Strain Fitness in Sinorhizobium meliloti 1021 around SMc02705

Experiment: LB, pH8

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSMc02703 and SMc02704 are separated by 3 nucleotidesSMc02704 and SMc02705 overlap by 4 nucleotidesSMc02705 and SMc02706 are separated by 10 nucleotides SMc02703: SMc02703 - hypothetical protein, at 2,550,908 to 2,551,921 SMc02703 SMc02704: SMc02704 - hypothetical protein, at 2,551,925 to 2,552,845 SMc02704 SMc02705: SMc02705 - hypothetical protein, at 2,552,842 to 2,555,655 SMc02705 SMc02706: SMc02706 - hypothetical protein, at 2,555,666 to 2,557,735 SMc02706 Position (kb) 2552 2553 2554 2555 2556Strain fitness (log2 ratio) -1 0 1at 2552.794 kb on + strandat 2552.794 kb on + strandat 2552.794 kb on + strandat 2552.794 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction LB, pH8
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2,552,794 + +0.2
2,552,794 + +0.8
2,552,794 + +0.1
2,552,794 + +0.4

Or see this region's nucleotide sequence