Experiment: LB, 23C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20821 and SM_b20822 are separated by 244 nucleotides SM_b20822 and SM_b20823 are separated by 9 nucleotides
SM_b20821: SM_b20821 - ATPGTP-binding hydroxymethyltransferase, at 610,001 to 610,801
_b20821
SM_b20822: SM_b20822 - cell surface polysaccharide export ABC-2 transporter permease, close relative to wzm1Y20833, at 611,046 to 611,870
_b20822
SM_b20823: SM_b20823 - cell surface saccharide synthesis protein, at 611,880 to 612,911
_b20823
Position (kb) 611
612 Strain fitness (log2 ratio) -2
-1
0
1
2 at 610.229 kb on + strand, within SM_b20821 at 610.229 kb on + strand, within SM_b20821 at 610.230 kb on - strand, within SM_b20821 at 610.568 kb on + strand, within SM_b20821 at 610.568 kb on + strand, within SM_b20821 at 610.568 kb on + strand, within SM_b20821 at 610.610 kb on + strand, within SM_b20821 at 610.611 kb on - strand, within SM_b20821 at 610.631 kb on + strand, within SM_b20821 at 610.631 kb on + strand, within SM_b20821 at 610.653 kb on - strand, within SM_b20821 at 610.924 kb on + strand at 610.925 kb on - strand at 611.077 kb on + strand at 611.077 kb on + strand at 611.077 kb on + strand at 611.077 kb on + strand at 611.077 kb on + strand at 611.078 kb on - strand at 611.078 kb on - strand at 611.181 kb on + strand, within SM_b20822 at 611.182 kb on - strand, within SM_b20822 at 611.316 kb on + strand, within SM_b20822 at 611.376 kb on + strand, within SM_b20822 at 611.377 kb on - strand, within SM_b20822 at 611.377 kb on - strand, within SM_b20822 at 611.381 kb on + strand, within SM_b20822 at 611.471 kb on + strand, within SM_b20822 at 611.598 kb on + strand, within SM_b20822 at 611.782 kb on - strand, within SM_b20822 at 611.882 kb on - strand at 611.882 kb on - strand at 611.882 kb on - strand at 611.977 kb on + strand at 611.981 kb on + strand at 611.982 kb on + strand at 611.982 kb on + strand at 611.982 kb on + strand at 611.982 kb on + strand at 611.982 kb on + strand at 611.982 kb on + strand at 611.982 kb on + strand at 611.982 kb on + strand at 611.982 kb on + strand at 611.983 kb on - strand at 611.983 kb on - strand at 611.983 kb on - strand at 611.983 kb on - strand at 611.983 kb on - strand at 611.983 kb on - strand at 611.983 kb on - strand at 611.983 kb on - strand at 611.983 kb on - strand at 611.983 kb on - strand at 611.986 kb on + strand, within SM_b20823 at 611.986 kb on + strand, within SM_b20823 at 612.141 kb on - strand, within SM_b20823 at 612.148 kb on + strand, within SM_b20823 at 612.149 kb on - strand, within SM_b20823 at 612.149 kb on - strand, within SM_b20823 at 612.149 kb on - strand, within SM_b20823 at 612.149 kb on - strand, within SM_b20823 at 612.280 kb on + strand, within SM_b20823 at 612.461 kb on - strand, within SM_b20823 at 612.468 kb on - strand, within SM_b20823 at 612.541 kb on + strand, within SM_b20823 at 612.549 kb on + strand, within SM_b20823 at 612.549 kb on + strand, within SM_b20823 at 612.549 kb on + strand, within SM_b20823 at 612.549 kb on + strand, within SM_b20823 at 612.549 kb on + strand, within SM_b20823 at 612.589 kb on + strand, within SM_b20823 at 612.589 kb on + strand, within SM_b20823 at 612.590 kb on - strand, within SM_b20823 at 612.590 kb on - strand, within SM_b20823 at 612.593 kb on + strand, within SM_b20823 at 612.594 kb on - strand, within SM_b20823 at 612.676 kb on + strand, within SM_b20823 at 612.676 kb on + strand, within SM_b20823 at 612.676 kb on + strand, within SM_b20823 at 612.677 kb on - strand, within SM_b20823 at 612.681 kb on - strand, within SM_b20823 at 612.772 kb on - strand, within SM_b20823 at 612.772 kb on - strand, within SM_b20823 at 612.859 kb on - strand at 612.859 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB, 23C remove 610,229 + SM_b20821 0.28 +0.1 610,229 + SM_b20821 0.28 -0.0 610,230 - SM_b20821 0.29 -1.9 610,568 + SM_b20821 0.71 -0.0 610,568 + SM_b20821 0.71 -0.3 610,568 + SM_b20821 0.71 -1.5 610,610 + SM_b20821 0.76 +0.2 610,611 - SM_b20821 0.76 -0.5 610,631 + SM_b20821 0.79 -0.2 610,631 + SM_b20821 0.79 -1.7 610,653 - SM_b20821 0.81 -0.4 610,924 + -0.1 610,925 - -1.1 611,077 + -0.4 611,077 + -0.6 611,077 + -1.3 611,077 + -1.9 611,077 + +1.3 611,078 - -0.9 611,078 - -0.6 611,181 + SM_b20822 0.16 -1.1 611,182 - SM_b20822 0.16 -0.6 611,316 + SM_b20822 0.33 -0.7 611,376 + SM_b20822 0.40 -1.0 611,377 - SM_b20822 0.40 +0.3 611,377 - SM_b20822 0.40 -1.3 611,381 + SM_b20822 0.41 -2.5 611,471 + SM_b20822 0.52 -1.3 611,598 + SM_b20822 0.67 -0.2 611,782 - SM_b20822 0.89 -0.7 611,882 - -0.0 611,882 - +0.5 611,882 - -0.1 611,977 + -0.3 611,981 + -0.5 611,982 + +0.4 611,982 + -0.5 611,982 + -1.5 611,982 + -1.3 611,982 + +0.6 611,982 + -0.4 611,982 + -0.5 611,982 + -1.7 611,982 + -0.4 611,983 - -0.5 611,983 - +0.1 611,983 - -0.6 611,983 - -0.4 611,983 - -0.5 611,983 - -0.1 611,983 - -0.4 611,983 - -1.5 611,983 - -0.2 611,983 - +0.1 611,986 + SM_b20823 0.10 -1.9 611,986 + SM_b20823 0.10 +0.1 612,141 - SM_b20823 0.25 -0.4 612,148 + SM_b20823 0.26 -0.8 612,149 - SM_b20823 0.26 +0.1 612,149 - SM_b20823 0.26 -1.7 612,149 - SM_b20823 0.26 -0.9 612,149 - SM_b20823 0.26 -0.9 612,280 + SM_b20823 0.39 +0.3 612,461 - SM_b20823 0.56 +0.3 612,468 - SM_b20823 0.57 +0.4 612,541 + SM_b20823 0.64 -0.5 612,549 + SM_b20823 0.65 -0.6 612,549 + SM_b20823 0.65 -0.2 612,549 + SM_b20823 0.65 -0.0 612,549 + SM_b20823 0.65 -0.7 612,549 + SM_b20823 0.65 +0.1 612,589 + SM_b20823 0.69 +2.6 612,589 + SM_b20823 0.69 +0.1 612,590 - SM_b20823 0.69 -0.7 612,590 - SM_b20823 0.69 +0.5 612,593 + SM_b20823 0.69 -0.5 612,594 - SM_b20823 0.69 -0.6 612,676 + SM_b20823 0.77 -0.8 612,676 + SM_b20823 0.77 -0.4 612,676 + SM_b20823 0.77 +1.4 612,677 - SM_b20823 0.77 +1.3 612,681 - SM_b20823 0.78 +0.3 612,772 - SM_b20823 0.86 +0.4 612,772 - SM_b20823 0.86 -0.9 612,859 - -0.5 612,859 - -0.2
Or see this region's nucleotide sequence