Experiment: Tween 20 (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_30330 and AO356_30335 are separated by 423 nucleotides AO356_30335 and AO356_30340 are separated by 172 nucleotides
AO356_30330: AO356_30330 - 2-hydroxy-3-oxopropionate reductase, at 7,078,216 to 7,079,550
_30330
AO356_30335: AO356_30335 - MFS transporter, at 7,079,974 to 7,081,344
_30335
AO356_30340: AO356_30340 - chemotaxis protein, at 7,081,517 to 7,083,469
_30340
Position (kb) 7079
7080
7081
7082 Strain fitness (log2 ratio) -2
-1
0
1
2 at 7079.089 kb on + strand, within AO356_30330 at 7079.090 kb on - strand, within AO356_30330 at 7079.090 kb on - strand, within AO356_30330 at 7079.187 kb on - strand, within AO356_30330 at 7079.187 kb on - strand, within AO356_30330 at 7079.203 kb on + strand, within AO356_30330 at 7079.204 kb on - strand, within AO356_30330 at 7079.204 kb on - strand, within AO356_30330 at 7079.204 kb on - strand, within AO356_30330 at 7079.301 kb on + strand, within AO356_30330 at 7079.305 kb on + strand, within AO356_30330 at 7079.306 kb on - strand, within AO356_30330 at 7079.500 kb on + strand at 7079.500 kb on + strand at 7079.500 kb on + strand at 7079.508 kb on + strand at 7079.592 kb on + strand at 7079.592 kb on + strand at 7079.592 kb on + strand at 7079.592 kb on + strand at 7079.593 kb on - strand at 7079.701 kb on - strand at 7079.710 kb on + strand at 7079.755 kb on + strand at 7079.760 kb on + strand at 7079.761 kb on - strand at 7079.761 kb on - strand at 7079.811 kb on - strand at 7079.811 kb on - strand at 7079.851 kb on + strand at 7079.852 kb on - strand at 7079.877 kb on - strand at 7079.941 kb on + strand at 7079.942 kb on - strand at 7079.945 kb on - strand at 7080.145 kb on + strand, within AO356_30335 at 7080.254 kb on + strand, within AO356_30335 at 7080.286 kb on + strand, within AO356_30335 at 7080.286 kb on + strand, within AO356_30335 at 7080.286 kb on + strand, within AO356_30335 at 7080.286 kb on + strand, within AO356_30335 at 7080.286 kb on + strand, within AO356_30335 at 7080.382 kb on + strand, within AO356_30335 at 7080.383 kb on - strand, within AO356_30335 at 7080.383 kb on - strand, within AO356_30335 at 7080.383 kb on - strand, within AO356_30335 at 7080.383 kb on - strand, within AO356_30335 at 7080.383 kb on - strand, within AO356_30335 at 7080.383 kb on - strand, within AO356_30335 at 7080.610 kb on + strand, within AO356_30335 at 7080.611 kb on - strand, within AO356_30335 at 7080.611 kb on - strand, within AO356_30335 at 7080.634 kb on - strand, within AO356_30335 at 7080.696 kb on + strand, within AO356_30335 at 7080.696 kb on + strand, within AO356_30335 at 7080.697 kb on - strand, within AO356_30335 at 7080.697 kb on - strand, within AO356_30335 at 7080.697 kb on - strand, within AO356_30335 at 7080.742 kb on + strand, within AO356_30335 at 7080.742 kb on + strand, within AO356_30335 at 7080.742 kb on + strand, within AO356_30335 at 7080.746 kb on + strand, within AO356_30335 at 7080.746 kb on + strand, within AO356_30335 at 7080.747 kb on - strand, within AO356_30335 at 7080.747 kb on - strand, within AO356_30335 at 7080.747 kb on - strand, within AO356_30335 at 7080.760 kb on - strand, within AO356_30335 at 7080.760 kb on - strand, within AO356_30335 at 7080.760 kb on - strand, within AO356_30335 at 7080.763 kb on + strand, within AO356_30335 at 7080.763 kb on + strand, within AO356_30335 at 7080.764 kb on - strand, within AO356_30335 at 7080.836 kb on + strand, within AO356_30335 at 7080.837 kb on - strand, within AO356_30335 at 7080.848 kb on + strand, within AO356_30335 at 7080.848 kb on + strand, within AO356_30335 at 7080.848 kb on + strand, within AO356_30335 at 7080.858 kb on - strand, within AO356_30335 at 7080.866 kb on + strand, within AO356_30335 at 7080.867 kb on - strand, within AO356_30335 at 7080.897 kb on - strand, within AO356_30335 at 7080.946 kb on + strand, within AO356_30335 at 7080.946 kb on + strand, within AO356_30335 at 7080.946 kb on + strand, within AO356_30335 at 7080.946 kb on + strand, within AO356_30335 at 7080.947 kb on - strand, within AO356_30335 at 7080.947 kb on - strand, within AO356_30335 at 7080.947 kb on - strand, within AO356_30335 at 7081.019 kb on - strand, within AO356_30335 at 7081.019 kb on - strand, within AO356_30335 at 7081.019 kb on - strand, within AO356_30335 at 7081.094 kb on - strand, within AO356_30335 at 7081.145 kb on - strand, within AO356_30335 at 7081.145 kb on - strand, within AO356_30335 at 7081.186 kb on + strand, within AO356_30335 at 7081.186 kb on + strand, within AO356_30335 at 7081.250 kb on + strand at 7081.339 kb on - strand at 7081.339 kb on - strand at 7081.339 kb on - strand at 7081.339 kb on - strand at 7081.342 kb on + strand at 7081.343 kb on - strand at 7081.467 kb on - strand at 7081.504 kb on + strand at 7081.513 kb on - strand at 7081.513 kb on - strand at 7081.516 kb on + strand at 7081.516 kb on + strand at 7081.516 kb on + strand at 7081.517 kb on - strand at 7081.524 kb on + strand at 7081.551 kb on + strand at 7081.566 kb on + strand at 7081.642 kb on + strand at 7081.653 kb on + strand at 7081.733 kb on + strand, within AO356_30340 at 7081.733 kb on + strand, within AO356_30340 at 7081.733 kb on + strand, within AO356_30340 at 7081.734 kb on - strand, within AO356_30340 at 7081.833 kb on - strand, within AO356_30340 at 7081.925 kb on + strand, within AO356_30340 at 7081.925 kb on + strand, within AO356_30340 at 7081.926 kb on - strand, within AO356_30340 at 7081.949 kb on + strand, within AO356_30340 at 7081.949 kb on + strand, within AO356_30340 at 7081.950 kb on - strand, within AO356_30340 at 7082.009 kb on + strand, within AO356_30340 at 7082.009 kb on + strand, within AO356_30340 at 7082.009 kb on + strand, within AO356_30340 at 7082.010 kb on - strand, within AO356_30340 at 7082.091 kb on + strand, within AO356_30340 at 7082.138 kb on - strand, within AO356_30340 at 7082.160 kb on - strand, within AO356_30340 at 7082.160 kb on - strand, within AO356_30340 at 7082.187 kb on + strand, within AO356_30340 at 7082.188 kb on - strand, within AO356_30340 at 7082.193 kb on + strand, within AO356_30340 at 7082.193 kb on + strand, within AO356_30340 at 7082.193 kb on + strand, within AO356_30340 at 7082.215 kb on + strand, within AO356_30340 at 7082.215 kb on + strand, within AO356_30340 at 7082.216 kb on - strand, within AO356_30340 at 7082.250 kb on - strand, within AO356_30340 at 7082.309 kb on + strand, within AO356_30340 at 7082.309 kb on + strand, within AO356_30340 at 7082.309 kb on + strand, within AO356_30340 at 7082.309 kb on + strand, within AO356_30340 at 7082.310 kb on - strand, within AO356_30340 at 7082.310 kb on - strand, within AO356_30340 at 7082.310 kb on - strand, within AO356_30340 at 7082.310 kb on - strand, within AO356_30340
Per-strain Table
Position Strand Gene LocusTag Fraction Tween 20 (C) remove 7,079,089 + AO356_30330 0.65 -0.3 7,079,090 - AO356_30330 0.65 +0.4 7,079,090 - AO356_30330 0.65 -0.7 7,079,187 - AO356_30330 0.73 +1.6 7,079,187 - AO356_30330 0.73 -0.0 7,079,203 + AO356_30330 0.74 +0.4 7,079,204 - AO356_30330 0.74 -2.1 7,079,204 - AO356_30330 0.74 +0.4 7,079,204 - AO356_30330 0.74 -0.6 7,079,301 + AO356_30330 0.81 +0.8 7,079,305 + AO356_30330 0.82 +0.3 7,079,306 - AO356_30330 0.82 +0.6 7,079,500 + +0.4 7,079,500 + +0.8 7,079,500 + +0.1 7,079,508 + +1.4 7,079,592 + +1.4 7,079,592 + -0.5 7,079,592 + +0.3 7,079,592 + +0.1 7,079,593 - +0.1 7,079,701 - +0.2 7,079,710 + +0.8 7,079,755 + +2.6 7,079,760 + +0.4 7,079,761 - -0.8 7,079,761 - +0.3 7,079,811 - -0.2 7,079,811 - +0.3 7,079,851 + -0.0 7,079,852 - +0.4 7,079,877 - -0.8 7,079,941 + +0.8 7,079,942 - -0.4 7,079,945 - -0.1 7,080,145 + AO356_30335 0.12 +0.1 7,080,254 + AO356_30335 0.20 -0.4 7,080,286 + AO356_30335 0.23 +0.2 7,080,286 + AO356_30335 0.23 -0.1 7,080,286 + AO356_30335 0.23 +0.4 7,080,286 + AO356_30335 0.23 -0.5 7,080,286 + AO356_30335 0.23 +0.2 7,080,382 + AO356_30335 0.30 +0.3 7,080,383 - AO356_30335 0.30 +0.3 7,080,383 - AO356_30335 0.30 +0.2 7,080,383 - AO356_30335 0.30 -0.2 7,080,383 - AO356_30335 0.30 +0.1 7,080,383 - AO356_30335 0.30 -1.6 7,080,383 - AO356_30335 0.30 -0.6 7,080,610 + AO356_30335 0.46 +1.0 7,080,611 - AO356_30335 0.46 -0.7 7,080,611 - AO356_30335 0.46 +0.4 7,080,634 - AO356_30335 0.48 +0.8 7,080,696 + AO356_30335 0.53 +0.2 7,080,696 + AO356_30335 0.53 +0.1 7,080,697 - AO356_30335 0.53 -0.1 7,080,697 - AO356_30335 0.53 +0.6 7,080,697 - AO356_30335 0.53 -0.7 7,080,742 + AO356_30335 0.56 -0.8 7,080,742 + AO356_30335 0.56 +0.0 7,080,742 + AO356_30335 0.56 -0.1 7,080,746 + AO356_30335 0.56 -0.4 7,080,746 + AO356_30335 0.56 -1.3 7,080,747 - AO356_30335 0.56 +1.1 7,080,747 - AO356_30335 0.56 -0.0 7,080,747 - AO356_30335 0.56 +0.3 7,080,760 - AO356_30335 0.57 +0.1 7,080,760 - AO356_30335 0.57 -0.0 7,080,760 - AO356_30335 0.57 -0.3 7,080,763 + AO356_30335 0.58 +0.0 7,080,763 + AO356_30335 0.58 +0.3 7,080,764 - AO356_30335 0.58 -0.6 7,080,836 + AO356_30335 0.63 -0.5 7,080,837 - AO356_30335 0.63 -1.1 7,080,848 + AO356_30335 0.64 +0.4 7,080,848 + AO356_30335 0.64 -0.8 7,080,848 + AO356_30335 0.64 -0.4 7,080,858 - AO356_30335 0.64 -1.2 7,080,866 + AO356_30335 0.65 +0.0 7,080,867 - AO356_30335 0.65 +1.2 7,080,897 - AO356_30335 0.67 -0.6 7,080,946 + AO356_30335 0.71 +0.5 7,080,946 + AO356_30335 0.71 -0.4 7,080,946 + AO356_30335 0.71 -0.9 7,080,946 + AO356_30335 0.71 -0.1 7,080,947 - AO356_30335 0.71 +0.6 7,080,947 - AO356_30335 0.71 -0.9 7,080,947 - AO356_30335 0.71 +0.1 7,081,019 - AO356_30335 0.76 +0.1 7,081,019 - AO356_30335 0.76 +0.4 7,081,019 - AO356_30335 0.76 -0.1 7,081,094 - AO356_30335 0.82 +0.7 7,081,145 - AO356_30335 0.85 +1.2 7,081,145 - AO356_30335 0.85 -1.9 7,081,186 + AO356_30335 0.88 +0.9 7,081,186 + AO356_30335 0.88 -0.6 7,081,250 + -1.1 7,081,339 - +0.1 7,081,339 - -0.3 7,081,339 - -0.2 7,081,339 - +0.1 7,081,342 + +0.1 7,081,343 - +0.2 7,081,467 - +1.1 7,081,504 + -0.0 7,081,513 - +0.2 7,081,513 - +0.4 7,081,516 + -1.9 7,081,516 + -0.2 7,081,516 + -0.1 7,081,517 - +0.1 7,081,524 + +0.2 7,081,551 + +0.3 7,081,566 + -2.6 7,081,642 + +0.5 7,081,653 + +0.6 7,081,733 + AO356_30340 0.11 +0.2 7,081,733 + AO356_30340 0.11 +0.4 7,081,733 + AO356_30340 0.11 +0.4 7,081,734 - AO356_30340 0.11 -0.0 7,081,833 - AO356_30340 0.16 -0.2 7,081,925 + AO356_30340 0.21 -0.5 7,081,925 + AO356_30340 0.21 +0.3 7,081,926 - AO356_30340 0.21 -0.3 7,081,949 + AO356_30340 0.22 -0.2 7,081,949 + AO356_30340 0.22 -0.3 7,081,950 - AO356_30340 0.22 +0.5 7,082,009 + AO356_30340 0.25 +0.8 7,082,009 + AO356_30340 0.25 +0.6 7,082,009 + AO356_30340 0.25 -0.2 7,082,010 - AO356_30340 0.25 -0.4 7,082,091 + AO356_30340 0.29 -0.1 7,082,138 - AO356_30340 0.32 -1.0 7,082,160 - AO356_30340 0.33 +0.7 7,082,160 - AO356_30340 0.33 -0.7 7,082,187 + AO356_30340 0.34 +0.4 7,082,188 - AO356_30340 0.34 +0.1 7,082,193 + AO356_30340 0.35 -0.6 7,082,193 + AO356_30340 0.35 +0.2 7,082,193 + AO356_30340 0.35 +1.0 7,082,215 + AO356_30340 0.36 +0.6 7,082,215 + AO356_30340 0.36 -0.2 7,082,216 - AO356_30340 0.36 -0.1 7,082,250 - AO356_30340 0.38 +0.4 7,082,309 + AO356_30340 0.41 +0.4 7,082,309 + AO356_30340 0.41 -0.6 7,082,309 + AO356_30340 0.41 -0.0 7,082,309 + AO356_30340 0.41 +0.7 7,082,310 - AO356_30340 0.41 +0.2 7,082,310 - AO356_30340 0.41 -0.4 7,082,310 - AO356_30340 0.41 -0.4 7,082,310 - AO356_30340 0.41 -0.2
Or see this region's nucleotide sequence