Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS11145

Experiment: R2A with Zinc chloride 0.625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Zinc chloride 0.625 mM
2,473,194	+		LRK54_RS11140	0.13	-0.5
2,473,194	+		LRK54_RS11140	0.13	-1.1
2,473,194	+		LRK54_RS11140	0.13	+0.2
2,473,255	+		LRK54_RS11140	0.19	-1.4
2,473,255	+		LRK54_RS11140	0.19	-2.8
2,473,255	+		LRK54_RS11140	0.19	-0.5
2,473,255	+		LRK54_RS11140	0.19	-1.6
2,473,256	-		LRK54_RS11140	0.19	-1.6
2,473,256	-		LRK54_RS11140	0.19	+0.6
2,473,256	-		LRK54_RS11140	0.19	-0.6
2,473,256	-		LRK54_RS11140	0.19	-1.4
2,473,256	-		LRK54_RS11140	0.19	+0.0
2,473,256	-		LRK54_RS11140	0.19	-0.1
2,473,256	-		LRK54_RS11140	0.19	-0.6
2,473,256	-		LRK54_RS11140	0.19	-2.8
2,473,720	+		LRK54_RS11140	0.70	-1.9
2,473,720	+		LRK54_RS11140	0.70	-0.7
2,473,720	+		LRK54_RS11140	0.70	-1.0
2,473,720	+		LRK54_RS11140	0.70	-0.8
2,473,720	+		LRK54_RS11140	0.70	-1.1
2,473,720	+		LRK54_RS11140	0.70	-0.2
2,473,720	+		LRK54_RS11140	0.70	-1.8
2,473,720	+		LRK54_RS11140	0.70	-0.4
2,473,720	+		LRK54_RS11140	0.70	-1.0
2,473,720	+		LRK54_RS11140	0.70	-1.3
2,473,720	+		LRK54_RS11140	0.70	-2.3
2,473,720	+		LRK54_RS11140	0.70	-0.9
2,473,720	+		LRK54_RS11140	0.70	-1.9
2,473,720	+		LRK54_RS11140	0.70	-0.6
2,473,720	+		LRK54_RS11140	0.70	-3.3
2,473,720	+		LRK54_RS11140	0.70	-0.1
2,473,720	+		LRK54_RS11140	0.70	+0.1
2,473,720	+		LRK54_RS11140	0.70	-1.8
2,473,720	+		LRK54_RS11140	0.70	-0.1
2,473,720	+		LRK54_RS11140	0.70	-1.9
2,473,721	-		LRK54_RS11140	0.70	-2.2
2,473,721	-		LRK54_RS11140	0.70	-2.8
2,473,721	-		LRK54_RS11140	0.70	+0.3
2,473,721	-		LRK54_RS11140	0.70	-2.5
2,473,721	-		LRK54_RS11140	0.70	-0.2
2,473,721	-		LRK54_RS11140	0.70	-0.6
2,473,721	-		LRK54_RS11140	0.70	-1.6
2,473,721	-		LRK54_RS11140	0.70	-1.1
2,473,721	-		LRK54_RS11140	0.70	-3.0
2,473,721	-		LRK54_RS11140	0.70	-1.4
2,473,721	-		LRK54_RS11140	0.70	-1.0
2,473,721	-		LRK54_RS11140	0.70	+0.3
2,473,721	-		LRK54_RS11140	0.70	-2.3
2,473,721	-		LRK54_RS11140	0.70	-0.6
2,473,721	-		LRK54_RS11140	0.70	-1.9
2,473,721	-		LRK54_RS11140	0.70	-0.3
2,473,721	-		LRK54_RS11140	0.70	-1.8
2,473,721	-		LRK54_RS11140	0.70	-1.5
2,473,721	-		LRK54_RS11140	0.70	-0.6
2,473,768	+		LRK54_RS11140	0.75	-2.2
2,473,768	+		LRK54_RS11140	0.75	-1.4
2,473,768	+		LRK54_RS11140	0.75	-2.0
2,473,768	+		LRK54_RS11140	0.75	-0.1
2,473,768	+		LRK54_RS11140	0.75	+1.2
2,473,768	+		LRK54_RS11140	0.75	-2.9
2,473,768	+		LRK54_RS11140	0.75	-2.4
2,473,768	+		LRK54_RS11140	0.75	-0.1
2,473,768	+		LRK54_RS11140	0.75	-1.5
2,473,768	+		LRK54_RS11140	0.75	-3.0
2,473,768	+		LRK54_RS11140	0.75	-2.9
2,473,768	+		LRK54_RS11140	0.75	+0.6
2,473,768	+		LRK54_RS11140	0.75	-0.7
2,473,768	+		LRK54_RS11140	0.75	-2.3
2,473,768	+		LRK54_RS11140	0.75	-0.5
2,473,768	+		LRK54_RS11140	0.75	-0.1
2,473,768	+		LRK54_RS11140	0.75	-1.5
2,473,768	+		LRK54_RS11140	0.75	+0.2
2,473,768	+		LRK54_RS11140	0.75	-0.6
2,473,768	+		LRK54_RS11140	0.75	-1.8
2,473,768	+		LRK54_RS11140	0.75	-1.1
2,473,768	+		LRK54_RS11140	0.75	+0.6
2,473,768	+		LRK54_RS11140	0.75	-2.5
2,473,769	-		LRK54_RS11140	0.75	-1.3
2,473,769	-		LRK54_RS11140	0.75	-0.9
2,473,769	-		LRK54_RS11140	0.75	-1.2
2,473,769	-		LRK54_RS11140	0.75	-1.3
2,473,769	-		LRK54_RS11140	0.75	+0.4
2,473,769	-		LRK54_RS11140	0.75	+0.4
2,473,769	-		LRK54_RS11140	0.75	-1.2
2,473,769	-		LRK54_RS11140	0.75	-1.0
2,473,769	-		LRK54_RS11140	0.75	-1.3
2,473,769	-		LRK54_RS11140	0.75	-0.7
2,473,769	-		LRK54_RS11140	0.75	-2.4
2,473,769	-		LRK54_RS11140	0.75	-1.6
2,473,769	-		LRK54_RS11140	0.75	-1.0
2,473,769	-		LRK54_RS11140	0.75	+0.4
2,473,769	-		LRK54_RS11140	0.75	-1.4
2,473,769	-		LRK54_RS11140	0.75	-0.6
2,473,769	-		LRK54_RS11140	0.75	-1.4
2,473,769	-		LRK54_RS11140	0.75	+0.2
2,473,769	-		LRK54_RS11140	0.75	-1.1
2,473,769	-		LRK54_RS11140	0.75	-0.8
2,473,769	-		LRK54_RS11140	0.75	-1.1
2,473,798	+		LRK54_RS11140	0.78	-1.0
2,473,799	-		LRK54_RS11140	0.78	+0.2
2,473,852	+		LRK54_RS11140	0.84	-0.4
2,473,852	+		LRK54_RS11140	0.84	-1.4
2,473,852	+		LRK54_RS11140	0.84	-1.3
2,473,852	+		LRK54_RS11140	0.84	-2.0
2,473,853	-		LRK54_RS11140	0.84	-0.1
2,473,853	-		LRK54_RS11140	0.84	-0.8
2,473,853	-		LRK54_RS11140	0.84	-0.1
2,473,853	-		LRK54_RS11140	0.84	-1.5
2,473,853	-		LRK54_RS11140	0.84	-0.3
2,473,853	-		LRK54_RS11140	0.84	-1.7
2,473,853	-		LRK54_RS11140	0.84	+1.2
2,473,970	+				-0.8
2,473,970	+				+0.7
2,473,970	+				-1.2
2,473,970	+				+1.2
2,473,971	-				-0.8
2,473,971	-				-2.3
2,473,971	-				-1.6
2,474,006	+				-2.4
2,474,006	+				-0.8
2,474,006	+				-1.4
2,474,006	+				-1.0
2,474,007	-				-3.1
2,474,007	-				-0.4
2,474,007	-				-0.7
2,474,007	-				-1.0
2,474,007	-				-0.8
2,474,007	-				+0.5
2,474,007	-				+1.2
2,474,028	+				-1.6
2,474,028	+				-0.3
2,474,028	+				-0.3
2,474,028	+				+0.2
2,474,028	+				-2.4
2,474,028	+				-0.1
2,474,028	+				-1.1
2,474,028	+				+1.0
2,474,028	+				-1.0
2,474,028	+				-1.0
2,474,028	+				-0.3
2,474,028	+				-0.9
2,474,028	+				-0.1
2,474,028	+				-0.7
2,474,029	-				-0.8
2,474,029	-				-0.4
2,474,029	-				-0.7
2,474,029	-				+2.2
2,474,029	-				-1.4
2,474,029	-				-1.7
2,474,029	-				-0.2
2,474,029	-				+0.0
2,474,029	-				-0.6
2,474,029	-				+1.6
2,474,033	+				-0.8
2,474,033	+				-0.4
2,474,033	+				+0.9
2,474,033	+				+0.7
2,474,033	+				+0.4
2,474,033	+				-0.3
2,474,033	+				+0.6
2,474,033	+				+0.1
2,474,033	+				-1.2
2,474,033	+				+0.3
2,474,033	+				-0.4
2,474,033	+				+0.2
2,474,033	+				+0.0
2,474,033	+				+2.2
2,474,033	+				+1.2
2,474,034	-				+0.5
2,474,034	-				-0.8
2,474,034	-				+0.1
2,474,034	-				+0.1
2,474,034	-				+0.9
2,474,034	-				+0.9
2,474,034	-				-1.0
2,474,034	-				+0.0
2,474,034	-				-0.4
2,474,034	-				-0.1
2,474,034	-				-0.9
2,474,034	-				-0.0
2,474,034	-				-0.4
2,474,238	+		LRK54_RS11145	0.18	+0.2
2,474,291	+		LRK54_RS11145	0.24	-1.7
2,474,291	+		LRK54_RS11145	0.24	+0.4
2,474,291	+		LRK54_RS11145	0.24	-0.4
2,474,291	+		LRK54_RS11145	0.24	-0.6
2,474,291	+		LRK54_RS11145	0.24	+0.6
2,474,291	+		LRK54_RS11145	0.24	-0.3
2,474,291	+		LRK54_RS11145	0.24	-0.2
2,474,291	+		LRK54_RS11145	0.24	+1.6
2,474,292	-		LRK54_RS11145	0.24	-0.5
2,474,292	-		LRK54_RS11145	0.24	+0.2
2,474,292	-		LRK54_RS11145	0.24	+0.9
2,474,292	-		LRK54_RS11145	0.24	-0.2
2,474,292	-		LRK54_RS11145	0.24	+0.5
2,474,292	-		LRK54_RS11145	0.24	+2.2
2,474,292	-		LRK54_RS11145	0.24	-0.3
2,474,292	-		LRK54_RS11145	0.24	-0.6
2,474,292	-		LRK54_RS11145	0.24	-0.5
2,474,292	-		LRK54_RS11145	0.24	-1.3
2,474,292	-		LRK54_RS11145	0.24	-0.7
2,474,393	+		LRK54_RS11145	0.36	-1.0
2,474,394	-		LRK54_RS11145	0.36	-1.2
2,474,404	-		LRK54_RS11145	0.37	+0.6
2,474,404	-		LRK54_RS11145	0.37	-0.6
2,474,404	-		LRK54_RS11145	0.37	-0.7
2,474,404	-		LRK54_RS11145	0.37	+0.4
2,474,405	+		LRK54_RS11145	0.38	+0.3
2,474,405	+		LRK54_RS11145	0.38	+0.5
2,474,405	+		LRK54_RS11145	0.38	+0.2
2,474,405	+		LRK54_RS11145	0.38	-0.7
2,474,405	+		LRK54_RS11145	0.38	-0.3
2,474,405	+		LRK54_RS11145	0.38	+1.4
2,474,405	+		LRK54_RS11145	0.38	+0.1
2,474,405	+		LRK54_RS11145	0.38	+0.2
2,474,405	+		LRK54_RS11145	0.38	+0.2
2,474,405	+		LRK54_RS11145	0.38	-0.3
2,474,405	+		LRK54_RS11145	0.38	-0.1
2,474,405	+		LRK54_RS11145	0.38	-1.3
2,474,405	+		LRK54_RS11145	0.38	+0.1
2,474,405	+		LRK54_RS11145	0.38	+0.6
2,474,405	+		LRK54_RS11145	0.38	-0.4
2,474,405	+		LRK54_RS11145	0.38	-0.4
2,474,405	+		LRK54_RS11145	0.38	+0.2
2,474,405	+		LRK54_RS11145	0.38	-0.7
2,474,405	+		LRK54_RS11145	0.38	+0.3
2,474,405	+		LRK54_RS11145	0.38	+0.0
2,474,405	+		LRK54_RS11145	0.38	+1.3
2,474,406	-		LRK54_RS11145	0.38	+0.3
2,474,406	-		LRK54_RS11145	0.38	-1.3
2,474,406	-		LRK54_RS11145	0.38	+0.1
2,474,406	-		LRK54_RS11145	0.38	-0.1
2,474,406	-		LRK54_RS11145	0.38	-0.1
2,474,406	-		LRK54_RS11145	0.38	+0.5
2,474,406	-		LRK54_RS11145	0.38	-0.2
2,474,406	-		LRK54_RS11145	0.38	-1.7
2,474,406	-		LRK54_RS11145	0.38	-1.8
2,474,406	-		LRK54_RS11145	0.38	-0.8
2,474,406	-		LRK54_RS11145	0.38	-0.4
2,474,406	-		LRK54_RS11145	0.38	+0.2
2,474,406	-		LRK54_RS11145	0.38	+2.1
2,474,406	-		LRK54_RS11145	0.38	-1.0
2,474,406	-		LRK54_RS11145	0.38	-1.0
2,474,406	-		LRK54_RS11145	0.38	-0.1
2,474,406	-		LRK54_RS11145	0.38	+0.2
2,474,406	-		LRK54_RS11145	0.38	-0.6
2,474,406	-		LRK54_RS11145	0.38	-1.0
2,474,406	-		LRK54_RS11145	0.38	-0.0
2,474,406	-		LRK54_RS11145	0.38	-0.2
2,474,406	-		LRK54_RS11145	0.38	-0.5
2,474,406	-		LRK54_RS11145	0.38	-1.1
2,474,406	-		LRK54_RS11145	0.38	+0.6
2,474,456	+		LRK54_RS11145	0.43	+0.3
2,474,456	+		LRK54_RS11145	0.43	-0.0
2,474,456	+		LRK54_RS11145	0.43	-0.6
2,474,456	+		LRK54_RS11145	0.43	-0.1
2,474,456	+		LRK54_RS11145	0.43	+0.7
2,474,456	+		LRK54_RS11145	0.43	-1.7
2,474,457	-		LRK54_RS11145	0.44	-0.1
2,474,457	-		LRK54_RS11145	0.44	-2.4
2,474,457	-		LRK54_RS11145	0.44	-0.1
2,474,457	-		LRK54_RS11145	0.44	-0.2
2,474,457	-		LRK54_RS11145	0.44	-0.4
2,474,457	-		LRK54_RS11145	0.44	+0.7
2,474,457	-		LRK54_RS11145	0.44	-0.6
2,474,705	+		LRK54_RS11145	0.72	+0.1
2,474,705	+		LRK54_RS11145	0.72	-0.3
2,474,705	+		LRK54_RS11145	0.72	-0.7
2,474,705	+		LRK54_RS11145	0.72	-0.8
2,474,705	+		LRK54_RS11145	0.72	+0.2
2,474,705	+		LRK54_RS11145	0.72	-0.9
2,474,705	+		LRK54_RS11145	0.72	-0.9
2,474,705	+		LRK54_RS11145	0.72	-0.0
2,474,705	+		LRK54_RS11145	0.72	-1.0
2,474,705	+		LRK54_RS11145	0.72	+0.0
2,474,705	+		LRK54_RS11145	0.72	+0.8
2,474,705	+		LRK54_RS11145	0.72	+0.0
2,474,705	+		LRK54_RS11145	0.72	-1.3
2,474,705	+		LRK54_RS11145	0.72	+0.6
2,474,705	+		LRK54_RS11145	0.72	+0.7
2,474,705	+		LRK54_RS11145	0.72	-0.3
2,474,705	+		LRK54_RS11145	0.72	+0.4
2,474,705	+		LRK54_RS11145	0.72	-0.7
2,474,705	+		LRK54_RS11145	0.72	-0.3
2,474,705	+		LRK54_RS11145	0.72	+0.2
2,474,705	+		LRK54_RS11145	0.72	+0.2
2,474,705	+		LRK54_RS11145	0.72	-0.7
2,474,705	+		LRK54_RS11145	0.72	+0.6
2,474,705	+		LRK54_RS11145	0.72	+0.0
2,474,705	+		LRK54_RS11145	0.72	+1.8
2,474,705	+		LRK54_RS11145	0.72	-0.4
2,474,705	+		LRK54_RS11145	0.72	+0.5
2,474,705	+		LRK54_RS11145	0.72	-1.9
2,474,705	+		LRK54_RS11145	0.72	-0.2
2,474,705	+		LRK54_RS11145	0.72	-0.1
2,474,705	+		LRK54_RS11145	0.72	-0.6
2,474,705	+		LRK54_RS11145	0.72	-0.9
2,474,705	+		LRK54_RS11145	0.72	-0.1
2,474,705	+		LRK54_RS11145	0.72	-1.0
2,474,705	+		LRK54_RS11145	0.72	+0.5
2,474,705	+		LRK54_RS11145	0.72	-0.5
2,474,706	-		LRK54_RS11145	0.73	+0.1
2,474,706	-		LRK54_RS11145	0.73	+0.3
2,474,706	-		LRK54_RS11145	0.73	+0.4
2,474,706	-		LRK54_RS11145	0.73	-0.1
2,474,706	-		LRK54_RS11145	0.73	-0.7
2,474,706	-		LRK54_RS11145	0.73	-0.5
2,474,706	-		LRK54_RS11145	0.73	+0.6
2,474,706	-		LRK54_RS11145	0.73	-0.1
2,474,706	-		LRK54_RS11145	0.73	-0.4
2,474,706	-		LRK54_RS11145	0.73	-0.3
2,474,706	-		LRK54_RS11145	0.73	-1.3
2,474,706	-		LRK54_RS11145	0.73	-0.8
2,474,706	-		LRK54_RS11145	0.73	+0.2
2,474,706	-		LRK54_RS11145	0.73	-0.4
2,474,706	-		LRK54_RS11145	0.73	+0.1
2,474,706	-		LRK54_RS11145	0.73	-0.1
2,474,706	-		LRK54_RS11145	0.73	+0.1
2,474,706	-		LRK54_RS11145	0.73	-0.2
2,474,706	-		LRK54_RS11145	0.73	+0.7
2,474,706	-		LRK54_RS11145	0.73	-0.7
2,474,706	-		LRK54_RS11145	0.73	+0.9
2,474,706	-		LRK54_RS11145	0.73	-0.4
2,474,706	-		LRK54_RS11145	0.73	-0.1
2,474,706	-		LRK54_RS11145	0.73	-0.2
2,474,706	-		LRK54_RS11145	0.73	-0.5
2,474,706	-		LRK54_RS11145	0.73	-2.1
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