Experiment: Defined media control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI47_06255 and IAI47_06260 are separated by 94 nucleotides IAI47_06260 and IAI47_06265 overlap by 11 nucleotides
IAI47_06255: IAI47_06255 - acetyl-CoA carboxylase, carboxyltransferase subunit beta, at 1,271,943 to 1,272,857
_06255
IAI47_06260: IAI47_06260 - bifunctional tetrahydrofolate synthase/dihydrofolate synthase, at 1,272,952 to 1,274,220
_06260
IAI47_06265: IAI47_06265 - cell division protein DedD, at 1,274,210 to 1,274,992
_06265
Position (kb)
1272
1273
1274
1275 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1272.865 kb on + strand at 1272.865 kb on + strand at 1272.865 kb on + strand at 1272.891 kb on + strand at 1272.891 kb on + strand at 1272.891 kb on + strand at 1272.891 kb on + strand at 1272.904 kb on + strand at 1272.904 kb on + strand at 1272.906 kb on + strand at 1272.929 kb on + strand at 1272.929 kb on + strand at 1272.929 kb on + strand at 1272.931 kb on + strand at 1272.931 kb on + strand at 1272.931 kb on + strand at 1272.931 kb on + strand at 1272.931 kb on + strand at 1272.931 kb on + strand at 1272.931 kb on + strand at 1272.931 kb on + strand at 1272.935 kb on + strand at 1272.935 kb on + strand at 1272.935 kb on + strand at 1272.951 kb on + strand at 1272.951 kb on + strand at 1272.951 kb on + strand at 1274.218 kb on + strand at 1274.218 kb on + strand at 1274.218 kb on + strand at 1274.235 kb on + strand at 1274.248 kb on + strand at 1274.248 kb on + strand at 1274.309 kb on + strand, within IAI47_06265 at 1274.309 kb on + strand, within IAI47_06265 at 1274.309 kb on + strand, within IAI47_06265 at 1274.443 kb on + strand, within IAI47_06265 at 1274.443 kb on + strand, within IAI47_06265 at 1274.444 kb on - strand, within IAI47_06265 at 1274.449 kb on + strand, within IAI47_06265 at 1274.449 kb on + strand, within IAI47_06265 at 1274.450 kb on - strand, within IAI47_06265 at 1274.450 kb on - strand, within IAI47_06265 at 1274.450 kb on - strand, within IAI47_06265 at 1274.452 kb on + strand, within IAI47_06265 at 1274.452 kb on + strand, within IAI47_06265 at 1274.452 kb on + strand, within IAI47_06265 at 1274.452 kb on + strand, within IAI47_06265 at 1274.453 kb on - strand, within IAI47_06265 at 1274.503 kb on + strand, within IAI47_06265 at 1274.504 kb on - strand, within IAI47_06265 at 1274.596 kb on + strand, within IAI47_06265 at 1274.597 kb on - strand, within IAI47_06265 at 1274.597 kb on - strand, within IAI47_06265 at 1274.614 kb on + strand, within IAI47_06265 at 1274.614 kb on + strand, within IAI47_06265 at 1274.615 kb on - strand, within IAI47_06265 at 1274.645 kb on - strand, within IAI47_06265 at 1274.645 kb on - strand, within IAI47_06265 at 1274.645 kb on - strand, within IAI47_06265 at 1274.645 kb on - strand, within IAI47_06265 at 1274.645 kb on - strand, within IAI47_06265 at 1274.759 kb on + strand, within IAI47_06265 at 1274.759 kb on + strand, within IAI47_06265 at 1274.759 kb on + strand, within IAI47_06265 at 1274.759 kb on + strand, within IAI47_06265 at 1274.759 kb on + strand, within IAI47_06265 at 1274.759 kb on + strand, within IAI47_06265 at 1274.759 kb on + strand, within IAI47_06265 at 1274.759 kb on + strand, within IAI47_06265 at 1274.760 kb on - strand, within IAI47_06265 at 1274.760 kb on - strand, within IAI47_06265 at 1274.760 kb on - strand, within IAI47_06265 at 1274.772 kb on + strand, within IAI47_06265 at 1274.772 kb on + strand, within IAI47_06265 at 1274.772 kb on + strand, within IAI47_06265 at 1274.773 kb on - strand, within IAI47_06265 at 1274.773 kb on - strand, within IAI47_06265 at 1274.773 kb on - strand, within IAI47_06265 at 1274.773 kb on - strand, within IAI47_06265 at 1274.773 kb on - strand, within IAI47_06265 at 1274.845 kb on + strand, within IAI47_06265 at 1274.845 kb on + strand, within IAI47_06265 at 1274.845 kb on + strand, within IAI47_06265 at 1274.846 kb on - strand, within IAI47_06265 at 1274.846 kb on - strand, within IAI47_06265 at 1274.879 kb on - strand, within IAI47_06265 at 1274.888 kb on + strand, within IAI47_06265 at 1274.888 kb on + strand, within IAI47_06265 at 1274.888 kb on + strand, within IAI47_06265 at 1274.888 kb on + strand, within IAI47_06265 at 1274.889 kb on - strand, within IAI47_06265 at 1274.978 kb on + strand at 1274.978 kb on + strand at 1274.979 kb on - strand at 1275.015 kb on - strand at 1275.015 kb on - strand at 1275.020 kb on + strand at 1275.046 kb on + strand at 1275.070 kb on - strand at 1275.080 kb on + strand at 1275.152 kb on + strand at 1275.153 kb on - strand at 1275.201 kb on + strand at 1275.201 kb on + strand at 1275.201 kb on + strand at 1275.202 kb on - strand at 1275.202 kb on - strand at 1275.202 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Defined media control, aerobic remove 1,272,865 + -2.2 1,272,865 + -1.5 1,272,865 + +0.7 1,272,891 + -0.2 1,272,891 + +0.3 1,272,891 + -1.6 1,272,891 + +0.5 1,272,904 + +0.5 1,272,904 + +0.9 1,272,906 + -1.3 1,272,929 + -0.9 1,272,929 + -0.6 1,272,929 + +1.5 1,272,931 + +0.1 1,272,931 + +0.0 1,272,931 + +0.4 1,272,931 + +1.0 1,272,931 + +0.7 1,272,931 + -1.1 1,272,931 + -1.0 1,272,931 + -0.2 1,272,935 + +0.3 1,272,935 + -0.5 1,272,935 + +1.8 1,272,951 + +0.8 1,272,951 + -0.8 1,272,951 + -2.1 1,274,218 + -0.0 1,274,218 + -0.2 1,274,218 + -1.0 1,274,235 + +1.6 1,274,248 + +1.7 1,274,248 + -1.0 1,274,309 + IAI47_06265 0.13 -0.1 1,274,309 + IAI47_06265 0.13 -0.9 1,274,309 + IAI47_06265 0.13 +0.9 1,274,443 + IAI47_06265 0.30 +0.9 1,274,443 + IAI47_06265 0.30 +0.2 1,274,444 - IAI47_06265 0.30 +0.4 1,274,449 + IAI47_06265 0.31 -0.8 1,274,449 + IAI47_06265 0.31 +1.3 1,274,450 - IAI47_06265 0.31 +0.2 1,274,450 - IAI47_06265 0.31 -0.3 1,274,450 - IAI47_06265 0.31 -0.3 1,274,452 + IAI47_06265 0.31 +0.6 1,274,452 + IAI47_06265 0.31 +2.2 1,274,452 + IAI47_06265 0.31 +0.3 1,274,452 + IAI47_06265 0.31 +1.2 1,274,453 - IAI47_06265 0.31 +1.5 1,274,503 + IAI47_06265 0.37 -0.4 1,274,504 - IAI47_06265 0.38 -1.0 1,274,596 + IAI47_06265 0.49 +0.3 1,274,597 - IAI47_06265 0.49 +0.2 1,274,597 - IAI47_06265 0.49 -1.0 1,274,614 + IAI47_06265 0.52 -0.8 1,274,614 + IAI47_06265 0.52 +0.6 1,274,615 - IAI47_06265 0.52 -1.8 1,274,645 - IAI47_06265 0.56 +0.4 1,274,645 - IAI47_06265 0.56 +0.3 1,274,645 - IAI47_06265 0.56 -1.4 1,274,645 - IAI47_06265 0.56 -1.3 1,274,645 - IAI47_06265 0.56 -1.2 1,274,759 + IAI47_06265 0.70 +0.0 1,274,759 + IAI47_06265 0.70 -2.8 1,274,759 + IAI47_06265 0.70 -2.9 1,274,759 + IAI47_06265 0.70 -2.2 1,274,759 + IAI47_06265 0.70 -0.4 1,274,759 + IAI47_06265 0.70 +0.6 1,274,759 + IAI47_06265 0.70 -0.2 1,274,759 + IAI47_06265 0.70 -0.3 1,274,760 - IAI47_06265 0.70 -1.5 1,274,760 - IAI47_06265 0.70 +1.2 1,274,760 - IAI47_06265 0.70 -0.3 1,274,772 + IAI47_06265 0.72 +0.1 1,274,772 + IAI47_06265 0.72 -1.6 1,274,772 + IAI47_06265 0.72 +0.6 1,274,773 - IAI47_06265 0.72 +0.0 1,274,773 - IAI47_06265 0.72 +0.8 1,274,773 - IAI47_06265 0.72 -0.2 1,274,773 - IAI47_06265 0.72 -2.0 1,274,773 - IAI47_06265 0.72 +0.4 1,274,845 + IAI47_06265 0.81 +0.4 1,274,845 + IAI47_06265 0.81 -0.2 1,274,845 + IAI47_06265 0.81 -0.1 1,274,846 - IAI47_06265 0.81 +1.8 1,274,846 - IAI47_06265 0.81 -0.1 1,274,879 - IAI47_06265 0.85 -1.4 1,274,888 + IAI47_06265 0.87 +2.0 1,274,888 + IAI47_06265 0.87 -2.7 1,274,888 + IAI47_06265 0.87 +0.4 1,274,888 + IAI47_06265 0.87 -0.2 1,274,889 - IAI47_06265 0.87 +0.5 1,274,978 + +1.6 1,274,978 + +1.0 1,274,979 - -1.8 1,275,015 - -0.4 1,275,015 - -2.0 1,275,020 + +0.6 1,275,046 + +1.7 1,275,070 - -0.0 1,275,080 + +0.4 1,275,152 + +1.3 1,275,153 - -1.6 1,275,201 + +0.2 1,275,201 + +0.2 1,275,201 + -0.0 1,275,202 - -1.3 1,275,202 - -2.3 1,275,202 - -1.8
Or see this region's nucleotide sequence