.29	-1.2
2,231,254	-		AO356_09855	0.29	-0.5
2,231,254	-		AO356_09855	0.29	-0.2
2,231,254	-		AO356_09855	0.29	-0.0
2,231,254	-		AO356_09855	0.29	-0.1
2,231,254	-		AO356_09855	0.29	-0.3
2,231,254	-		AO356_09855	0.29	-1.4
2,231,254	-		AO356_09855	0.29	-0.3
2,231,254	-		AO356_09855	0.29	+0.6
2,231,254	-		AO356_09855	0.29	+0.3
2,231,254	-		AO356_09855	0.29	-0.1
2,231,254	-		AO356_09855	0.29	+0.6
2,231,254	-		AO356_09855	0.29	-1.3
2,231,254	-		AO356_09855	0.29	+0.5
2,231,254	-		AO356_09855	0.29	+0.2
2,231,254	-		AO356_09855	0.29	-0.3
2,231,254	-		AO356_09855	0.29	+0.3
2,231,254	-		AO356_09855	0.29	+0.4
2,231,349	+		AO356_09855	0.58	+1.9
2,231,350	-		AO356_09855	0.58	+1.1
2,231,356	+		AO356_09855	0.60	+1.5
2,231,357	-		AO356_09855	0.61	+0.2
2,231,357	-		AO356_09855	0.61	+0.4
2,231,391	+		AO356_09855	0.71	+0.8
2,231,391	+		AO356_09855	0.71	+1.8
2,231,391	+		AO356_09855	0.71	+2.3
2,231,391	+		AO356_09855	0.71	+1.7
2,231,391	+		AO356_09855	0.71	+1.6
2,231,391	+		AO356_09855	0.71	+2.0
2,231,392	-		AO356_09855	0.71	+0.6
2,231,392	-		AO356_09855	0.71	+0.2
2,231,392	-		AO356_09855	0.71	+0.6
2,231,517	+				+0.8
2,231,533	+				-0.2
2,231,533	+				+0.7
2,231,533	+				+0.8
2,231,534	-				-0.1
2,231,534	-				+0.3
2,231,534	-				-0.2
2,231,534	-				-0.8
2,231,534	-				-0.5
2,231,534	-				+0.4
2,231,534	-				-0.4
2,231,542	+				+1.5
2,231,542	+				+1.0
2,231,542	+				+1.0
2,231,543	-				-0.6
2,231,543	-				-0.9
2,231,579	-				-0.4
2,231,579	-				+0.2
2,231,727	+		AO356_09860	0.23	+0.7
2,231,727	+		AO356_09860	0.23	+1.3
2,231,728	-		AO356_09860	0.23	+0.5
2,231,730	+		AO356_09860	0.24	-0.2
2,231,730	+		AO356_09860	0.24	-0.2
2,231,731	-		AO356_09860	0.24	+0.3
2,231,731	-		AO356_09860	0.24	+1.1
2,231,739	+		AO356_09860	0.25	+1.4
2,231,739	+		AO356_09860	0.25	+1.2
2,231,739	+		AO356_09860	0.25	+0.7
2,231,740	-		AO356_09860	0.25	+0.8
2,231,740	-		AO356_09860	0.25	+0.6
2,231,740	-		AO356_09860	0.25	-0.3
2,231,740	-		AO356_09860	0.25	+0.0
2,231,767	+		AO356_09860	0.30	+0.6
2,231,767	+		AO356_09860	0.30	+1.1
2,231,767	+		AO356_09860	0.30	-0.0
2,231,768	-		AO356_09860	0.30	+1.4
2,231,768	-		AO356_09860	0.30	-0.3
2,231,768	-		AO356_09860	0.30	-0.2
2,231,861	+		AO356_09860	0.45	+1.9
2,231,861	+		AO356_09860	0.45	-0.7
2,231,861	+		AO356_09860	0.45	+0.4
2,231,861	+		AO356_09860	0.45	-0.1
2,231,861	+		AO356_09860	0.45	+0.9
2,231,862	-		AO356_09860	0.46	-0.6
2,231,862	-		AO356_09860	0.46	-0.9
2,231,862	-		AO356_09860	0.46	-0.4
2,231,862	-		AO356_09860	0.46	-1.2
2,231,862	-		AO356_09860	0.46	-0.5
2,231,862	-		AO356_09860	0.46	-0.5
2,231,862	-		AO356_09860	0.46	+2.3
2,231,864	+		AO356_09860	0.46	+0.9
2,231,934	+		AO356_09860	0.57	+1.4
2,231,934	+		AO356_09860	0.57	+2.4
2,231,934	+		AO356_09860	0.57	+1.0
2,231,934	+		AO356_09860	0.57	+1.0
2,231,934	+		AO356_09860	0.57	+1.5
2,231,934	+		AO356_09860	0.57	+0.3
2,231,934	+		AO356_09860	0.57	+1.0
2,231,935	-		AO356_09860	0.58	-1.2
2,231,935	-		AO356_09860	0.58	-0.9
2,231,935	-		AO356_09860	0.58	-1.0
2,232,011	+		AO356_09860	0.70	+0.2
2,232,011	+		AO356_09860	0.70	+0.7
2,232,036	+		AO356_09860	0.74	+0.1
2,232,036	+		AO356_09860	0.74	+1.7
2,232,036	+		AO356_09860	0.74	+2.0
2,232,036	+		AO356_09860	0.74	+1.3
2,232,037	-		AO356_09860	0.74	-1.2
2,232,037	-		AO356_09860	0.74	-1.0
2,232,037	-		AO356_09860	0.74	-0.7
2,232,037	-		AO356_09860	0.74	+0.1
2,232,078	+		AO356_09860	0.81	+0.3
2,232,079	-		AO356_09860	0.81	+0.8
2,232,181	+				-1.2
2,232,181	+				+0.5
2,232,181	+				-0.7
2,232,182	-				+1.7
2,232,182	-				+0.7
2,232,182	-				+0.6
2,232,182	-				+0.2
2,232,187	+				-0.4
2,232,187	+				-1.3
2,232,187	+				+1.1
2,232,187	+				-0.1
2,232,187	+				-0.2
2,232,188	-				-1.1
2,232,188	-				+0.3
2,232,188	-				+0.3
2,232,188	-				-2.4
2,232,285	+				+0.8
2,232,699	-		AO356_09865	0.23	+0.4
2,232,699	-		AO356_09865	0.23	-0.5
2,232,699	-		AO356_09865	0.23	-0.1
2,232,764	+		AO356_09865	0.26	-0.4
2,232,764	+		AO356_09865	0.26	+0.5
2,232,764	+		AO356_09865	0.26	+0.5
2,232,764	+		AO356_09865	0.26	-1.1
2,232,764	+		AO356_09865	0.26	-0.7
2,232,765	-		AO356_09865	0.26	-1.5
2,232,765	-		AO356_09865	0.26	-0.9
2,232,765	-		AO356_09865	0.26	-1.2
2,232,819	-		AO356_09865	0.28	+0.1
2,232,857	+		AO356_09865	0.30	-0.0
2,232,858	-		AO356_09865	0.30	-1.5
2,232,858	-		AO356_09865	0.30	+0.3
2,232,959	+		AO356_09865	0.34	-0.3
2,232,959	+		AO356_09865	0.34	-0.1
2,232,959	+		AO356_09865	0.34	-0.4
2,232,959	+		AO356_09865	0.34	-1.2
2,232,959	+		AO356_09865	0.34	+0.0
2,232,960	-		AO356_09865	0.35	-0.3
2,232,978	+		AO356_09865	0.35	+0.3
2,232,978	+		AO356_09865	0.35	-0.8
2,232,979	-		AO356_09865	0.35	-0.1
2,232,979	-		AO356_09865	0.35	-0.1
2,232,979	-		AO356_09865	0.35	+0.6
2,232,979	-		AO356_09865	0.35	+0.5
2,232,979	-		AO356_09865	0.35	+0.2
2,233,428	-		AO356_09865	0.55	+1.1
2,233,636	+		AO356_09865	0.65	+0.2
2,233,937	-		AO356_09865	0.78	+0.9
2,233,961	+		AO356_09865	0.79	-0.6
2,233,962	-		AO356_09865	0.79	-1.3
2,233,962	-		AO356_09865	0.79	-0.5
2,234,020	-		AO356_09865	0.82	-0.5
2,234,236	+				+0.8
2,234,237	-				+0.2
2,234,318	+				-0.2
2,234,318	+				-0.0
2,234,318	+				-1.1
2,234,318	+				-0.1
2,234,319	-				+0.4
2,234,319	-				+0.2
2,234,319	-				+0.6
2,234,319	-				+0.5
2,234,319	-				-0.4
2,234,319	-				-1.6
2,234,319	-				-0.0
2,234,319	-				-1.0
2,234,401	+				-0.3
2,234,401	+				-0.2
2,234,556	+		AO356_09870	0.21	-1.6
2,234,556	+		AO356_09870	0.21	+1.4
2,234,556	+		AO356_09870	0.21	+0.8
2,234,557	-		AO356_09870	0.21	+0.7
2,234,595	+		AO356_09870	0.30	+0.6
2,234,595	+		AO356_09870	0.30	-1.4
2,234,595	+		AO356_09870	0.30	+0.0
2,234,595	+		AO356_09870	0.30	-1.7
2,234,596	-		AO356_09870	0.30	-0.1
2,234,596	-		AO356_09870	0.30	+1.6
2,234,596	-		AO356_09870	0.30	+0.4
2,234,596	-		AO356_09870	0.30	+0.2
2,234,669	+		AO356_09870	0.46	-0.1
2,234,669	+		AO356_09870	0.46	-0.9
2,234,669	+		AO356_09870	0.46	+0.7
2,234,669	+		AO356_09870	0.46	-0.6
2,234,669	+		AO356_09870	0.46	+0.5
2,234,669	+		AO356_09870	0.46	+0.2
2,234,669	+		AO356_09870	0.46	-0.1
2,234,669	+		AO356_09870	0.46	+0.7
2,234,669	+		AO356_09870	0.46	+0.1
2,234,669	+		AO356_09870	0.46	+1.0
2,234,670	-		AO356_09870	0.46	-0.2
2,234,670	-		AO356_09870	0.46	+0.8
2,234,670	-		AO356_09870	0.46	-0.3
2,234,670	-		AO356_09870	0.46	-0.4
2,234,778	+		AO356_09870	0.70	-0.1
2,234,907	+				-1.4
2,234,908	-				+0.0
2,234,920	+				-0.3
2,234,921	-				+0.1
2,235,022	+		AO356_09875	0.23	+0.9
2,235,022	+		AO356_09875	0.23	-0.4
2,235,022	+		AO356_09875	0.23	-0.1
2,235,022	+		AO356_09875	0.23	-0.6
2,235,022	+		AO356_09875	0.23	+0.0
2,235,022	+		AO356_09875	0.23	+1.5
2,235,022	+		AO356_09875	0.23	-1.4
2,235,022	+		AO356_09875	0.23	-0.1
2,235,022	+		AO356_09875	0.23	-0.1
2,235,022	+		AO356_09875	0.23	+0.4
2,235,023	-		AO356_09875	0.23	-0.4
2,235,023	-		AO356_09875	0.23	-0.5
2,235,023	-		AO356_09875	0.23	+0.2
2,235,023	-		AO356_09875	0.23	+0.2
2,235,023	-		AO356_09875	0.23	+0.8
2,235,023	-		AO356_09875	0.23	+0.4
2,235,023	-		AO356_09875	0.23	+0.2
2,235,023	-		AO356_09875	0.23	-0.7
2,235,046	+		AO356_09875	0.28	+0.3
2,235,046	+		AO356_09875	0.28	+0.5
2,235,046	+		AO356_09875	0.28	+0.2
2,235,046	+		AO356_09875	0.28	+1.9
2,235,046	+		AO356_09875	0.28	-0.1
2,235,047	-		AO356_09875	0.28	+1.0
2,235,047	-		AO356_09875	0.28	-1.2
2,235,047	-		AO356_09875	0.28	+1.0
2,235,127	+		AO356_09875	0.46	+0.0
2,235,127	+		AO356_09875	0.46	+0.0
2,235,127	+		AO356_09875	0.46	-0.2
2,235,127	+		AO356_09875	0.46	-0.2
2,235,128	-		AO356_09875	0.46	-0.0
2,235,128	-		AO356_09875	0.46	+1.2
2,235,128	-		AO356_09875	0.46	+0.4
2,235,128	-		AO356_09875	0.46	-1.5
2,235,128	-		AO356_09875	0.46	+0.1
2,235,128	-		AO356_09875	0.46	+0.8
2,235,128	-		AO356_09875	0.46	-1.1
2,235,169	+		AO356_09875	0.56	+0.3
2,235,169	+		AO356_09875	0.56	+0.6
2,235,169	+		AO356_09875	0.56	-0.4
2,235,170	-		AO356_09875	0.56	+0.6
2,235,170	-		AO356_09875	0.56	-0.1
2,235,226	+		AO356_09875	0.68	-0.7
2,235,226	+		AO356_09875	0.68	-0.4
2,235,226	+		AO356_09875	0.68	+1.7
2,235,226	+		AO356_09875	0.68	-0.5
2,235,226	+		AO356_09875	0.68	-0.1
2,235,226	+		AO356_09875	0.68	-0.6
2,235,226	+		AO356_09875	0.68	-0.3
2,235,226	+		AO356_09875	0.68	-0.2
2,235,227	-		AO356_09875	0.68	-0.3
2,235,227	-		AO356_09875	0.68	+0.3
2,235,227	-		AO356_09875	0.68	+0.0
2,235,227	-		AO356_09875	0.68	+0.8
2,235,227	-		AO356_09875	0.68	-0.5
2,235,227	-		AO356_09875	0.68	-0.6
2,235,227	-		AO356_09875	0.68	+0.5
2,235,227	-		AO356_09875	0.68	-0.1
2,235,227	-		AO356_09875	0.68	+0.6
2,235,227	-		AO356_09875	0.68	+0.1
2,235,227	-		AO356_09875	0.68	-0.2
2,235,227	-		AO356_09875	0.68	-0.0
2,235,230	+		AO356_09875	0.69	-0.5
2,235,230	+		AO356_09875	0.69	+0.6
2,235,230	+		AO356_09875	0.69	-0.6
2,235,230	+		AO356_09875	0.69	-0.3
2,235,230	+		AO356_09875	0.69	+0.6
2,235,230	+		AO356_09875	0.69	+0.1
2,235,230	+		AO356_09875	0.69	-0.2
2,235,230	+		AO356_09875	0.69	-0.3
2,235,230	+		AO356_09875	0.69	-0.4
2,235,230	+		AO356_09875	0.69	-0.2
2,235,230	+		AO356_09875	0.69	+1.7
2,235,230	+		AO356_09875	0.69	+0.2
2,235,230	+		AO356_09875	0.69	-0.3
2,235,231	-		AO356_09875	0.69	+0.4
2,235,231	-		AO356_09875	0.69	+0.1
2,235,231	-		AO356_09875	0.69	+0.2
2,235,231	-		AO356_09875	0.69	-0.8
2,235,231	-		AO356_09875	0.69	+0.2
2,235,231	-		AO356_09875	0.69	+0.3
2,235,231	-		AO356_09875	0.69	+0.2
2,235,231	-		AO356_09875	0.69	-1.0
2,235,231	-		AO356_09875	0.69	+0.3
2,235,277	-		AO356_09875	0.80	-1.9
2,235,352	+				+0.2
2,235,353	-				-1.0
2,235,359	+				-0.5
2,235,359	+				+1.7
2,235,359	+				+0.9
2,235,359	+				+0.6
2,235,359	+				+0.0
2,235,400	+				-0.5
2,235,400	+				-0.5
2,235,400	+				-0.3
2,235,400	+				+0.3
2,235,400	+				-0.1
2,235,400	+				-0.4
2,235,400	+				-1.2
2,235,400	+				+0.9
2,235,400	+				+0.8
2,235,400	+				+0.3
2,235,400	+				+0.1
2,235,400	+				+0.3
2,235,401	-				-0.3
2,235,401	-				+1.4
2,235,401	-				+0.3
2,235,401	-				+0.8
2,235,401	-				+0.3
2,235,401	-				+0.3
2,235,401	-				-0.1
2,235,401	-				-0.2
2,235,401	-				-0.8
2,235,401	-				+1.3