Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR42_RS24190 and RR42_RS24195 are separated by 806 nucleotides
RR42_RS24190: RR42_RS24190 - LysR family transcriptional regulator, at 752,641 to 752,946
_RS24190
RR42_RS24195: RR42_RS24195 - short-chain dehydrogenase, at 753,753 to 754,589
_RS24195
Position (kb) 753
754
755 Strain fitness (log2 ratio) -1
0
1 at 752.820 kb on - strand, within RR42_RS24190 at 752.820 kb on - strand, within RR42_RS24190 at 753.219 kb on + strand at 753.267 kb on + strand at 753.450 kb on - strand at 753.467 kb on + strand at 753.468 kb on - strand at 753.468 kb on - strand at 753.468 kb on - strand at 753.534 kb on + strand at 753.559 kb on - strand at 753.597 kb on + strand at 753.598 kb on - strand at 753.598 kb on - strand at 753.599 kb on + strand at 753.599 kb on + strand at 753.600 kb on - strand at 753.600 kb on - strand at 753.600 kb on - strand at 753.600 kb on - strand at 753.640 kb on + strand at 753.641 kb on - strand at 753.701 kb on - strand at 753.701 kb on - strand at 753.855 kb on + strand, within RR42_RS24195 at 753.855 kb on + strand, within RR42_RS24195 at 753.855 kb on + strand, within RR42_RS24195 at 753.855 kb on + strand, within RR42_RS24195 at 753.855 kb on + strand, within RR42_RS24195 at 753.856 kb on - strand, within RR42_RS24195 at 753.889 kb on - strand, within RR42_RS24195 at 753.952 kb on + strand, within RR42_RS24195 at 753.971 kb on + strand, within RR42_RS24195 at 753.971 kb on + strand, within RR42_RS24195 at 753.971 kb on + strand, within RR42_RS24195 at 753.971 kb on + strand, within RR42_RS24195 at 753.971 kb on + strand, within RR42_RS24195 at 753.972 kb on - strand, within RR42_RS24195 at 753.972 kb on - strand, within RR42_RS24195 at 753.985 kb on + strand, within RR42_RS24195 at 753.986 kb on - strand, within RR42_RS24195 at 754.139 kb on + strand, within RR42_RS24195 at 754.139 kb on + strand, within RR42_RS24195 at 754.139 kb on + strand, within RR42_RS24195 at 754.144 kb on + strand, within RR42_RS24195 at 754.144 kb on + strand, within RR42_RS24195 at 754.144 kb on + strand, within RR42_RS24195 at 754.145 kb on - strand, within RR42_RS24195 at 754.145 kb on - strand, within RR42_RS24195 at 754.191 kb on - strand, within RR42_RS24195 at 754.231 kb on - strand, within RR42_RS24195 at 754.317 kb on - strand, within RR42_RS24195 at 754.330 kb on + strand, within RR42_RS24195 at 754.350 kb on + strand, within RR42_RS24195 at 754.466 kb on + strand, within RR42_RS24195 at 754.467 kb on - strand, within RR42_RS24195 at 754.565 kb on + strand at 754.583 kb on + strand at 754.594 kb on - strand at 754.737 kb on + strand at 754.737 kb on + strand at 754.738 kb on - strand at 754.777 kb on - strand at 754.792 kb on + strand at 754.792 kb on + strand at 754.801 kb on + strand at 754.801 kb on + strand at 754.801 kb on + strand at 754.801 kb on + strand at 754.802 kb on - strand at 754.816 kb on + strand at 754.961 kb on + strand at 754.961 kb on + strand at 754.961 kb on + strand at 754.962 kb on - strand at 755.007 kb on - strand at 755.007 kb on - strand at 755.024 kb on + strand at 755.024 kb on + strand at 755.025 kb on - strand at 755.025 kb on - strand at 755.030 kb on + strand at 755.031 kb on - strand at 755.031 kb on - strand at 755.046 kb on - strand at 755.046 kb on - strand at 755.046 kb on - strand at 755.049 kb on + strand at 755.049 kb on + strand at 755.049 kb on + strand at 755.049 kb on + strand at 755.049 kb on + strand at 755.050 kb on - strand at 755.050 kb on - strand at 755.050 kb on - strand at 755.050 kb on - strand at 755.055 kb on + strand at 755.055 kb on + strand at 755.056 kb on - strand at 755.093 kb on - strand at 755.185 kb on + strand at 755.185 kb on + strand at 755.186 kb on - strand at 755.186 kb on - strand at 755.215 kb on + strand at 755.215 kb on + strand at 755.215 kb on + strand at 755.235 kb on + strand at 755.245 kb on + strand at 755.246 kb on - strand at 755.246 kb on - strand at 755.268 kb on + strand at 755.296 kb on - strand at 755.296 kb on - strand at 755.418 kb on + strand at 755.418 kb on + strand at 755.419 kb on - strand at 755.429 kb on + strand at 755.429 kb on + strand at 755.534 kb on + strand at 755.534 kb on + strand at 755.534 kb on + strand at 755.535 kb on - strand at 755.535 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 752,820 - RR42_RS24190 0.58 +0.3 752,820 - RR42_RS24190 0.58 +0.3 753,219 + -0.1 753,267 + -1.0 753,450 - -0.2 753,467 + +0.6 753,468 - -0.7 753,468 - +0.2 753,468 - +0.3 753,534 + +0.9 753,559 - -1.3 753,597 + -0.6 753,598 - -0.3 753,598 - +1.0 753,599 + -0.5 753,599 + +0.1 753,600 - -0.6 753,600 - -1.0 753,600 - -0.2 753,600 - +0.0 753,640 + +0.8 753,641 - -0.2 753,701 - -1.0 753,701 - -0.0 753,855 + RR42_RS24195 0.12 +1.3 753,855 + RR42_RS24195 0.12 -0.1 753,855 + RR42_RS24195 0.12 +0.7 753,855 + RR42_RS24195 0.12 +0.4 753,855 + RR42_RS24195 0.12 -0.0 753,856 - RR42_RS24195 0.12 +0.3 753,889 - RR42_RS24195 0.16 -0.4 753,952 + RR42_RS24195 0.24 +0.3 753,971 + RR42_RS24195 0.26 -0.1 753,971 + RR42_RS24195 0.26 +0.6 753,971 + RR42_RS24195 0.26 -1.0 753,971 + RR42_RS24195 0.26 +0.1 753,971 + RR42_RS24195 0.26 -0.3 753,972 - RR42_RS24195 0.26 -1.0 753,972 - RR42_RS24195 0.26 -0.0 753,985 + RR42_RS24195 0.28 +1.0 753,986 - RR42_RS24195 0.28 +0.3 754,139 + RR42_RS24195 0.46 +0.4 754,139 + RR42_RS24195 0.46 -0.2 754,139 + RR42_RS24195 0.46 -0.4 754,144 + RR42_RS24195 0.47 -0.2 754,144 + RR42_RS24195 0.47 -0.1 754,144 + RR42_RS24195 0.47 -0.6 754,145 - RR42_RS24195 0.47 -0.1 754,145 - RR42_RS24195 0.47 -0.0 754,191 - RR42_RS24195 0.52 +0.2 754,231 - RR42_RS24195 0.57 +0.4 754,317 - RR42_RS24195 0.67 -0.1 754,330 + RR42_RS24195 0.69 -0.5 754,350 + RR42_RS24195 0.71 +0.0 754,466 + RR42_RS24195 0.85 -0.6 754,467 - RR42_RS24195 0.85 +0.9 754,565 + -0.2 754,583 + +0.4 754,594 - +0.3 754,737 + -0.0 754,737 + -1.1 754,738 - +0.0 754,777 - -0.9 754,792 + -0.0 754,792 + +0.5 754,801 + -0.1 754,801 + +0.3 754,801 + +0.2 754,801 + -0.3 754,802 - +0.5 754,816 + -0.3 754,961 + +0.5 754,961 + +0.9 754,961 + -0.5 754,962 - -0.1 755,007 - +0.0 755,007 - -1.0 755,024 + -0.6 755,024 + -0.7 755,025 - -0.4 755,025 - +0.1 755,030 + +1.0 755,031 - +0.0 755,031 - +0.2 755,046 - +1.0 755,046 - -0.9 755,046 - +0.3 755,049 + +1.2 755,049 + -0.6 755,049 + -0.0 755,049 + -1.3 755,049 + -0.2 755,050 - -0.2 755,050 - +0.1 755,050 - -0.2 755,050 - -0.6 755,055 + +0.5 755,055 + +0.1 755,056 - -0.3 755,093 - -1.2 755,185 + +0.2 755,185 + +0.1 755,186 - -0.1 755,186 - -0.7 755,215 + +0.8 755,215 + -0.2 755,215 + +0.0 755,235 + +0.6 755,245 + -0.4 755,246 - -0.3 755,246 - +0.4 755,268 + -1.5 755,296 - +0.3 755,296 - -0.2 755,418 + -0.0 755,418 + +0.1 755,419 - +0.7 755,429 + +1.2 755,429 + +0.2 755,534 + -0.1 755,534 + +0.4 755,534 + +0.2 755,535 - +1.0 755,535 - -1.1
Or see this region's nucleotide sequence