Experiment: Cobalt chloride 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS00070 and HSERO_RS00075 are separated by 202 nucleotides HSERO_RS00075 and HSERO_RS00080 are separated by 38 nucleotides HSERO_RS00080 and HSERO_RS00085 are separated by 47 nucleotides HSERO_RS00085 and HSERO_RS00090 are separated by 263 nucleotides
HSERO_RS00070: HSERO_RS00070 - hypothetical protein, at 22,849 to 23,139
_RS00070
HSERO_RS00075: HSERO_RS00075 - transcriptional regulator, at 23,342 to 24,007
_RS00075
HSERO_RS00080: HSERO_RS00080 - histidine kinase, at 24,046 to 25,449
_RS00080
HSERO_RS00085: HSERO_RS00085 - transcriptional regulator, at 25,497 to 25,766
_RS00085
HSERO_RS00090: HSERO_RS00090 - hypothetical protein, at 26,030 to 27,307
_RS00090
Position (kb) 24
25
26 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 23.190 kb on + strand at 23.191 kb on - strand at 23.241 kb on - strand at 23.427 kb on + strand, within HSERO_RS00075 at 23.455 kb on - strand, within HSERO_RS00075 at 23.564 kb on - strand, within HSERO_RS00075 at 23.566 kb on + strand, within HSERO_RS00075 at 23.574 kb on - strand, within HSERO_RS00075 at 23.588 kb on + strand, within HSERO_RS00075 at 23.596 kb on - strand at 23.626 kb on + strand, within HSERO_RS00075 at 23.633 kb on - strand, within HSERO_RS00075 at 23.643 kb on - strand, within HSERO_RS00075 at 23.679 kb on - strand, within HSERO_RS00075 at 23.687 kb on - strand, within HSERO_RS00075 at 23.691 kb on - strand, within HSERO_RS00075 at 23.709 kb on - strand, within HSERO_RS00075 at 23.779 kb on - strand, within HSERO_RS00075 at 23.987 kb on + strand at 24.012 kb on + strand at 24.558 kb on - strand, within HSERO_RS00080 at 24.838 kb on + strand, within HSERO_RS00080 at 24.838 kb on + strand, within HSERO_RS00080 at 24.848 kb on + strand, within HSERO_RS00080 at 24.851 kb on - strand, within HSERO_RS00080 at 24.858 kb on + strand, within HSERO_RS00080 at 24.889 kb on + strand, within HSERO_RS00080 at 24.897 kb on - strand, within HSERO_RS00080 at 24.974 kb on + strand, within HSERO_RS00080 at 24.992 kb on + strand, within HSERO_RS00080 at 25.060 kb on + strand, within HSERO_RS00080 at 25.068 kb on - strand, within HSERO_RS00080 at 25.114 kb on + strand, within HSERO_RS00080 at 25.341 kb on - strand at 25.441 kb on + strand at 25.444 kb on + strand at 25.446 kb on + strand at 25.447 kb on - strand at 25.519 kb on + strand at 25.519 kb on + strand at 25.519 kb on + strand at 25.519 kb on + strand at 25.519 kb on + strand at 25.527 kb on - strand, within HSERO_RS00085 at 25.527 kb on - strand, within HSERO_RS00085 at 25.527 kb on - strand, within HSERO_RS00085 at 25.576 kb on + strand, within HSERO_RS00085 at 25.588 kb on + strand, within HSERO_RS00085 at 25.588 kb on + strand, within HSERO_RS00085 at 25.640 kb on + strand, within HSERO_RS00085 at 25.647 kb on - strand, within HSERO_RS00085 at 25.691 kb on + strand, within HSERO_RS00085 at 25.698 kb on + strand, within HSERO_RS00085 at 25.698 kb on - strand, within HSERO_RS00085 at 25.699 kb on - strand, within HSERO_RS00085 at 25.736 kb on - strand, within HSERO_RS00085 at 25.767 kb on - strand at 25.784 kb on - strand at 25.846 kb on - strand at 25.899 kb on + strand at 25.902 kb on - strand at 25.955 kb on - strand at 25.980 kb on + strand at 25.991 kb on - strand at 26.166 kb on - strand, within HSERO_RS00090 at 26.176 kb on - strand, within HSERO_RS00090 at 26.282 kb on + strand, within HSERO_RS00090 at 26.283 kb on + strand, within HSERO_RS00090 at 26.287 kb on + strand, within HSERO_RS00090 at 26.290 kb on - strand, within HSERO_RS00090 at 26.290 kb on - strand, within HSERO_RS00090 at 26.291 kb on - strand, within HSERO_RS00090
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.2 mM remove 23,190 + +0.1 23,191 - -0.3 23,241 - +0.1 23,427 + HSERO_RS00075 0.13 -0.1 23,455 - HSERO_RS00075 0.17 -2.3 23,564 - HSERO_RS00075 0.33 -0.6 23,566 + HSERO_RS00075 0.34 +0.4 23,574 - HSERO_RS00075 0.35 -1.2 23,588 + HSERO_RS00075 0.37 -0.7 23,596 - +1.6 23,626 + HSERO_RS00075 0.43 +1.8 23,633 - HSERO_RS00075 0.44 -0.4 23,643 - HSERO_RS00075 0.45 +0.2 23,679 - HSERO_RS00075 0.51 +0.0 23,687 - HSERO_RS00075 0.52 +0.3 23,691 - HSERO_RS00075 0.52 +0.0 23,709 - HSERO_RS00075 0.55 -0.2 23,779 - HSERO_RS00075 0.66 -2.9 23,987 + -0.2 24,012 + -0.1 24,558 - HSERO_RS00080 0.36 -3.7 24,838 + HSERO_RS00080 0.56 +1.2 24,838 + HSERO_RS00080 0.56 +0.5 24,848 + HSERO_RS00080 0.57 +1.7 24,851 - HSERO_RS00080 0.57 +0.5 24,858 + HSERO_RS00080 0.58 +0.9 24,889 + HSERO_RS00080 0.60 +0.7 24,897 - HSERO_RS00080 0.61 +0.6 24,974 + HSERO_RS00080 0.66 -0.0 24,992 + HSERO_RS00080 0.67 +1.5 25,060 + HSERO_RS00080 0.72 +1.4 25,068 - HSERO_RS00080 0.73 +0.6 25,114 + HSERO_RS00080 0.76 +1.5 25,341 - +1.2 25,441 + +0.0 25,444 + +0.2 25,446 + -0.6 25,447 - +0.7 25,519 + +1.6 25,519 + +0.1 25,519 + -0.0 25,519 + -0.5 25,519 + -0.6 25,527 - HSERO_RS00085 0.11 +0.2 25,527 - HSERO_RS00085 0.11 -2.5 25,527 - HSERO_RS00085 0.11 -0.3 25,576 + HSERO_RS00085 0.29 -0.0 25,588 + HSERO_RS00085 0.34 +0.2 25,588 + HSERO_RS00085 0.34 -0.0 25,640 + HSERO_RS00085 0.53 +0.1 25,647 - HSERO_RS00085 0.56 +0.1 25,691 + HSERO_RS00085 0.72 -4.1 25,698 + HSERO_RS00085 0.74 -0.1 25,698 - HSERO_RS00085 0.74 -0.5 25,699 - HSERO_RS00085 0.75 -0.1 25,736 - HSERO_RS00085 0.89 +1.7 25,767 - +0.6 25,784 - -0.4 25,846 - -0.3 25,899 + +0.5 25,902 - +1.1 25,955 - -0.2 25,980 + -0.7 25,991 - -0.8 26,166 - HSERO_RS00090 0.11 +0.4 26,176 - HSERO_RS00090 0.11 -0.8 26,282 + HSERO_RS00090 0.20 +1.9 26,283 + HSERO_RS00090 0.20 +0.5 26,287 + HSERO_RS00090 0.20 +0.1 26,290 - HSERO_RS00090 0.20 +3.0 26,290 - HSERO_RS00090 0.20 -0.0 26,291 - HSERO_RS00090 0.20 +0.2
Or see this region's nucleotide sequence