Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_07985

Experiment: D-Trehalose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose (C)
1,788,734	+		AO356_07980	0.12	+0.1
1,788,734	+		AO356_07980	0.12	+0.1
1,788,734	+		AO356_07980	0.12	+0.0
1,788,734	+		AO356_07980	0.12	+0.5
1,788,735	-		AO356_07980	0.13	-1.0
1,788,735	-		AO356_07980	0.13	+1.6
1,788,735	-		AO356_07980	0.13	-0.3
1,788,735	-		AO356_07980	0.13	+0.1
1,788,735	-		AO356_07980	0.13	+0.4
1,788,836	+		AO356_07980	0.22	+0.8
1,789,058	+		AO356_07980	0.42	+0.3
1,789,058	+		AO356_07980	0.42	-0.9
1,789,058	+		AO356_07980	0.42	+0.9
1,789,058	+		AO356_07980	0.42	-0.9
1,789,058	+		AO356_07980	0.42	-0.8
1,789,058	+		AO356_07980	0.42	+0.2
1,789,059	-		AO356_07980	0.42	-0.4
1,789,059	-		AO356_07980	0.42	-0.5
1,789,059	-		AO356_07980	0.42	+0.1
1,789,202	+		AO356_07980	0.55	+0.4
1,789,202	+		AO356_07980	0.55	+0.6
1,789,203	-		AO356_07980	0.55	+1.1
1,789,203	-		AO356_07980	0.55	+0.4
1,789,203	-		AO356_07980	0.55	+1.0
1,789,203	-		AO356_07980	0.55	+0.6
1,789,440	-		AO356_07980	0.76	+0.5
1,789,440	-		AO356_07980	0.76	-0.2
1,789,450	+		AO356_07980	0.77	+1.2
1,789,521	-		AO356_07980	0.84	+0.8
1,789,521	-		AO356_07980	0.84	-0.2
1,789,521	-		AO356_07980	0.84	+0.6
1,789,521	-		AO356_07980	0.84	+0.6
1,789,521	-		AO356_07980	0.84	-0.3
1,789,726	-				+0.5
1,789,726	-				-0.6
1,789,732	+				-0.0
1,790,074	-		AO356_07985	0.40	+0.2
1,790,102	+		AO356_07985	0.43	-0.6
1,790,103	-		AO356_07985	0.43	-1.0
1,790,103	-		AO356_07985	0.43	-1.1
1,790,137	+		AO356_07985	0.47	-0.5
1,790,137	+		AO356_07985	0.47	+0.5
1,790,137	+		AO356_07985	0.47	-0.4
1,790,138	-		AO356_07985	0.47	-0.8
1,790,138	-		AO356_07985	0.47	+0.3
1,790,138	-		AO356_07985	0.47	+0.2
1,790,317	+		AO356_07985	0.66	-0.8
1,790,317	+		AO356_07985	0.66	-0.2
1,790,317	+		AO356_07985	0.66	+0.9
1,790,318	-		AO356_07985	0.66	-0.4
1,790,318	-		AO356_07985	0.66	-0.0
1,790,318	-		AO356_07985	0.66	+0.8
1,790,397	-		AO356_07985	0.75	-0.7
1,790,437	+		AO356_07985	0.79	+0.3
1,790,437	+		AO356_07985	0.79	+1.3
1,790,438	-		AO356_07985	0.79	+0.9
1,790,540	+				-0.7
1,790,540	+				-0.0
1,790,540	+				+0.2
1,790,541	-				+0.3
1,790,541	-				+0.9
1,790,541	-				+1.5
1,790,541	-				+0.7
1,790,541	-				+0.5
1,790,541	-				+3.9
1,790,584	+				-0.7
1,790,631	+				+0.6
1,790,632	-				+0.3
1,790,647	+				+0.2
1,790,647	+				-0.1
1,790,648	-				-0.0
1,790,648	-				+1.3
1,790,673	+				-0.6
1,790,674	-				+0.4
1,790,832	+		AO356_07990	0.30	+1.4
1,790,832	+		AO356_07990	0.30	-1.4
1,790,832	+		AO356_07990	0.30	-0.2
1,790,832	+		AO356_07990	0.30	+0.3
1,790,832	+		AO356_07990	0.30	-0.5
1,790,832	+		AO356_07990	0.30	-0.1
1,790,833	-		AO356_07990	0.30	-0.6
1,790,833	-		AO356_07990	0.30	+1.0
1,790,833	-		AO356_07990	0.30	-0.5
1,790,874	+		AO356_07990	0.39	+1.2
1,790,875	-		AO356_07990	0.40	+0.2
1,790,959	+		AO356_07990	0.59	+0.1
1,790,959	+		AO356_07990	0.59	+0.3
1,790,959	+		AO356_07990	0.59	+0.1
1,790,959	+		AO356_07990	0.59	+0.1
1,790,959	+		AO356_07990	0.59	-0.8
1,790,959	+		AO356_07990	0.59	+0.4
1,790,959	+		AO356_07990	0.59	+0.8
1,790,959	+		AO356_07990	0.59	-0.2
1,790,959	+		AO356_07990	0.59	+0.2
1,790,959	+		AO356_07990	0.59	-0.2
1,790,959	+		AO356_07990	0.59	-0.1
1,790,960	-		AO356_07990	0.59	-0.3
1,790,960	-		AO356_07990	0.59	-0.3
1,790,960	-		AO356_07990	0.59	-0.8
1,790,960	-		AO356_07990	0.59	+0.8
1,790,960	-		AO356_07990	0.59	+0.8
1,790,960	-		AO356_07990	0.59	-1.2
1,790,960	-		AO356_07990	0.59	+0.0
1,790,960	-		AO356_07990	0.59	+0.4
1,791,002	+		AO356_07990	0.69	-0.0
1,791,002	+		AO356_07990	0.69	+0.5
1,791,003	-		AO356_07990	0.69	+0.8
1,791,003	-		AO356_07990	0.69	-1.3
1,791,003	-		AO356_07990	0.69	+0.8
1,791,003	-		AO356_07990	0.69	+0.5
1,791,003	-		AO356_07990	0.69	-0.3
1,791,003	-		AO356_07990	0.69	-0.0
1,791,077	-		AO356_07990	0.87	+0.5
1,791,133	+				+1.6
1,791,133	+				-0.5
1,791,133	+				-0.4
1,791,133	+				-0.9
1,791,133	+				-1.2
1,791,133	+				-0.2
1,791,133	+				-0.1
1,791,133	+				+0.2
1,791,133	+				+0.5
1,791,133	+				-0.5
1,791,134	-				+0.3
1,791,134	-				+0.2
1,791,134	-				+0.9
1,791,134	-				+1.6
1,791,134	-				-0.2
1,791,134	-				+0.2
1,791,134	-				+0.2
1,791,134	-				+0.9
1,791,134	-				-0.1
1,791,134	-				+0.4
1,791,134	-				+0.4
1,791,134	-				-0.4
1,791,134	-				+0.3
1,791,150	-				-0.9
1,791,150	-				+0.1
1,791,169	+				+0.3
1,791,170	-				-0.5
1,791,181	+				-2.2
1,791,181	+				-0.6
1,791,182	-				-0.0
1,791,230	+				-0.5
1,791,271	+		AO356_07995	0.16	-0.1
1,791,271	+		AO356_07995	0.16	+0.2
1,791,272	-		AO356_07995	0.17	+0.1
1,791,355	+		AO356_07995	0.40	-0.8
1,791,355	+		AO356_07995	0.40	+1.0
1,791,355	+		AO356_07995	0.40	+0.8
1,791,355	+		AO356_07995	0.40	+1.0
1,791,355	+		AO356_07995	0.40	+1.3
1,791,355	+		AO356_07995	0.40	+0.4
1,791,356	-		AO356_07995	0.40	+0.7
1,791,356	-		AO356_07995	0.40	-0.2
1,791,356	-		AO356_07995	0.40	+0.5
1,791,356	-		AO356_07995	0.40	+0.5
1,791,356	-		AO356_07995	0.40	+0.8
1,791,357	+		AO356_07995	0.41	+0.2
1,791,358	-		AO356_07995	0.41	-0.5
1,791,358	-		AO356_07995	0.41	+0.4
1,791,554	+				-0.5