Experiment: Cobalt chloride 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS02000 and HSERO_RS02005 are separated by 133 nucleotides HSERO_RS02005 and HSERO_RS02010 are separated by 75 nucleotides HSERO_RS02010 and HSERO_RS02015 are separated by 103 nucleotides
HSERO_RS02000: HSERO_RS02000 - magnesium transporter, at 438,009 to 438,974
_RS02000
HSERO_RS02005: HSERO_RS02005 - membrane protein, at 439,108 to 439,578
_RS02005
HSERO_RS02010: HSERO_RS02010 - anhydro-N-acetylmuramic acid kinase, at 439,654 to 440,781
_RS02010
HSERO_RS02015: HSERO_RS02015 - peptidase M23, at 440,885 to 442,282
_RS02015
Position (kb) 439
440
441 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 438.656 kb on + strand, within HSERO_RS02000 at 438.980 kb on + strand at 438.988 kb on - strand at 439.375 kb on + strand, within HSERO_RS02005 at 439.388 kb on - strand, within HSERO_RS02005 at 439.455 kb on + strand, within HSERO_RS02005 at 439.500 kb on - strand, within HSERO_RS02005 at 439.580 kb on + strand at 439.831 kb on + strand, within HSERO_RS02010 at 439.888 kb on + strand, within HSERO_RS02010 at 439.914 kb on + strand, within HSERO_RS02010 at 439.951 kb on + strand, within HSERO_RS02010 at 439.968 kb on - strand, within HSERO_RS02010 at 439.968 kb on - strand, within HSERO_RS02010 at 439.997 kb on - strand, within HSERO_RS02010 at 440.020 kb on + strand, within HSERO_RS02010 at 440.214 kb on - strand, within HSERO_RS02010 at 440.279 kb on + strand, within HSERO_RS02010 at 440.742 kb on + strand at 440.763 kb on + strand at 440.764 kb on + strand at 440.880 kb on - strand at 441.376 kb on - strand, within HSERO_RS02015 at 441.731 kb on + strand, within HSERO_RS02015 at 441.764 kb on - strand, within HSERO_RS02015
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.2 mM remove 438,656 + HSERO_RS02000 0.67 +4.7 438,980 + -0.7 438,988 - +0.3 439,375 + HSERO_RS02005 0.57 +1.9 439,388 - HSERO_RS02005 0.59 +1.0 439,455 + HSERO_RS02005 0.74 +0.0 439,500 - HSERO_RS02005 0.83 +1.2 439,580 + +0.4 439,831 + HSERO_RS02010 0.16 +0.0 439,888 + HSERO_RS02010 0.21 -0.3 439,914 + HSERO_RS02010 0.23 +0.3 439,951 + HSERO_RS02010 0.26 -1.3 439,968 - HSERO_RS02010 0.28 -0.2 439,968 - HSERO_RS02010 0.28 +0.3 439,997 - HSERO_RS02010 0.30 -0.8 440,020 + HSERO_RS02010 0.32 -0.2 440,214 - HSERO_RS02010 0.50 -0.2 440,279 + HSERO_RS02010 0.55 -0.6 440,742 + -2.7 440,763 + -0.3 440,764 + -2.6 440,880 - -0.1 441,376 - HSERO_RS02015 0.35 -1.9 441,731 + HSERO_RS02015 0.61 -1.3 441,764 - HSERO_RS02015 0.63 -0.9
Or see this region's nucleotide sequence