Strain Fitness in Pantoea sp. MT58 around IAI47_18010

Experiment: Defined media control, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Defined media control, aerobic
3,828,281	-		IAI47_18005	0.26	+0.9
3,828,281	-		IAI47_18005	0.26	-2.8
3,828,300	+		IAI47_18005	0.27	-0.8
3,828,300	+		IAI47_18005	0.27	+1.3
3,828,300	+		IAI47_18005	0.27	+0.5
3,828,300	+		IAI47_18005	0.27	+0.4
3,828,300	+		IAI47_18005	0.27	+0.1
3,828,301	-		IAI47_18005	0.28	-0.6
3,828,301	-		IAI47_18005	0.28	+0.1
3,828,301	-		IAI47_18005	0.28	+2.0
3,828,301	-		IAI47_18005	0.28	+0.8
3,828,334	+		IAI47_18005	0.30	+0.3
3,828,335	-		IAI47_18005	0.30	+0.9
3,828,335	-		IAI47_18005	0.30	+2.6
3,828,335	-		IAI47_18005	0.30	+0.6
3,828,403	-		IAI47_18005	0.35	+0.3
3,828,403	-		IAI47_18005	0.35	+0.1
3,828,403	-		IAI47_18005	0.35	+1.4
3,828,403	-		IAI47_18005	0.35	+0.4
3,828,403	-		IAI47_18005	0.35	+1.1
3,828,403	-		IAI47_18005	0.35	+0.2
3,828,411	+		IAI47_18005	0.36	+0.9
3,828,411	+		IAI47_18005	0.36	+0.7
3,828,411	+		IAI47_18005	0.36	-0.1
3,828,411	+		IAI47_18005	0.36	-0.4
3,828,411	+		IAI47_18005	0.36	+0.1
3,828,411	+		IAI47_18005	0.36	+1.8
3,828,412	-		IAI47_18005	0.36	-1.8
3,828,412	-		IAI47_18005	0.36	+1.3
3,828,412	-		IAI47_18005	0.36	+0.0
3,828,412	-		IAI47_18005	0.36	+0.9
3,828,412	-		IAI47_18005	0.36	-0.8
3,828,412	-		IAI47_18005	0.36	-0.6
3,828,412	-		IAI47_18005	0.36	-2.4
3,828,412	-		IAI47_18005	0.36	+0.5
3,828,504	+		IAI47_18005	0.43	+1.1
3,828,504	+		IAI47_18005	0.43	+0.4
3,828,505	-		IAI47_18005	0.43	-1.9
3,828,505	-		IAI47_18005	0.43	-0.3
3,828,505	-		IAI47_18005	0.43	-1.3
3,828,505	-		IAI47_18005	0.43	-0.2
3,828,505	-		IAI47_18005	0.43	+0.7
3,828,523	+		IAI47_18005	0.45	-0.2
3,828,523	+		IAI47_18005	0.45	-0.9
3,828,524	-		IAI47_18005	0.45	-0.2
3,828,741	+		IAI47_18005	0.61	+1.9
3,828,741	+		IAI47_18005	0.61	-0.5
3,828,742	-		IAI47_18005	0.61	-1.2
3,828,742	-		IAI47_18005	0.61	-2.7
3,828,742	-		IAI47_18005	0.61	+0.6
3,828,742	-		IAI47_18005	0.61	+2.7
3,828,805	+		IAI47_18005	0.66	-2.1
3,828,805	+		IAI47_18005	0.66	+0.5
3,828,806	-		IAI47_18005	0.66	-0.3
3,828,930	+		IAI47_18005	0.76	-1.2
3,828,930	+		IAI47_18005	0.76	+1.1
3,828,930	+		IAI47_18005	0.76	-0.2
3,828,930	+		IAI47_18005	0.76	-1.3
3,828,931	-		IAI47_18005	0.76	-0.2
3,828,931	-		IAI47_18005	0.76	+0.5
3,828,931	-		IAI47_18005	0.76	+0.3
3,828,931	-		IAI47_18005	0.76	+1.1
3,828,931	-		IAI47_18005	0.76	-0.8
3,828,981	+		IAI47_18005	0.80	+0.1
3,828,981	+		IAI47_18005	0.80	+0.3
3,828,981	+		IAI47_18005	0.80	-0.0
3,828,981	+		IAI47_18005	0.80	+1.1
3,828,981	+		IAI47_18005	0.80	-2.3
3,828,982	-		IAI47_18005	0.80	-0.8
3,828,982	-		IAI47_18005	0.80	+0.9
3,828,982	-		IAI47_18005	0.80	+0.2
3,828,982	-		IAI47_18005	0.80	+0.2
3,828,982	-		IAI47_18005	0.80	-0.2
3,828,982	-		IAI47_18005	0.80	-1.2
3,828,982	-		IAI47_18005	0.80	+0.1
3,829,053	+		IAI47_18005	0.85	-0.9
3,829,053	+		IAI47_18005	0.85	+0.8
3,829,053	+		IAI47_18005	0.85	+0.8
3,829,054	-		IAI47_18005	0.85	+2.5
3,829,054	-		IAI47_18005	0.85	+0.1
3,829,054	-		IAI47_18005	0.85	+0.3
3,829,054	-		IAI47_18005	0.85	+1.0
3,829,054	-		IAI47_18005	0.85	+0.2
3,829,088	+		IAI47_18005	0.88	+0.6
3,829,117	+				+0.5
3,829,117	+				+0.6
3,829,118	-				+0.9
3,829,118	-				-1.4
3,829,118	-				-0.4
3,829,118	-				-0.1
3,829,147	+				-0.2
3,829,148	-				+1.1
3,829,167	+				-1.1
3,829,167	+				+1.0
3,829,168	-				-0.0
3,829,168	-				+2.1
3,829,168	-				-0.8
3,829,168	-				-0.1
3,829,234	+				-0.1
3,829,234	+				+1.6
3,829,234	+				+0.5
3,829,235	-				+0.5
3,829,235	-				+1.1
3,829,235	-				-0.5
3,829,235	-				-1.7
3,829,249	+				+0.8
3,829,249	+				+0.9
3,829,249	+				-0.0
3,829,249	+				+1.4
3,829,250	-				+0.5
3,829,290	+				-0.3
3,829,353	-				+0.6
3,829,580	+		IAI47_18010	0.20	-1.6
3,829,581	-		IAI47_18010	0.20	-0.1
3,829,581	-		IAI47_18010	0.20	+0.0
3,829,581	-		IAI47_18010	0.20	-1.0
3,829,581	-		IAI47_18010	0.20	+0.9
3,829,581	-		IAI47_18010	0.20	+1.1
3,829,581	-		IAI47_18010	0.20	-0.6
3,829,648	+		IAI47_18010	0.24	-0.9
3,829,648	+		IAI47_18010	0.24	-1.2
3,829,649	-		IAI47_18010	0.24	-0.3
3,829,649	-		IAI47_18010	0.24	+0.3
3,829,649	-		IAI47_18010	0.24	-0.4
3,829,649	-		IAI47_18010	0.24	-0.5
3,829,649	-		IAI47_18010	0.24	+2.4
3,829,649	-		IAI47_18010	0.24	+0.5
3,829,686	+		IAI47_18010	0.27	-0.3
3,829,687	-		IAI47_18010	0.27	-0.6
3,829,738	-		IAI47_18010	0.30	-0.3
3,829,806	+		IAI47_18010	0.34	+1.0
3,829,806	+		IAI47_18010	0.34	+1.0
3,829,806	+		IAI47_18010	0.34	-0.2
3,829,807	-		IAI47_18010	0.34	-0.1
3,829,807	-		IAI47_18010	0.34	+0.4
3,829,828	+		IAI47_18010	0.35	+0.5
3,829,839	+		IAI47_18010	0.36	+0.7
3,829,839	+		IAI47_18010	0.36	-0.0
3,829,839	+		IAI47_18010	0.36	+1.0
3,829,839	+		IAI47_18010	0.36	-0.7
3,829,839	+		IAI47_18010	0.36	-0.9
3,829,839	+		IAI47_18010	0.36	-0.3
3,829,840	-		IAI47_18010	0.36	+1.6
3,829,840	-		IAI47_18010	0.36	-0.3
3,829,840	-		IAI47_18010	0.36	+1.2
3,829,840	-		IAI47_18010	0.36	+0.7
3,829,840	-		IAI47_18010	0.36	+1.4
3,829,840	-		IAI47_18010	0.36	+0.9
3,829,840	-		IAI47_18010	0.36	-0.4
3,829,840	-		IAI47_18010	0.36	+1.4
3,829,854	+		IAI47_18010	0.37	-0.3
3,829,855	-		IAI47_18010	0.37	+0.9
3,829,931	+		IAI47_18010	0.42	-1.2
3,829,931	+		IAI47_18010	0.42	-0.1
3,829,931	+		IAI47_18010	0.42	+1.3
3,829,932	-		IAI47_18010	0.42	-1.3
3,829,932	-		IAI47_18010	0.42	-1.8
3,829,932	-		IAI47_18010	0.42	-0.0
3,829,956	+		IAI47_18010	0.43	-1.0
3,829,956	+		IAI47_18010	0.43	+0.0
3,829,956	+		IAI47_18010	0.43	+1.3
3,829,956	+		IAI47_18010	0.43	-2.0
3,829,956	+		IAI47_18010	0.43	+0.3
3,829,956	+		IAI47_18010	0.43	-0.1
3,829,956	+		IAI47_18010	0.43	-0.6
3,829,956	+		IAI47_18010	0.43	+0.2
3,829,957	-		IAI47_18010	0.44	+0.7
3,829,957	-		IAI47_18010	0.44	+0.7
3,829,957	-		IAI47_18010	0.44	+0.6
3,829,957	-		IAI47_18010	0.44	-0.0
3,829,957	-		IAI47_18010	0.44	+0.3
3,829,957	-		IAI47_18010	0.44	-0.0
3,829,957	-		IAI47_18010	0.44	+0.2
3,830,015	+		IAI47_18010	0.47	-2.1
3,830,015	+		IAI47_18010	0.47	-0.5
3,830,015	+		IAI47_18010	0.47	+0.7
3,830,015	+		IAI47_18010	0.47	+0.6
3,830,016	-		IAI47_18010	0.47	-1.2
3,830,027	+		IAI47_18010	0.48	-0.5
3,830,028	-		IAI47_18010	0.48	+0.1
3,830,139	+		IAI47_18010	0.55	-0.0
3,830,139	+		IAI47_18010	0.55	-0.2
3,830,140	-		IAI47_18010	0.55	-1.2
3,830,228	+		IAI47_18010	0.60	+0.1
3,830,228	+		IAI47_18010	0.60	+0.9
3,830,228	+		IAI47_18010	0.60	+0.7
3,830,228	+		IAI47_18010	0.60	+1.6
3,830,228	+		IAI47_18010	0.60	-0.4
3,830,228	+		IAI47_18010	0.60	-1.5
3,830,228	+		IAI47_18010	0.60	-1.4
3,830,228	+		IAI47_18010	0.60	-1.0
3,830,228	+		IAI47_18010	0.60	-0.4
3,830,229	-		IAI47_18010	0.61	-0.0
3,830,229	-		IAI47_18010	0.61	-0.1
3,830,229	-		IAI47_18010	0.61	-2.2
3,830,229	-		IAI47_18010	0.61	+1.7
3,830,229	-		IAI47_18010	0.61	-3.7
3,830,229	-		IAI47_18010	0.61	+2.1
3,830,234	+		IAI47_18010	0.61	+0.9
3,830,234	+		IAI47_18010	0.61	+2.9
3,830,234	+		IAI47_18010	0.61	+0.2
3,830,235	-		IAI47_18010	0.61	+0.5
3,830,235	-		IAI47_18010	0.61	+0.8
3,830,235	-		IAI47_18010	0.61	+0.7
3,830,235	-		IAI47_18010	0.61	-0.6
3,830,235	-		IAI47_18010	0.61	+1.1
3,830,235	-		IAI47_18010	0.61	-0.2
3,830,235	-		IAI47_18010	0.61	+1.1
3,830,235	-		IAI47_18010	0.61	-0.3
3,830,257	+		IAI47_18010	0.62	+1.7
3,830,282	+		IAI47_18010	0.64	-0.2
3,830,282	+		IAI47_18010	0.64	+1.2
3,830,403	-		IAI47_18010	0.71	+1.1
3,830,426	+		IAI47_18010	0.73	-0.1
3,830,426	+		IAI47_18010	0.73	-0.9
3,830,426	+		IAI47_18010	0.73	-0.3
3,830,426	+		IAI47_18010	0.73	+1.7
3,830,427	-		IAI47_18010	0.73	+1.9
3,830,427	-		IAI47_18010	0.73	+1.6
3,830,427	-		IAI47_18010	0.73	+1.2
3,830,530	+		IAI47_18010	0.79	-2.4
3,830,531	-		IAI47_18010	0.79	+1.1
3,830,531	-		IAI47_18010	0.79	-1.0
3,830,550	+		IAI47_18010	0.81	+0.1
3,830,551	-		IAI47_18010	0.81	+1.3
3,830,551	-		IAI47_18010	0.81	+1.0
3,830,602	+		IAI47_18010	0.84	+0.9
3,830,602	+		IAI47_18010	0.84	-1.2
3,830,602	+		IAI47_18010	0.84	+0.1
3,830,602	+		IAI47_18010	0.84	-1.0
3,830,602	+		IAI47_18010	0.84	-1.8
3,830,603	-		IAI47_18010	0.84	-0.1
3,830,603	-		IAI47_18010	0.84	+0.5
3,830,625	+		IAI47_18010	0.85	+2.3
3,830,626	-		IAI47_18010	0.85	+0.9
3,830,644	+		IAI47_18010	0.86	+1.5
3,830,644	+		IAI47_18010	0.86	-0.4
3,830,645	-		IAI47_18010	0.87	-0.6
3,830,645	-		IAI47_18010	0.87	+0.2
3,830,679	-		IAI47_18010	0.89	-1.0
3,830,679	-		IAI47_18010	0.89	+0.1
3,830,690	+		IAI47_18010	0.89	+0.5
3,830,690	+		IAI47_18010	0.89	+0.4
3,830,690	+		IAI47_18010	0.89	+0.7
3,830,691	-		IAI47_18010	0.89	-3.0
3,830,812	-				+0.1
3,830,812	-				-0.8
3,830,875	+				+0.7
3,830,875	+				-1.2
3,830,876	-				-0.6
3,830,940	+				-0.0
3,830,940	+				+0.1
3,830,940	+				-0.2
3,830,940	+				-0.8
3,830,941	-				+0.4
3,830,941	-				+1.6
3,830,941	-				+0.9
3,830,969	-				-0.1
3,830,982	+				+0.3
3,830,983	-				+0.9
3,830,996	+				-0.5
3,831,009	+				-1.5
3,831,027	+				-0.5
3,831,032	-				+1.4
3,831,034	+				-0.4
3,831,035	-				+0.5
3,831,123	+				-0.3
3,831,177	+				-3.1
3,831,177	+				-3.0
3,831,177	+				-1.6
3,831,178	-				-0.5
3,831,178	-				-2.0
3,831,180	+				-0.3
3,831,180	+				-2.4
3,831,180	+				-1.8
3,831,181	-				-2.2
3,831,208	+				-2.4
3,831,218	-		IAI47_18015	0.10	-1.0
3,831,218	-		IAI47_18015	0.10	-1.0
3,831,264	+		IAI47_18015	0.15	-3.5
3,831,264	+		IAI47_18015	0.15	-2.5
3,831,265	-		IAI47_18015	0.15	+0.0
3,831,265	-		IAI47_18015	0.15	-2.8
3,831,265	-		IAI47_18015	0.15	-2.1
3,831,265	-		IAI47_18015	0.15	-0.9
3,831,268	+		IAI47_18015	0.16	-2.4
3,831,268	+		IAI47_18015	0.16	+0.1
3,831,268	+		IAI47_18015	0.16	-3.3
3,831,268	+		IAI47_18015	0.16	-1.5
3,831,269	-		IAI47_18015	0.16	-1.8
3,831,269	-		IAI47_18015	0.16	-4.3
3,831,269	-		IAI47_18015	0.16	-1.6
3,831,269	-		IAI47_18015	0.16	-1.6
3,831,269	-		IAI47_18015	0.16	-2.0
3,831,269	-		IAI47_18015	0.16	-2.6
3,831,270	+		IAI47_18015	0.16	-3.3
3,831,270	+		IAI47_18015	0.16	-0.0
3,831,270	+		IAI47_18015	0.16	-2.1
3,831,270	+		IAI47_18015	0.16	-1.1
3,831,270	+		IAI47_18015	0.16	+0.6
3,831,271	-		IAI47_18015	0.16	-0.3
3,831,271	-		IAI47_18015	0.16	-2.2
3,831,271	-		IAI47_18015	0.16	-3.1
3,831,300	+		IAI47_18015	0.19	-2.6
3,831,300	+		IAI47_18015	0.19	-2.0
3,831,312	+		IAI47_18015	0.20	-0.2
3,831,312	+		IAI47_18015	0.20	-1.3
3,831,313	-		IAI47_18015	0.21	-2.9
3,831,313	-		IAI47_18015	0.21	-2.1
3,831,313	-		IAI47_18015	0.21	-1.2
3,831,313	-		IAI47_18015	0.21	-3.1
3,831,313	-		IAI47_18015	0.21	-3.5
3,831,313	-		IAI47_18015	0.21	-0.9
3,831,340	-		IAI47_18015	0.23	-3.5
3,831,340	-		IAI47_18015	0.23	-1.9
3,831,340	-		IAI47_18015	0.23	-4.2
3,831,355	+		IAI47_18015	0.25	-2.5
3,831,362	+		IAI47_18015	0.26	-2.3
3,831,362	+		IAI47_18015	0.26	-0.9
3,831,362	+		IAI47_18015	0.26	-0.9
3,831,362	+		IAI47_18015	0.26	-2.1
3,831,362	+		IAI47_18015	0.26	-2.5
3,831,363	-		IAI47_18015	0.26	-2.8
3,831,363	-		IAI47_18015	0.26	-2.2
3,831,363	-		IAI47_18015	0.26	-0.9
3,831,379	+		IAI47_18015	0.28	-1.8
3,831,393	+		IAI47_18015	0.29	-2.9
3,831,393	+		IAI47_18015	0.29	-2.4
3,831,394	-		IAI47_18015	0.29	-2.7
3,831,438	+		IAI47_18015	0.34	-0.2
3,831,438	+		IAI47_18015	0.34	-1.0
3,831,439	-		IAI47_18015	0.34	-0.7
3,831,458	-		IAI47_18015	0.36	-1.6
3,831,471	+		IAI47_18015	0.38	-3.0
3,831,471	+		IAI47_18015	0.38	-0.3
3,831,471	+		IAI47_18015	0.38	-2.9
3,831,472	-		IAI47_18015	0.38	-0.3
3,831,496	+		IAI47_18015	0.40	-3.0
3,831,497	-		IAI47_18015	0.40	-3.1
3,831,497	-		IAI47_18015	0.40	-2.5
3,831,536	+		IAI47_18015	0.45	-0.9
3,831,536	+		IAI47_18015	0.45	-2.1
3,831,536	+		IAI47_18015	0.45	-2.5
3,831,537	-		IAI47_18015	0.45	-2.1
3,831,537	-		IAI47_18015	0.45	-2.2
3,831,537	-		IAI47_18015	0.45	-2.6
3,831,537	-		IAI47_18015	0.45	-2.6
3,831,537	-		IAI47_18015	0.45	-1.0
3,831,549	+		IAI47_18015	0.46	-3.5
3,831,549	+		IAI47_18015	0.46	-2.2
3,831,549	+		IAI47_18015	0.46	-3.0
3,831,550	-		IAI47_18015	0.46	-1.7
3,831,568	+		IAI47_18015	0.48	-1.4
3,831,568	+		IAI47_18015	0.48	-2.6
3,831,568	+		IAI47_18015	0.48	-0.6
3,831,568	+		IAI47_18015	0.48	-2.9
3,831,569	-		IAI47_18015	0.48	-0.8
3,831,569	-		IAI47_18015	0.48	-3.1
3,831,569	-		IAI47_18015	0.48	-1.7
3,831,569	-		IAI47_18015	0.48	-2.1
3,831,594	+		IAI47_18015	0.51	-0.6
3,831,601	+		IAI47_18015	0.52	-3.1
3,831,601	+		IAI47_18015	0.52	-1.6
3,831,604	+		IAI47_18015	0.52	-0.0
3,831,693	+		IAI47_18015	0.61	-1.7
3,831,706	+		IAI47_18015	0.63	-2.7
3,831,744	-		IAI47_18015	0.67	-2.1
3,831,744	-		IAI47_18015	0.67	-1.2
3,831,744	-		IAI47_18015	0.67	-0.3
3,831,753	+		IAI47_18015	0.68	-1.9
3,831,753	+		IAI47_18015	0.68	-3.8
3,831,753	+		IAI47_18015	0.68	-2.9
3,831,753	+		IAI47_18015	0.68	-2.7
3,831,753	+		IAI47_18015	0.68	+3.1
3,831,753	+		IAI47_18015	0.68	-0.0
3,831,753	+		IAI47_18015	0.68	-1.9
3,831,753	+		IAI47_18015	0.68	-3.2
3,831,754	-		IAI47_18015	0.68	-0.9
3,831,769	+		IAI47_18015	0.70	-2.9
3,831,769	+		IAI47_18015	0.70	-1.3
3,831,770	-		IAI47_18015	0.70	-3.6
3,831,770	-		IAI47_18015	0.70	-0.9
3,831,786	+		IAI47_18015	0.71	-2.6
3,831,786	+		IAI47_18015	0.71	-1.8
3,831,787	-		IAI47_18015	0.72	+0.3
3,831,787	-		IAI47_18015	0.72	-2.5
3,831,814	+		IAI47_18015	0.74	-3.0
3,831,815	-		IAI47_18015	0.75	-0.7
3,831,815	-		IAI47_18015	0.75	-1.8
3,831,853	+		IAI47_18015	0.79	-3.3
3,831,853	+		IAI47_18015	0.79	-4.1