Experiment: L-Malic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_22480 and AO356_22485 are separated by 63 nucleotides AO356_22485 and AO356_22490 are separated by 86 nucleotides
AO356_22480: AO356_22480 - oxidoreductase, at 5,023,651 to 5,025,216
_22480
AO356_22485: AO356_22485 - hypothetical protein, at 5,025,280 to 5,026,053
_22485
AO356_22490: AO356_22490 - phosphohydrolase, at 5,026,140 to 5,027,579
_22490
Position (kb) 5025
5026
5027 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5024.285 kb on + strand, within AO356_22480 at 5024.285 kb on - strand, within AO356_22480 at 5024.296 kb on - strand, within AO356_22480 at 5024.296 kb on - strand, within AO356_22480 at 5024.463 kb on - strand, within AO356_22480 at 5024.463 kb on - strand, within AO356_22480 at 5024.521 kb on - strand, within AO356_22480 at 5024.591 kb on + strand, within AO356_22480 at 5024.591 kb on + strand, within AO356_22480 at 5024.591 kb on + strand, within AO356_22480 at 5024.591 kb on + strand, within AO356_22480 at 5024.591 kb on + strand, within AO356_22480 at 5024.592 kb on - strand, within AO356_22480 at 5024.600 kb on + strand, within AO356_22480 at 5024.632 kb on + strand, within AO356_22480 at 5024.632 kb on + strand, within AO356_22480 at 5024.632 kb on + strand, within AO356_22480 at 5024.632 kb on + strand, within AO356_22480 at 5024.632 kb on + strand, within AO356_22480 at 5024.632 kb on + strand, within AO356_22480 at 5024.633 kb on - strand, within AO356_22480 at 5024.633 kb on - strand, within AO356_22480 at 5024.633 kb on - strand, within AO356_22480 at 5024.633 kb on - strand, within AO356_22480 at 5024.837 kb on + strand, within AO356_22480 at 5024.837 kb on + strand, within AO356_22480 at 5024.838 kb on - strand, within AO356_22480 at 5025.191 kb on + strand at 5025.192 kb on - strand at 5025.192 kb on - strand at 5025.310 kb on + strand at 5025.311 kb on - strand at 5025.602 kb on + strand, within AO356_22485 at 5025.603 kb on - strand, within AO356_22485 at 5025.969 kb on + strand, within AO356_22485 at 5025.969 kb on + strand, within AO356_22485 at 5025.969 kb on + strand, within AO356_22485 at 5025.969 kb on + strand, within AO356_22485 at 5025.970 kb on - strand, within AO356_22485 at 5025.970 kb on - strand, within AO356_22485 at 5025.970 kb on - strand, within AO356_22485 at 5026.118 kb on + strand at 5026.146 kb on - strand at 5026.557 kb on + strand, within AO356_22490 at 5026.557 kb on + strand, within AO356_22490 at 5026.558 kb on - strand, within AO356_22490 at 5026.855 kb on + strand, within AO356_22490 at 5026.855 kb on + strand, within AO356_22490 at 5026.856 kb on - strand, within AO356_22490 at 5026.856 kb on - strand, within AO356_22490 at 5026.925 kb on - strand, within AO356_22490 at 5026.969 kb on - strand, within AO356_22490 at 5026.969 kb on - strand, within AO356_22490 at 5027.028 kb on + strand, within AO356_22490 at 5027.029 kb on - strand, within AO356_22490 at 5027.029 kb on - strand, within AO356_22490 at 5027.029 kb on - strand, within AO356_22490 at 5027.030 kb on + strand, within AO356_22490 at 5027.030 kb on + strand, within AO356_22490 at 5027.031 kb on - strand, within AO356_22490 at 5027.031 kb on - strand, within AO356_22490
Per-strain Table
Position Strand Gene LocusTag Fraction L-Malic (C) remove 5,024,285 + AO356_22480 0.40 +0.8 5,024,285 - AO356_22480 0.40 -0.4 5,024,296 - AO356_22480 0.41 -0.2 5,024,296 - AO356_22480 0.41 +1.3 5,024,463 - AO356_22480 0.52 -0.1 5,024,463 - AO356_22480 0.52 -0.7 5,024,521 - AO356_22480 0.56 +0.1 5,024,591 + AO356_22480 0.60 +0.0 5,024,591 + AO356_22480 0.60 +0.3 5,024,591 + AO356_22480 0.60 -0.2 5,024,591 + AO356_22480 0.60 +1.1 5,024,591 + AO356_22480 0.60 +0.2 5,024,592 - AO356_22480 0.60 +1.9 5,024,600 + AO356_22480 0.61 +0.2 5,024,632 + AO356_22480 0.63 +0.5 5,024,632 + AO356_22480 0.63 +0.2 5,024,632 + AO356_22480 0.63 -0.2 5,024,632 + AO356_22480 0.63 +1.1 5,024,632 + AO356_22480 0.63 -0.4 5,024,632 + AO356_22480 0.63 -0.2 5,024,633 - AO356_22480 0.63 -0.2 5,024,633 - AO356_22480 0.63 +0.6 5,024,633 - AO356_22480 0.63 +0.3 5,024,633 - AO356_22480 0.63 +0.3 5,024,837 + AO356_22480 0.76 -0.4 5,024,837 + AO356_22480 0.76 +0.1 5,024,838 - AO356_22480 0.76 -0.8 5,025,191 + +0.6 5,025,192 - -1.1 5,025,192 - +0.3 5,025,310 + +0.6 5,025,311 - +0.5 5,025,602 + AO356_22485 0.42 +0.6 5,025,603 - AO356_22485 0.42 -0.9 5,025,969 + AO356_22485 0.89 +1.6 5,025,969 + AO356_22485 0.89 +0.4 5,025,969 + AO356_22485 0.89 +0.6 5,025,969 + AO356_22485 0.89 +0.5 5,025,970 - AO356_22485 0.89 -0.4 5,025,970 - AO356_22485 0.89 -0.2 5,025,970 - AO356_22485 0.89 +0.9 5,026,118 + +0.9 5,026,146 - +0.3 5,026,557 + AO356_22490 0.29 +0.5 5,026,557 + AO356_22490 0.29 -0.1 5,026,558 - AO356_22490 0.29 +0.2 5,026,855 + AO356_22490 0.50 +0.1 5,026,855 + AO356_22490 0.50 -1.8 5,026,856 - AO356_22490 0.50 +0.3 5,026,856 - AO356_22490 0.50 -0.2 5,026,925 - AO356_22490 0.55 -0.6 5,026,969 - AO356_22490 0.58 +1.0 5,026,969 - AO356_22490 0.58 -0.4 5,027,028 + AO356_22490 0.62 +0.6 5,027,029 - AO356_22490 0.62 +0.1 5,027,029 - AO356_22490 0.62 -0.4 5,027,029 - AO356_22490 0.62 +0.1 5,027,030 + AO356_22490 0.62 +0.1 5,027,030 + AO356_22490 0.62 +0.1 5,027,031 - AO356_22490 0.62 -0.2 5,027,031 - AO356_22490 0.62 +0.9
Or see this region's nucleotide sequence