Strain Fitness in Pantoea sp. MT58 around IAI47_11125

Experiment: Defined media control, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Defined media control, aerobic
2,345,486	+		IAI47_11120	0.44	+0.7
2,345,486	+		IAI47_11120	0.44	-1.3
2,345,490	-		IAI47_11120	0.45	+2.8
2,345,490	-		IAI47_11120	0.45	+0.0
2,345,515	+		IAI47_11120	0.47	-2.1
2,345,515	+		IAI47_11120	0.47	-2.6
2,345,515	+		IAI47_11120	0.47	-0.4
2,345,515	+		IAI47_11120	0.47	-2.0
2,345,515	+		IAI47_11120	0.47	+1.7
2,345,515	+		IAI47_11120	0.47	+1.4
2,345,516	-		IAI47_11120	0.47	+1.1
2,345,524	+		IAI47_11120	0.47	-0.2
2,345,525	-		IAI47_11120	0.47	+0.0
2,345,525	-		IAI47_11120	0.47	-0.7
2,345,525	-		IAI47_11120	0.47	-2.7
2,345,525	-		IAI47_11120	0.47	+0.7
2,345,551	+		IAI47_11120	0.49	+0.1
2,345,563	+		IAI47_11120	0.50	+0.1
2,345,563	+		IAI47_11120	0.50	-2.4
2,345,563	+		IAI47_11120	0.50	+1.0
2,345,563	+		IAI47_11120	0.50	-0.7
2,345,563	+		IAI47_11120	0.50	+2.8
2,345,564	-		IAI47_11120	0.50	+2.1
2,345,564	-		IAI47_11120	0.50	+2.5
2,345,564	-		IAI47_11120	0.50	-0.1
2,345,564	-		IAI47_11120	0.50	+0.4
2,345,564	-		IAI47_11120	0.50	+1.5
2,345,564	-		IAI47_11120	0.50	+1.2
2,345,564	-		IAI47_11120	0.50	-1.0
2,345,647	+		IAI47_11120	0.56	-0.0
2,345,647	+		IAI47_11120	0.56	+0.5
2,345,647	+		IAI47_11120	0.56	+1.8
2,345,648	-		IAI47_11120	0.56	+1.4
2,345,648	-		IAI47_11120	0.56	+1.4
2,345,648	-		IAI47_11120	0.56	+0.5
2,345,650	+		IAI47_11120	0.56	-1.5
2,345,650	+		IAI47_11120	0.56	-1.2
2,345,650	+		IAI47_11120	0.56	+0.7
2,345,650	+		IAI47_11120	0.56	-1.0
2,345,650	+		IAI47_11120	0.56	+1.1
2,345,650	+		IAI47_11120	0.56	-1.9
2,345,650	+		IAI47_11120	0.56	+1.4
2,345,651	-		IAI47_11120	0.56	-2.4
2,345,651	-		IAI47_11120	0.56	+1.9
2,345,651	-		IAI47_11120	0.56	-0.1
2,345,651	-		IAI47_11120	0.56	-0.1
2,345,651	-		IAI47_11120	0.56	+1.8
2,345,651	-		IAI47_11120	0.56	+1.2
2,345,736	-		IAI47_11120	0.62	+0.7
2,345,745	-		IAI47_11120	0.63	+1.2
2,345,746	+		IAI47_11120	0.63	+0.6
2,345,746	+		IAI47_11120	0.63	-0.1
2,345,747	-		IAI47_11120	0.63	+0.2
2,345,747	-		IAI47_11120	0.63	+3.7
2,345,747	-		IAI47_11120	0.63	+1.4
2,345,945	-		IAI47_11120	0.76	-0.7
2,345,945	-		IAI47_11120	0.76	-3.4
2,346,062	+		IAI47_11120	0.85	-0.8
2,346,160	+				-0.4
2,346,161	-				+0.2
2,346,331	+				-0.6
2,346,338	+				+2.1
2,346,338	+				-0.0
2,346,338	+				+0.5
2,346,339	-				+0.6
2,346,343	+				-0.3
2,346,344	-				+1.3
2,346,348	+				-2.2
2,346,348	+				+0.7
2,346,349	-				-2.9
2,346,349	-				+0.8
2,346,389	+				-2.9
2,346,389	+				+0.9
2,346,389	+				+0.2
2,346,389	+				-1.0
2,346,389	+				+0.5
2,346,389	+				-2.7
2,346,390	-				+0.0
2,346,390	-				+1.4
2,346,390	-				-0.4
2,346,390	-				+3.0
2,346,391	+				-1.3
2,346,391	+				+1.4
2,346,392	-				-2.8
2,346,392	-				+2.5
2,346,392	-				+1.2
2,346,414	-				-1.8
2,346,426	+				-0.3
2,346,427	-				-1.7
2,346,469	-				+0.3
2,346,486	-				-2.5
2,346,486	-				+1.4
2,346,504	-				-0.9
2,346,504	-				-0.1
2,346,505	+				-1.2
2,346,505	+				+0.4
2,346,506	-				-2.2
2,346,506	-				-1.0
2,346,506	-				+2.5
2,346,506	-				+0.7
2,346,587	+		IAI47_11125	0.16	+1.0
2,346,667	+		IAI47_11125	0.26	-1.8
2,346,668	-		IAI47_11125	0.27	+0.8
2,346,719	+		IAI47_11125	0.33	+1.2
2,346,787	+		IAI47_11125	0.41	+0.8
2,346,799	+		IAI47_11125	0.43	+0.7
2,346,799	+		IAI47_11125	0.43	+0.3
2,346,800	-		IAI47_11125	0.43	-0.0
2,346,800	-		IAI47_11125	0.43	-2.4
2,346,803	+		IAI47_11125	0.43	+0.3
2,346,803	+		IAI47_11125	0.43	+0.1
2,346,803	+		IAI47_11125	0.43	-2.3
2,346,803	+		IAI47_11125	0.43	-2.6
2,346,803	+		IAI47_11125	0.43	-1.3
2,346,803	+		IAI47_11125	0.43	-0.7
2,346,803	+		IAI47_11125	0.43	-0.9
2,346,804	-		IAI47_11125	0.44	-0.0
2,346,804	-		IAI47_11125	0.44	+0.5
2,346,804	-		IAI47_11125	0.44	-3.1
2,346,804	-		IAI47_11125	0.44	-1.9
2,346,866	+		IAI47_11125	0.51	-0.2
2,346,867	-		IAI47_11125	0.52	-0.3
2,346,867	-		IAI47_11125	0.52	-0.0
2,346,867	-		IAI47_11125	0.52	-0.4
2,346,867	-		IAI47_11125	0.52	-0.2
2,346,867	-		IAI47_11125	0.52	-2.0
2,346,868	+		IAI47_11125	0.52	+0.1
2,346,868	+		IAI47_11125	0.52	-0.7
2,346,868	+		IAI47_11125	0.52	+0.3
2,346,868	+		IAI47_11125	0.52	+1.2
2,346,868	+		IAI47_11125	0.52	+0.1
2,346,869	-		IAI47_11125	0.52	+0.1
2,346,869	-		IAI47_11125	0.52	+0.8
2,346,869	-		IAI47_11125	0.52	-1.0
2,346,869	-		IAI47_11125	0.52	+0.7
2,346,869	-		IAI47_11125	0.52	+1.8
2,346,869	-		IAI47_11125	0.52	+1.9
2,346,869	-		IAI47_11125	0.52	-0.6
2,346,908	+		IAI47_11125	0.57	-0.7
2,346,908	+		IAI47_11125	0.57	+1.2
2,346,908	+		IAI47_11125	0.57	-2.1
2,346,908	+		IAI47_11125	0.57	-2.9
2,346,909	-		IAI47_11125	0.57	-2.4
2,346,909	-		IAI47_11125	0.57	-2.9
2,346,909	-		IAI47_11125	0.57	-0.5
2,346,909	-		IAI47_11125	0.57	-2.5
2,346,912	-		IAI47_11125	0.57	-1.0
2,346,987	+		IAI47_11125	0.67	-0.5
2,347,030	+		IAI47_11125	0.72	-1.6
2,347,031	-		IAI47_11125	0.72	-2.1
2,347,031	-		IAI47_11125	0.72	-1.6
2,347,093	+		IAI47_11125	0.80	+1.4
2,347,253	+				-2.6
2,347,266	+				+1.7
2,347,266	+				-1.0
2,347,266	+				+0.7
2,347,266	+				-0.2
2,347,266	+				-0.0
2,347,266	+				-1.6
2,347,267	-				+0.4
2,347,267	-				+0.4
2,347,267	-				+0.3
2,347,267	-				+0.3
2,347,309	+				-2.1
2,347,309	+				-1.9
2,347,309	+				+1.2
2,347,309	+				+0.3
2,347,309	+				-0.4
2,347,310	-				+1.4
2,347,396	+		IAI47_11130	0.12	-0.1
2,347,396	+		IAI47_11130	0.12	-1.1
2,347,396	+		IAI47_11130	0.12	+0.8
2,347,526	+		IAI47_11130	0.24	-0.6
2,347,558	+		IAI47_11130	0.27	+0.6
2,347,558	+		IAI47_11130	0.27	-2.0
2,347,558	+		IAI47_11130	0.27	+1.1
2,347,559	-		IAI47_11130	0.28	-0.3
2,347,586	+		IAI47_11130	0.30	-2.3
2,347,601	+		IAI47_11130	0.31	+0.7
2,347,601	+		IAI47_11130	0.31	-0.5
2,347,602	-		IAI47_11130	0.32	-2.6
2,347,641	+		IAI47_11130	0.35	-1.0
2,347,641	+		IAI47_11130	0.35	+1.4
2,347,642	-		IAI47_11130	0.35	+1.0
2,347,655	+		IAI47_11130	0.37	-0.3
2,347,655	+		IAI47_11130	0.37	+0.4
2,347,656	-		IAI47_11130	0.37	+0.8
2,347,656	-		IAI47_11130	0.37	+1.1
2,347,663	+		IAI47_11130	0.37	-0.4
2,347,713	+		IAI47_11130	0.42	+1.1
2,347,713	+		IAI47_11130	0.42	-0.2
2,347,713	+		IAI47_11130	0.42	-3.2
2,347,713	+		IAI47_11130	0.42	-2.6
2,347,713	+		IAI47_11130	0.42	+0.3
2,347,713	+		IAI47_11130	0.42	+3.0
2,347,713	+		IAI47_11130	0.42	+0.8
2,347,714	-		IAI47_11130	0.42	-2.5
2,347,714	-		IAI47_11130	0.42	-0.7
2,347,714	-		IAI47_11130	0.42	+0.1
2,347,714	-		IAI47_11130	0.42	+0.3
2,347,714	-		IAI47_11130	0.42	+1.2
2,347,714	-		IAI47_11130	0.42	-0.0
2,347,714	-		IAI47_11130	0.42	+0.2
2,347,714	-		IAI47_11130	0.42	+0.1
2,347,714	-		IAI47_11130	0.42	+0.9
2,347,717	+		IAI47_11130	0.42	-0.6
2,347,717	+		IAI47_11130	0.42	-0.2
2,347,717	+		IAI47_11130	0.42	+0.5
2,347,717	+		IAI47_11130	0.42	-1.1
2,347,717	+		IAI47_11130	0.42	-2.7
2,347,717	+		IAI47_11130	0.42	+0.9
2,347,717	+		IAI47_11130	0.42	+0.8
2,347,717	+		IAI47_11130	0.42	+1.5
2,347,717	+		IAI47_11130	0.42	+3.1
2,347,717	+		IAI47_11130	0.42	+0.7
2,347,717	+		IAI47_11130	0.42	+0.8
2,347,718	-		IAI47_11130	0.42	+0.0
2,347,718	-		IAI47_11130	0.42	-0.8
2,347,718	-		IAI47_11130	0.42	+0.7
2,347,718	-		IAI47_11130	0.42	-1.0
2,347,718	-		IAI47_11130	0.42	-1.7
2,347,718	-		IAI47_11130	0.42	+1.9
2,347,718	-		IAI47_11130	0.42	-2.5
2,347,718	-		IAI47_11130	0.42	-0.6
2,347,718	-		IAI47_11130	0.42	+1.4
2,347,719	+		IAI47_11130	0.43	+1.3
2,347,719	+		IAI47_11130	0.43	-1.1
2,347,719	+		IAI47_11130	0.43	+1.3
2,347,720	-		IAI47_11130	0.43	-0.4
2,347,720	-		IAI47_11130	0.43	-0.7
2,347,720	-		IAI47_11130	0.43	-1.3
2,347,720	-		IAI47_11130	0.43	-2.3
2,347,720	-		IAI47_11130	0.43	-0.5
2,347,764	-		IAI47_11130	0.47	-1.0
2,347,787	-		IAI47_11130	0.49	+1.5
2,347,794	+		IAI47_11130	0.50	-1.6
2,347,794	+		IAI47_11130	0.50	+3.0
2,347,794	+		IAI47_11130	0.50	+1.7
2,347,795	-		IAI47_11130	0.50	-0.8
2,347,805	+		IAI47_11130	0.51	+1.1
2,347,805	+		IAI47_11130	0.51	-0.9
2,347,805	+		IAI47_11130	0.51	-0.9
2,347,806	-		IAI47_11130	0.51	+0.7
2,347,806	-		IAI47_11130	0.51	+1.0
2,347,806	-		IAI47_11130	0.51	+0.6
2,347,860	-		IAI47_11130	0.56	+0.6
2,347,860	-		IAI47_11130	0.56	+1.5
2,347,873	-		IAI47_11130	0.57	+1.6
2,347,873	-		IAI47_11130	0.57	-3.0
2,347,917	+		IAI47_11130	0.61	-1.5
2,347,917	+		IAI47_11130	0.61	+0.6
2,347,917	+		IAI47_11130	0.61	+3.1
2,347,917	+		IAI47_11130	0.61	-0.9
2,347,917	+		IAI47_11130	0.61	+1.3
2,347,917	+		IAI47_11130	0.61	+1.2
2,347,917	+		IAI47_11130	0.61	+1.1
2,347,918	-		IAI47_11130	0.61	-0.9
2,347,918	-		IAI47_11130	0.61	-1.4
2,347,918	-		IAI47_11130	0.61	-0.9
2,347,918	-		IAI47_11130	0.61	+0.5
2,347,918	-		IAI47_11130	0.61	-0.3
2,347,918	-		IAI47_11130	0.61	+0.0
2,347,918	-		IAI47_11130	0.61	+1.1
2,347,978	+		IAI47_11130	0.67	+0.4
2,348,042	+		IAI47_11130	0.73	-2.3
2,348,042	+		IAI47_11130	0.73	-1.0
2,348,043	-		IAI47_11130	0.73	+0.1
2,348,043	-		IAI47_11130	0.73	+4.0
2,348,043	-		IAI47_11130	0.73	+0.3
2,348,043	-		IAI47_11130	0.73	+1.5
2,348,043	-		IAI47_11130	0.73	+1.0
2,348,047	+		IAI47_11130	0.73	+0.9
2,348,047	+		IAI47_11130	0.73	+0.7
2,348,048	-		IAI47_11130	0.73	-1.3
2,348,048	-		IAI47_11130	0.73	+0.9
2,348,048	-		IAI47_11130	0.73	-0.8
2,348,164	+		IAI47_11130	0.84	-0.4
2,348,164	+		IAI47_11130	0.84	-0.3
2,348,164	+		IAI47_11130	0.84	-3.3
2,348,164	+		IAI47_11130	0.84	-0.8
2,348,164	+		IAI47_11130	0.84	-0.5
2,348,165	-		IAI47_11130	0.84	+1.5
2,348,165	-		IAI47_11130	0.84	+0.5
2,348,165	-		IAI47_11130	0.84	-1.8