Experiment: Cobalt chloride 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS20690 and HSERO_RS20695 are separated by 36 nucleotides HSERO_RS20695 and HSERO_RS20700 are separated by 46 nucleotides HSERO_RS20700 and HSERO_RS20705 are separated by 25 nucleotides HSERO_RS20705 and HSERO_RS20710 are separated by 17 nucleotides
HSERO_RS20690: HSERO_RS20690 - phosphopantetheine adenylyltransferase, at 4,742,787 to 4,743,269
_RS20690
HSERO_RS20695: HSERO_RS20695 - methyltransferase, at 4,743,306 to 4,743,980
_RS20695
HSERO_RS20700: HSERO_RS20700 - zinc protease, at 4,744,027 to 4,745,343
_RS20700
HSERO_RS20705: HSERO_RS20705 - cobyrinic acid a,c-diamide synthase, at 4,745,369 to 4,746,028
_RS20705
HSERO_RS20710: HSERO_RS20710 - peptidase M16, at 4,746,046 to 4,747,425
_RS20710
Position (kb) 4744
4745
4746 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 4743.383 kb on + strand, within HSERO_RS20695 at 4743.447 kb on + strand, within HSERO_RS20695 at 4743.447 kb on + strand, within HSERO_RS20695 at 4743.470 kb on + strand, within HSERO_RS20695 at 4743.536 kb on + strand, within HSERO_RS20695 at 4743.536 kb on + strand, within HSERO_RS20695 at 4743.560 kb on + strand, within HSERO_RS20695 at 4743.567 kb on + strand, within HSERO_RS20695 at 4743.603 kb on + strand, within HSERO_RS20695 at 4743.611 kb on - strand, within HSERO_RS20695 at 4743.616 kb on + strand, within HSERO_RS20695 at 4743.707 kb on + strand, within HSERO_RS20695 at 4743.746 kb on + strand, within HSERO_RS20695 at 4743.748 kb on - strand, within HSERO_RS20695 at 4743.800 kb on - strand at 4743.977 kb on - strand at 4744.024 kb on + strand at 4744.024 kb on + strand at 4744.140 kb on + strand at 4744.414 kb on - strand, within HSERO_RS20700 at 4744.488 kb on - strand, within HSERO_RS20700 at 4744.585 kb on + strand, within HSERO_RS20700 at 4744.848 kb on + strand, within HSERO_RS20700 at 4744.848 kb on + strand, within HSERO_RS20700 at 4744.853 kb on + strand, within HSERO_RS20700 at 4744.856 kb on - strand, within HSERO_RS20700 at 4744.856 kb on - strand, within HSERO_RS20700 at 4744.888 kb on - strand, within HSERO_RS20700 at 4744.961 kb on - strand, within HSERO_RS20700 at 4745.019 kb on + strand, within HSERO_RS20700 at 4745.215 kb on - strand at 4745.317 kb on + strand at 4745.364 kb on + strand at 4745.376 kb on + strand at 4745.384 kb on - strand at 4745.388 kb on + strand at 4745.400 kb on + strand at 4745.400 kb on + strand at 4745.408 kb on - strand at 4745.490 kb on - strand, within HSERO_RS20705 at 4745.768 kb on + strand, within HSERO_RS20705 at 4745.831 kb on + strand, within HSERO_RS20705 at 4746.025 kb on + strand at 4746.162 kb on - strand at 4746.206 kb on + strand, within HSERO_RS20710 at 4746.259 kb on + strand, within HSERO_RS20710
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.2 mM remove 4,743,383 + HSERO_RS20695 0.11 +0.2 4,743,447 + HSERO_RS20695 0.21 -0.7 4,743,447 + HSERO_RS20695 0.21 -2.0 4,743,470 + HSERO_RS20695 0.24 +0.5 4,743,536 + HSERO_RS20695 0.34 +0.0 4,743,536 + HSERO_RS20695 0.34 +0.3 4,743,560 + HSERO_RS20695 0.38 -0.3 4,743,567 + HSERO_RS20695 0.39 +0.6 4,743,603 + HSERO_RS20695 0.44 +2.1 4,743,611 - HSERO_RS20695 0.45 -0.2 4,743,616 + HSERO_RS20695 0.46 +0.8 4,743,707 + HSERO_RS20695 0.59 +0.8 4,743,746 + HSERO_RS20695 0.65 -0.5 4,743,748 - HSERO_RS20695 0.65 +0.3 4,743,800 - +1.4 4,743,977 - +0.1 4,744,024 + -0.4 4,744,024 + -1.0 4,744,140 + +1.9 4,744,414 - HSERO_RS20700 0.29 +1.0 4,744,488 - HSERO_RS20700 0.35 -1.1 4,744,585 + HSERO_RS20700 0.42 +0.4 4,744,848 + HSERO_RS20700 0.62 +0.4 4,744,848 + HSERO_RS20700 0.62 +1.4 4,744,853 + HSERO_RS20700 0.63 -0.3 4,744,856 - HSERO_RS20700 0.63 +0.5 4,744,856 - HSERO_RS20700 0.63 -0.4 4,744,888 - HSERO_RS20700 0.65 +3.2 4,744,961 - HSERO_RS20700 0.71 +0.3 4,745,019 + HSERO_RS20700 0.75 -2.7 4,745,215 - -0.7 4,745,317 + -1.4 4,745,364 + +0.0 4,745,376 + +0.4 4,745,384 - +0.3 4,745,388 + -0.0 4,745,400 + +0.9 4,745,400 + +1.1 4,745,408 - -1.3 4,745,490 - HSERO_RS20705 0.18 +2.7 4,745,768 + HSERO_RS20705 0.60 +0.3 4,745,831 + HSERO_RS20705 0.70 +0.4 4,746,025 + +1.2 4,746,162 - +0.6 4,746,206 + HSERO_RS20710 0.12 +0.7 4,746,259 + HSERO_RS20710 0.15 -0.4
Or see this region's nucleotide sequence