Experiment: Cobalt chloride 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS21535 and HSERO_RS21540 are separated by 162 nucleotides HSERO_RS21540 and HSERO_RS21545 are separated by 356 nucleotides HSERO_RS21545 and HSERO_RS21550 are separated by 78 nucleotides
HSERO_RS21535: HSERO_RS21535 - NADH dehydrogenase, at 4,927,444 to 4,929,045
_RS21535
HSERO_RS21540: HSERO_RS21540 - alkyl hydroperoxide reductase subunit C, at 4,929,208 to 4,929,771
_RS21540
HSERO_RS21545: HSERO_RS21545 - thioesterase, at 4,930,128 to 4,930,580
_RS21545
HSERO_RS21550: HSERO_RS21550 - phosphoenolpyruvate carboxykinase, at 4,930,659 to 4,932,527
_RS21550
Position (kb) 4929
4930 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4928.495 kb on - strand, within HSERO_RS21535 at 4928.531 kb on + strand, within HSERO_RS21535 at 4928.539 kb on - strand, within HSERO_RS21535 at 4928.566 kb on - strand, within HSERO_RS21535 at 4928.717 kb on + strand, within HSERO_RS21535 at 4928.860 kb on + strand, within HSERO_RS21535 at 4929.311 kb on + strand, within HSERO_RS21540 at 4929.755 kb on - strand at 4930.139 kb on - strand at 4930.271 kb on + strand, within HSERO_RS21545 at 4930.330 kb on + strand, within HSERO_RS21545 at 4930.433 kb on + strand, within HSERO_RS21545 at 4930.472 kb on + strand, within HSERO_RS21545 at 4930.526 kb on + strand, within HSERO_RS21545 at 4930.536 kb on - strand at 4930.642 kb on + strand at 4930.650 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.2 mM remove 4,928,495 - HSERO_RS21535 0.66 -1.3 4,928,531 + HSERO_RS21535 0.68 -0.9 4,928,539 - HSERO_RS21535 0.68 +0.0 4,928,566 - HSERO_RS21535 0.70 -0.0 4,928,717 + HSERO_RS21535 0.79 -1.9 4,928,860 + HSERO_RS21535 0.88 -0.3 4,929,311 + HSERO_RS21540 0.18 -0.1 4,929,755 - -1.5 4,930,139 - -0.1 4,930,271 + HSERO_RS21545 0.32 +2.3 4,930,330 + HSERO_RS21545 0.45 -0.5 4,930,433 + HSERO_RS21545 0.67 +0.1 4,930,472 + HSERO_RS21545 0.76 -0.1 4,930,526 + HSERO_RS21545 0.88 +1.3 4,930,536 - +2.6 4,930,642 + +0.3 4,930,650 - +0.3
Or see this region's nucleotide sequence