Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_001670

Experiment: butyrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	butyrate (C)
1,856,617	+		ABIE53_001668	0.44	-1.4
1,856,637	+		ABIE53_001668	0.46	-0.6
1,856,637	+		ABIE53_001668	0.46	-0.3
1,856,638	-		ABIE53_001668	0.46	-0.1
1,856,638	-		ABIE53_001668	0.46	+0.9
1,856,638	-		ABIE53_001668	0.46	+0.2
1,856,639	+		ABIE53_001668	0.46	+1.9
1,856,640	-		ABIE53_001668	0.46	-1.0
1,856,640	-		ABIE53_001668	0.46	-1.1
1,856,651	+		ABIE53_001668	0.48	-0.5
1,856,651	+		ABIE53_001668	0.48	+1.3
1,856,652	-		ABIE53_001668	0.48	+0.9
1,856,652	-		ABIE53_001668	0.48	-1.1
1,856,670	-		ABIE53_001668	0.50	+1.2
1,856,670	-		ABIE53_001668	0.50	+0.0
1,856,670	-		ABIE53_001668	0.50	-2.9
1,856,818	+		ABIE53_001668	0.68	-1.3
1,856,818	+		ABIE53_001668	0.68	-0.7
1,856,818	+		ABIE53_001668	0.68	+0.2
1,856,818	+		ABIE53_001668	0.68	-0.7
1,856,818	+		ABIE53_001668	0.68	+0.5
1,856,818	+		ABIE53_001668	0.68	+1.3
1,856,818	+		ABIE53_001668	0.68	-0.4
1,856,819	-		ABIE53_001668	0.68	-0.6
1,856,923	+		ABIE53_001668	0.81	+0.2
1,856,923	+		ABIE53_001668	0.81	-0.6
1,856,923	+		ABIE53_001668	0.81	+0.4
1,856,924	-		ABIE53_001668	0.81	-1.6
1,856,924	-		ABIE53_001668	0.81	-1.6
1,856,924	-		ABIE53_001668	0.81	+0.3
1,856,924	-		ABIE53_001668	0.81	+2.2
1,856,924	-		ABIE53_001668	0.81	-1.5
1,856,925	+		ABIE53_001668	0.81	-0.6
1,856,925	+		ABIE53_001668	0.81	-2.0
1,856,925	+		ABIE53_001668	0.81	-0.7
1,856,926	-		ABIE53_001668	0.82	-0.4
1,856,926	-		ABIE53_001668	0.82	+0.9
1,856,926	-		ABIE53_001668	0.82	-0.4
1,856,926	-		ABIE53_001668	0.82	-1.2
1,856,926	-		ABIE53_001668	0.82	-0.3
1,856,926	-		ABIE53_001668	0.82	+1.2
1,856,926	-		ABIE53_001668	0.82	+0.7
1,856,926	-		ABIE53_001668	0.82	-1.7
1,856,926	-		ABIE53_001668	0.82	-1.0
1,856,928	-		ABIE53_001668	0.82	+0.6
1,856,933	+		ABIE53_001668	0.82	-0.3
1,856,933	+		ABIE53_001668	0.82	+0.3
1,856,933	+		ABIE53_001668	0.82	+0.3
1,856,934	-		ABIE53_001668	0.83	-0.3
1,856,934	-		ABIE53_001668	0.83	+0.9
1,857,012	-				-1.4
1,857,026	+				-0.2
1,857,026	+				-0.5
1,857,026	+				+0.4
1,857,026	+				-0.8
1,857,026	+				-0.2
1,857,027	-				+0.2
1,857,027	-				-0.9
1,857,027	-				+0.9
1,857,027	-				-0.5
1,857,027	-				-1.3
1,857,027	-				+0.1
1,857,058	+				+0.7
1,857,058	+				+0.1
1,857,058	+				-0.6
1,857,058	+				-0.7
1,857,059	-				-0.3
1,857,059	-				-0.6
1,857,102	+				-0.9
1,857,102	+				-0.3
1,857,102	+				+0.2
1,857,102	+				-0.4
1,857,102	+				+1.2
1,857,102	+				-0.5
1,857,102	+				-0.3
1,857,103	-				+0.5
1,857,103	-				+1.2
1,857,108	+				-0.3
1,857,150	+		ABIE53_001669	0.17	+0.4
1,857,231	-		ABIE53_001669	0.74	+1.3
1,857,244	+		ABIE53_001669	0.84	-1.0
1,857,244	+		ABIE53_001669	0.84	-0.2
1,857,244	+		ABIE53_001669	0.84	-0.1
1,857,244	+		ABIE53_001669	0.84	+0.9
1,857,244	+		ABIE53_001669	0.84	-1.1
1,857,245	-		ABIE53_001669	0.84	-0.6
1,857,302	+				+0.5
1,857,303	-				-0.0
1,857,303	-				+0.2
1,857,303	-				+1.5
1,857,478	+				+1.1
1,857,478	+				+0.2
1,857,479	-				-0.5
1,857,521	+				-0.6
1,857,592	-				-1.0
1,857,616	-				-0.5
1,857,640	+				-0.6
1,857,640	+				-0.6
1,857,640	+				+0.3
1,857,640	+				-2.1
1,857,640	+				+1.2
1,857,640	+				+1.2
1,857,641	-				-0.4
1,857,641	-				+0.2
1,857,641	-				-0.8
1,857,641	-				-0.2
1,857,713	+				-0.0
1,857,714	-				-0.6
1,857,721	+				-2.3
1,857,721	+				+0.1
1,857,722	-				+0.6
1,857,722	-				+0.0
1,857,791	+		ABIE53_001670	0.12	+0.9
1,857,926	-		ABIE53_001670	0.21	+0.4
1,857,999	+		ABIE53_001670	0.26	-1.3
1,857,999	+		ABIE53_001670	0.26	+0.5
1,857,999	+		ABIE53_001670	0.26	-0.3
1,857,999	+		ABIE53_001670	0.26	-0.3
1,857,999	+		ABIE53_001670	0.26	-0.8
1,857,999	+		ABIE53_001670	0.26	+0.4
1,857,999	+		ABIE53_001670	0.26	-0.5
1,857,999	+		ABIE53_001670	0.26	-0.8
1,857,999	+		ABIE53_001670	0.26	-0.3
1,857,999	+		ABIE53_001670	0.26	+1.6
1,858,000	-		ABIE53_001670	0.26	-2.0
1,858,000	-		ABIE53_001670	0.26	-0.8
1,858,000	-		ABIE53_001670	0.26	-1.4
1,858,000	-		ABIE53_001670	0.26	-0.8
1,858,125	-		ABIE53_001670	0.35	+0.0
1,858,125	-		ABIE53_001670	0.35	-0.6
1,858,156	+		ABIE53_001670	0.37	+0.6
1,858,236	+		ABIE53_001670	0.42	-0.3
1,858,236	+		ABIE53_001670	0.42	+0.4
1,858,237	-		ABIE53_001670	0.42	-0.3
1,858,237	-		ABIE53_001670	0.42	-2.3
1,858,237	-		ABIE53_001670	0.42	+0.1
1,858,237	-		ABIE53_001670	0.42	-0.7
1,858,243	+		ABIE53_001670	0.43	-0.5
1,858,243	+		ABIE53_001670	0.43	-1.0
1,858,244	-		ABIE53_001670	0.43	-0.5
1,858,244	-		ABIE53_001670	0.43	+0.9
1,858,255	+		ABIE53_001670	0.43	-2.2
1,858,255	+		ABIE53_001670	0.43	+0.2
1,858,255	+		ABIE53_001670	0.43	-1.9
1,858,306	-		ABIE53_001670	0.47	+1.2
1,858,321	-		ABIE53_001670	0.48	-1.2
1,858,329	+		ABIE53_001670	0.49	+0.8
1,858,330	-		ABIE53_001670	0.49	-1.5
1,858,359	-		ABIE53_001670	0.51	-0.7
1,858,400	+		ABIE53_001670	0.53	-0.3
1,858,401	-		ABIE53_001670	0.53	+1.6
1,858,427	+		ABIE53_001670	0.55	-1.2
1,858,427	+		ABIE53_001670	0.55	+0.7
1,858,428	-		ABIE53_001670	0.55	-0.6
1,858,444	+		ABIE53_001670	0.56	-0.4
1,858,444	+		ABIE53_001670	0.56	+0.4
1,858,444	+		ABIE53_001670	0.56	+0.8
1,858,444	+		ABIE53_001670	0.56	-0.7
1,858,445	-		ABIE53_001670	0.56	+0.0
1,858,445	-		ABIE53_001670	0.56	+0.2
1,858,445	-		ABIE53_001670	0.56	+0.6
1,858,445	-		ABIE53_001670	0.56	+0.6
1,858,445	-		ABIE53_001670	0.56	-0.6
1,858,529	+		ABIE53_001670	0.62	-2.4
1,858,529	+		ABIE53_001670	0.62	-1.1
1,858,529	+		ABIE53_001670	0.62	+0.5
1,858,530	-		ABIE53_001670	0.62	+0.7
1,858,530	-		ABIE53_001670	0.62	+0.2
1,858,601	+		ABIE53_001670	0.67	-0.7
1,858,601	+		ABIE53_001670	0.67	+0.2
1,858,601	+		ABIE53_001670	0.67	-0.9
1,858,601	+		ABIE53_001670	0.67	-0.8
1,858,601	+		ABIE53_001670	0.67	+2.3
1,858,601	+		ABIE53_001670	0.67	-0.5
1,858,602	-		ABIE53_001670	0.67	-1.5
1,858,636	+		ABIE53_001670	0.69	-0.5
1,858,637	-		ABIE53_001670	0.69	-0.8
1,858,637	-		ABIE53_001670	0.69	-0.2
1,858,637	-		ABIE53_001670	0.69	-1.5
1,858,637	-		ABIE53_001670	0.69	-0.7
1,858,637	-		ABIE53_001670	0.69	-1.3
1,858,637	-		ABIE53_001670	0.69	+1.2
1,858,637	-		ABIE53_001670	0.69	+0.6
1,858,681	+		ABIE53_001670	0.72	+3.2
1,858,681	+		ABIE53_001670	0.72	-0.1
1,858,681	+		ABIE53_001670	0.72	-1.4
1,858,681	+		ABIE53_001670	0.72	-0.6
1,858,681	+		ABIE53_001670	0.72	+1.6
1,858,681	+		ABIE53_001670	0.72	+0.2
1,858,681	+		ABIE53_001670	0.72	+0.1
1,858,681	+		ABIE53_001670	0.72	+0.0
1,858,681	+		ABIE53_001670	0.72	+0.1
1,858,681	+		ABIE53_001670	0.72	-0.1
1,858,681	+		ABIE53_001670	0.72	-0.2
1,858,682	-		ABIE53_001670	0.73	-1.0
1,858,682	-		ABIE53_001670	0.73	+0.8
1,858,682	-		ABIE53_001670	0.73	-1.7
1,858,682	-		ABIE53_001670	0.73	-0.7
1,858,682	-		ABIE53_001670	0.73	-1.0
1,858,682	-		ABIE53_001670	0.73	-1.0
1,858,682	-		ABIE53_001670	0.73	-1.2
1,858,682	-		ABIE53_001670	0.73	-1.5
1,858,704	-		ABIE53_001670	0.74	-0.9
1,858,704	-		ABIE53_001670	0.74	-0.9
1,858,773	+		ABIE53_001670	0.79	+0.7
1,858,800	+		ABIE53_001670	0.81	+0.5
1,858,800	+		ABIE53_001670	0.81	-1.3
1,858,800	+		ABIE53_001670	0.81	-1.9
1,858,801	-		ABIE53_001670	0.81	+0.6
1,858,803	-		ABIE53_001670	0.81	+1.4
1,858,830	+		ABIE53_001670	0.83	+0.6
1,858,830	+		ABIE53_001670	0.83	-0.6
1,858,830	+		ABIE53_001670	0.83	-0.4
1,858,831	-		ABIE53_001670	0.83	+1.2
1,858,831	-		ABIE53_001670	0.83	+1.0
1,858,831	-		ABIE53_001670	0.83	+0.3
1,858,831	-		ABIE53_001670	0.83	+1.9
1,858,831	-		ABIE53_001670	0.83	+0.6
1,858,841	+		ABIE53_001670	0.83	-0.3
1,858,843	+		ABIE53_001670	0.83	-0.4
1,858,844	-		ABIE53_001670	0.84	-1.2
1,858,908	+		ABIE53_001670	0.88	-0.6
1,858,908	+		ABIE53_001670	0.88	+1.4
1,858,908	+		ABIE53_001670	0.88	-0.5
1,858,908	+		ABIE53_001670	0.88	+0.1
1,858,909	-		ABIE53_001670	0.88	-0.1
1,858,909	-		ABIE53_001670	0.88	+1.6
1,858,909	-		ABIE53_001670	0.88	-0.2
1,858,909	-		ABIE53_001670	0.88	+1.0
1,858,914	+		ABIE53_001670	0.88	-0.5
1,858,914	+		ABIE53_001670	0.88	+0.9
1,858,914	+		ABIE53_001670	0.88	+0.6
1,858,914	+		ABIE53_001670	0.88	-1.0
1,858,914	+		ABIE53_001670	0.88	-0.6
1,858,914	+		ABIE53_001670	0.88	+0.9
1,858,914	+		ABIE53_001670	0.88	-1.0
1,858,914	+		ABIE53_001670	0.88	-2.2
1,858,914	+		ABIE53_001670	0.88	+0.7
1,858,914	+		ABIE53_001670	0.88	-0.2
1,858,914	+		ABIE53_001670	0.88	+0.6
1,858,914	+		ABIE53_001670	0.88	-0.0
1,858,915	-		ABIE53_001670	0.88	+0.2
1,858,915	-		ABIE53_001670	0.88	-0.8
1,858,915	-		ABIE53_001670	0.88	+1.5
1,858,915	-		ABIE53_001670	0.88	-0.3
1,858,921	+		ABIE53_001670	0.89	+0.2
1,858,921	+		ABIE53_001670	0.89	-2.4
1,858,921	+		ABIE53_001670	0.89	+0.6
1,858,921	+		ABIE53_001670	0.89	-1.5
1,858,921	+		ABIE53_001670	0.89	+0.2
1,858,922	-		ABIE53_001670	0.89	-0.6
1,858,922	-		ABIE53_001670	0.89	-1.1
1,858,937	+		ABIE53_001670	0.90	+2.2
1,858,937	+		ABIE53_001670	0.90	+0.2
1,858,938	-		ABIE53_001670	0.90	+0.9
1,858,971	+				-0.1
1,858,971	+				-1.3
1,858,971	+				+0.3
1,858,971	+				-0.9
1,858,971	+				+1.6
1,858,971	+				-0.8
1,858,972	-				-0.7
1,858,972	-				+1.2
1,858,972	-				-1.2
1,858,972	-				-0.7
1,859,002	+				+0.1
1,859,063	+				-0.5
1,859,063	+				-0.9
1,859,063	+				+0.2
1,859,063	+				+0.5
1,859,064	-				-0.3
1,859,064	-				-0.1
1,859,064	-				+0.8
1,859,083	+				-1.4
1,859,083	+				+0.6
1,859,083	+				-0.2
1,859,083	+				+1.4
1,859,083	+				-0.1
1,859,083	+				+0.4
1,859,083	+				-1.2
1,859,084	-				+0.9
1,859,084	-				-1.6
1,859,084	-				-0.2
1,859,084	-				-0.9
1,859,084	-				-0.6
1,859,084	-				-1.3
1,859,187	+				-1.5
1,859,188	-				+1.9
1,859,188	-				-1.8
1,859,196	-				-0.1
1,859,227	+		ABIE53_001671	0.10	-0.6
1,859,227	+		ABIE53_001671	0.10	-1.2
1,859,227	+		ABIE53_001671	0.10	-1.2
1,859,227	+		ABIE53_001671	0.10	-0.4
1,859,227	+		ABIE53_001671	0.10	-0.9
1,859,227	+		ABIE53_001671	0.10	-1.1
1,859,227	+		ABIE53_001671	0.10	-1.5
1,859,227	+		ABIE53_001671	0.10	-0.4
1,859,227	+		ABIE53_001671	0.10	-1.9
1,859,228	-		ABIE53_001671	0.10	-0.4
1,859,228	-		ABIE53_001671	0.10	+0.1
1,859,228	-		ABIE53_001671	0.10	-0.1
1,859,228	-		ABIE53_001671	0.10	-0.4
1,859,228	-		ABIE53_001671	0.10	+0.0
1,859,228	-		ABIE53_001671	0.10	+0.1
1,859,228	-		ABIE53_001671	0.10	-0.6
1,859,228	-		ABIE53_001671	0.10	+1.0
1,859,228	-		ABIE53_001671	0.10	-1.2
1,859,228	-		ABIE53_001671	0.10	-0.5
1,859,228	-		ABIE53_001671	0.10	+0.2
1,859,228	-		ABIE53_001671	0.10	-0.7
1,859,231	+		ABIE53_001671	0.11	+0.0
1,859,231	+		ABIE53_001671	0.11	-2.5
1,859,231	+		ABIE53_001671	0.11	+0.1
1,859,232	-		ABIE53_001671	0.11	+0.6
1,859,232	-		ABIE53_001671	0.11	+0.5
1,859,232	-		ABIE53_001671	0.11	-1.2
1,859,232	-		ABIE53_001671	0.11	-1.1
1,859,370	+		ABIE53_001671	0.30	+0.5
1,859,370	+		ABIE53_001671	0.30	+0.2
1,859,370	+		ABIE53_001671	0.30	-0.2
1,859,371	-		ABIE53_001671	0.30	-1.3
1,859,371	-		ABIE53_001671	0.30	+0.2
1,859,371	-		ABIE53_001671	0.30	+1.2
1,859,371	-		ABIE53_001671	0.30	+0.4
1,859,413	+		ABIE53_001671	0.36	+0.4
1,859,413	+		ABIE53_001671	0.36	-0.1
1,859,414	-		ABIE53_001671	0.36	+1.0
1,859,414	-		ABIE53_001671	0.36	+0.6
1,859,485	+		ABIE53_001671	0.46	-0.3
1,859,485	+		ABIE53_001671	0.46	+1.1
1,859,485	+		ABIE53_001671	0.46	-0.1
1,859,485	+		ABIE53_001671	0.46	-0.5
1,859,486	-		ABIE53_001671	0.46	+1.6
1,859,486	-		ABIE53_001671	0.46	+0.1
1,859,500	-		ABIE53_001671	0.48	+0.2
1,859,516	+		ABIE53_001671	0.50	+1.9
1,859,516	+		ABIE53_001671	0.50	+0.8
1,859,516	+		ABIE53_001671	0.50	+1.0
1,859,516	+		ABIE53_001671	0.50	-0.7
1,859,517	-		ABIE53_001671	0.50	+0.5
1,859,517	-		ABIE53_001671	0.50	-0.1
1,859,517	-		ABIE53_001671	0.50	-1.7
1,859,517	-		ABIE53_001671	0.50	+0.5
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1,859,517	-		ABIE53_001671	0.50	+0.0
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1,859,541	-		ABIE53_001671	0.53	+0.1
1,859,645	+		ABIE53_001671	0.68	+0.6
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1,859,646	-		ABIE53_001671	0.68	-0.3
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1,859,843	+				+0.1
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