Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS18660 and ABZR87_RS18665 are separated by 68 nucleotides ABZR87_RS18665 and ABZR87_RS18670 are separated by 33 nucleotides
ABZR87_RS18660: ABZR87_RS18660 - xylulokinase, at 538,949 to 540,457
_RS18660
ABZR87_RS18665: ABZR87_RS18665 - D-arabinitol 4-dehydrogenase, at 540,526 to 541,944
_RS18665
ABZR87_RS18670: ABZR87_RS18670 - ABC transporter ATP-binding protein, at 541,978 to 543,096
_RS18670
Position (kb) 540
541
542 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 539.768 kb on + strand, within ABZR87_RS18660 at 539.905 kb on + strand, within ABZR87_RS18660 at 539.905 kb on + strand, within ABZR87_RS18660 at 539.905 kb on + strand, within ABZR87_RS18660 at 539.905 kb on + strand, within ABZR87_RS18660 at 539.905 kb on + strand, within ABZR87_RS18660 at 539.906 kb on - strand, within ABZR87_RS18660 at 539.906 kb on - strand, within ABZR87_RS18660 at 539.906 kb on - strand, within ABZR87_RS18660 at 539.906 kb on - strand, within ABZR87_RS18660 at 539.989 kb on - strand, within ABZR87_RS18660 at 539.989 kb on - strand, within ABZR87_RS18660 at 539.989 kb on - strand, within ABZR87_RS18660 at 540.360 kb on - strand at 540.453 kb on + strand at 540.453 kb on + strand at 540.453 kb on + strand at 540.454 kb on - strand at 540.454 kb on - strand at 540.454 kb on - strand at 540.454 kb on - strand at 540.454 kb on - strand at 540.527 kb on + strand at 540.650 kb on + strand at 540.725 kb on + strand, within ABZR87_RS18665 at 540.725 kb on + strand, within ABZR87_RS18665 at 540.726 kb on - strand, within ABZR87_RS18665 at 540.936 kb on - strand, within ABZR87_RS18665 at 541.001 kb on + strand, within ABZR87_RS18665 at 541.092 kb on + strand, within ABZR87_RS18665 at 541.092 kb on + strand, within ABZR87_RS18665 at 541.092 kb on + strand, within ABZR87_RS18665 at 541.092 kb on + strand, within ABZR87_RS18665 at 541.092 kb on + strand, within ABZR87_RS18665 at 541.093 kb on - strand, within ABZR87_RS18665 at 541.093 kb on - strand, within ABZR87_RS18665 at 541.093 kb on - strand, within ABZR87_RS18665 at 541.093 kb on - strand, within ABZR87_RS18665 at 541.093 kb on - strand, within ABZR87_RS18665 at 541.093 kb on - strand, within ABZR87_RS18665 at 541.517 kb on + strand, within ABZR87_RS18665 at 541.518 kb on - strand, within ABZR87_RS18665 at 541.518 kb on - strand, within ABZR87_RS18665 at 541.595 kb on + strand, within ABZR87_RS18665 at 541.595 kb on + strand, within ABZR87_RS18665 at 541.595 kb on + strand, within ABZR87_RS18665 at 541.595 kb on + strand, within ABZR87_RS18665 at 541.596 kb on - strand, within ABZR87_RS18665 at 541.596 kb on - strand, within ABZR87_RS18665 at 541.598 kb on + strand, within ABZR87_RS18665 at 541.718 kb on + strand, within ABZR87_RS18665 at 541.718 kb on + strand, within ABZR87_RS18665 at 541.719 kb on - strand, within ABZR87_RS18665 at 541.758 kb on - strand, within ABZR87_RS18665 at 541.826 kb on - strand at 541.868 kb on + strand at 541.868 kb on + strand at 541.868 kb on + strand at 541.869 kb on - strand at 542.168 kb on + strand, within ABZR87_RS18670 at 542.168 kb on + strand, within ABZR87_RS18670 at 542.169 kb on - strand, within ABZR87_RS18670 at 542.432 kb on + strand, within ABZR87_RS18670 at 542.432 kb on + strand, within ABZR87_RS18670 at 542.432 kb on + strand, within ABZR87_RS18670 at 542.433 kb on - strand, within ABZR87_RS18670 at 542.433 kb on - strand, within ABZR87_RS18670 at 542.531 kb on + strand, within ABZR87_RS18670 at 542.531 kb on + strand, within ABZR87_RS18670 at 542.531 kb on + strand, within ABZR87_RS18670 at 542.531 kb on + strand, within ABZR87_RS18670 at 542.532 kb on - strand, within ABZR87_RS18670 at 542.532 kb on - strand, within ABZR87_RS18670 at 542.532 kb on - strand, within ABZR87_RS18670 at 542.755 kb on + strand, within ABZR87_RS18670 at 542.837 kb on + strand, within ABZR87_RS18670 at 542.837 kb on + strand, within ABZR87_RS18670 at 542.837 kb on + strand, within ABZR87_RS18670 at 542.846 kb on + strand, within ABZR87_RS18670 at 542.884 kb on + strand, within ABZR87_RS18670
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 539,768 + ABZR87_RS18660 0.54 +0.1 539,905 + ABZR87_RS18660 0.63 +0.3 539,905 + ABZR87_RS18660 0.63 -0.5 539,905 + ABZR87_RS18660 0.63 +0.5 539,905 + ABZR87_RS18660 0.63 -0.4 539,905 + ABZR87_RS18660 0.63 +0.1 539,906 - ABZR87_RS18660 0.63 +0.4 539,906 - ABZR87_RS18660 0.63 +0.5 539,906 - ABZR87_RS18660 0.63 +0.3 539,906 - ABZR87_RS18660 0.63 -1.0 539,989 - ABZR87_RS18660 0.69 +0.4 539,989 - ABZR87_RS18660 0.69 +0.4 539,989 - ABZR87_RS18660 0.69 -0.3 540,360 - +0.3 540,453 + +1.2 540,453 + +1.3 540,453 + +0.2 540,454 - -0.1 540,454 - +0.6 540,454 - +0.9 540,454 - -1.7 540,454 - -0.4 540,527 + -0.6 540,650 + +1.5 540,725 + ABZR87_RS18665 0.14 -0.0 540,725 + ABZR87_RS18665 0.14 -1.1 540,726 - ABZR87_RS18665 0.14 +0.2 540,936 - ABZR87_RS18665 0.29 +0.8 541,001 + ABZR87_RS18665 0.33 -0.9 541,092 + ABZR87_RS18665 0.40 -0.0 541,092 + ABZR87_RS18665 0.40 -0.9 541,092 + ABZR87_RS18665 0.40 +0.1 541,092 + ABZR87_RS18665 0.40 +0.3 541,092 + ABZR87_RS18665 0.40 -0.7 541,093 - ABZR87_RS18665 0.40 +2.8 541,093 - ABZR87_RS18665 0.40 -0.2 541,093 - ABZR87_RS18665 0.40 +0.8 541,093 - ABZR87_RS18665 0.40 -0.2 541,093 - ABZR87_RS18665 0.40 -2.4 541,093 - ABZR87_RS18665 0.40 +0.5 541,517 + ABZR87_RS18665 0.70 +0.7 541,518 - ABZR87_RS18665 0.70 -0.3 541,518 - ABZR87_RS18665 0.70 -0.1 541,595 + ABZR87_RS18665 0.75 +0.1 541,595 + ABZR87_RS18665 0.75 -2.2 541,595 + ABZR87_RS18665 0.75 +0.1 541,595 + ABZR87_RS18665 0.75 +0.0 541,596 - ABZR87_RS18665 0.75 -0.6 541,596 - ABZR87_RS18665 0.75 +0.2 541,598 + ABZR87_RS18665 0.76 +0.5 541,718 + ABZR87_RS18665 0.84 +0.8 541,718 + ABZR87_RS18665 0.84 +0.3 541,719 - ABZR87_RS18665 0.84 -0.7 541,758 - ABZR87_RS18665 0.87 -0.6 541,826 - -0.2 541,868 + -0.5 541,868 + -0.5 541,868 + -0.4 541,869 - +0.2 542,168 + ABZR87_RS18670 0.17 +0.4 542,168 + ABZR87_RS18670 0.17 -0.2 542,169 - ABZR87_RS18670 0.17 -0.4 542,432 + ABZR87_RS18670 0.41 +0.2 542,432 + ABZR87_RS18670 0.41 +1.0 542,432 + ABZR87_RS18670 0.41 +0.3 542,433 - ABZR87_RS18670 0.41 +0.0 542,433 - ABZR87_RS18670 0.41 -0.6 542,531 + ABZR87_RS18670 0.49 -0.9 542,531 + ABZR87_RS18670 0.49 +1.8 542,531 + ABZR87_RS18670 0.49 -0.1 542,531 + ABZR87_RS18670 0.49 -0.2 542,532 - ABZR87_RS18670 0.50 +0.2 542,532 - ABZR87_RS18670 0.50 +1.1 542,532 - ABZR87_RS18670 0.50 +1.6 542,755 + ABZR87_RS18670 0.69 -0.8 542,837 + ABZR87_RS18670 0.77 +0.7 542,837 + ABZR87_RS18670 0.77 +0.8 542,837 + ABZR87_RS18670 0.77 +0.8 542,846 + ABZR87_RS18670 0.78 +0.9 542,884 + ABZR87_RS18670 0.81 +0.1
Or see this region's nucleotide sequence