Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS11685 and ABZR87_RS11690 are separated by 31 nucleotides ABZR87_RS11690 and ABZR87_RS11695 are separated by 240 nucleotides
ABZR87_RS11685: ABZR87_RS11685 - CaiB/BaiF CoA-transferase family protein, at 2,475,640 to 2,476,746
_RS11685
ABZR87_RS11690: ABZR87_RS11690 - ATP-binding cassette domain-containing protein, at 2,476,778 to 2,478,715
_RS11690
ABZR87_RS11695: ABZR87_RS11695 - MurR/RpiR family transcriptional regulator, at 2,478,956 to 2,479,945
_RS11695
Position (kb)
2476
2477
2478
2479 Strain fitness (log2 ratio)
-1
0
1
2 at 2475.990 kb on - strand, within ABZR87_RS11685 at 2475.991 kb on + strand, within ABZR87_RS11685 at 2475.991 kb on + strand, within ABZR87_RS11685 at 2475.991 kb on + strand, within ABZR87_RS11685 at 2475.992 kb on - strand, within ABZR87_RS11685 at 2475.992 kb on - strand, within ABZR87_RS11685 at 2475.992 kb on - strand, within ABZR87_RS11685 at 2476.111 kb on + strand, within ABZR87_RS11685 at 2476.111 kb on + strand, within ABZR87_RS11685 at 2476.111 kb on + strand, within ABZR87_RS11685 at 2476.112 kb on - strand, within ABZR87_RS11685 at 2476.112 kb on - strand, within ABZR87_RS11685 at 2476.280 kb on + strand, within ABZR87_RS11685 at 2476.280 kb on + strand, within ABZR87_RS11685 at 2476.280 kb on + strand, within ABZR87_RS11685 at 2476.281 kb on - strand, within ABZR87_RS11685 at 2476.287 kb on + strand, within ABZR87_RS11685 at 2476.288 kb on - strand, within ABZR87_RS11685 at 2476.589 kb on + strand, within ABZR87_RS11685 at 2476.589 kb on + strand, within ABZR87_RS11685 at 2476.903 kb on - strand at 2477.563 kb on - strand, within ABZR87_RS11690 at 2477.970 kb on + strand, within ABZR87_RS11690 at 2477.971 kb on - strand, within ABZR87_RS11690 at 2477.971 kb on - strand, within ABZR87_RS11690 at 2477.971 kb on - strand, within ABZR87_RS11690 at 2478.024 kb on + strand, within ABZR87_RS11690 at 2478.024 kb on + strand, within ABZR87_RS11690 at 2478.025 kb on - strand, within ABZR87_RS11690 at 2478.025 kb on - strand, within ABZR87_RS11690 at 2478.025 kb on - strand, within ABZR87_RS11690 at 2478.025 kb on - strand, within ABZR87_RS11690 at 2478.025 kb on - strand, within ABZR87_RS11690 at 2478.348 kb on + strand, within ABZR87_RS11690 at 2478.468 kb on + strand, within ABZR87_RS11690 at 2478.509 kb on + strand, within ABZR87_RS11690 at 2478.510 kb on - strand, within ABZR87_RS11690 at 2478.758 kb on + strand at 2478.758 kb on + strand at 2478.759 kb on - strand at 2478.759 kb on - strand at 2478.759 kb on - strand at 2478.759 kb on - strand at 2478.759 kb on - strand at 2478.865 kb on - strand at 2478.876 kb on + strand at 2479.082 kb on + strand, within ABZR87_RS11695 at 2479.082 kb on + strand, within ABZR87_RS11695 at 2479.082 kb on + strand, within ABZR87_RS11695 at 2479.083 kb on - strand, within ABZR87_RS11695 at 2479.083 kb on - strand, within ABZR87_RS11695 at 2479.415 kb on + strand, within ABZR87_RS11695 at 2479.415 kb on + strand, within ABZR87_RS11695 at 2479.416 kb on - strand, within ABZR87_RS11695 at 2479.416 kb on - strand, within ABZR87_RS11695 at 2479.442 kb on + strand, within ABZR87_RS11695 at 2479.443 kb on - strand, within ABZR87_RS11695 at 2479.478 kb on + strand, within ABZR87_RS11695 at 2479.478 kb on + strand, within ABZR87_RS11695 at 2479.479 kb on - strand, within ABZR87_RS11695 at 2479.703 kb on + strand, within ABZR87_RS11695 at 2479.703 kb on + strand, within ABZR87_RS11695 at 2479.704 kb on - strand, within ABZR87_RS11695
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 2,475,990 - ABZR87_RS11685 0.32 -0.3 2,475,991 + ABZR87_RS11685 0.32 +0.1 2,475,991 + ABZR87_RS11685 0.32 +0.9 2,475,991 + ABZR87_RS11685 0.32 -0.1 2,475,992 - ABZR87_RS11685 0.32 -1.6 2,475,992 - ABZR87_RS11685 0.32 -1.6 2,475,992 - ABZR87_RS11685 0.32 -0.6 2,476,111 + ABZR87_RS11685 0.43 -1.4 2,476,111 + ABZR87_RS11685 0.43 +0.1 2,476,111 + ABZR87_RS11685 0.43 +0.1 2,476,112 - ABZR87_RS11685 0.43 -1.5 2,476,112 - ABZR87_RS11685 0.43 +0.3 2,476,280 + ABZR87_RS11685 0.58 -1.1 2,476,280 + ABZR87_RS11685 0.58 +0.2 2,476,280 + ABZR87_RS11685 0.58 -0.3 2,476,281 - ABZR87_RS11685 0.58 +0.0 2,476,287 + ABZR87_RS11685 0.58 +1.0 2,476,288 - ABZR87_RS11685 0.59 +0.1 2,476,589 + ABZR87_RS11685 0.86 -0.4 2,476,589 + ABZR87_RS11685 0.86 +0.1 2,476,903 - -1.5 2,477,563 - ABZR87_RS11690 0.41 +1.5 2,477,970 + ABZR87_RS11690 0.62 +0.9 2,477,971 - ABZR87_RS11690 0.62 +0.6 2,477,971 - ABZR87_RS11690 0.62 -0.1 2,477,971 - ABZR87_RS11690 0.62 +0.1 2,478,024 + ABZR87_RS11690 0.64 -0.2 2,478,024 + ABZR87_RS11690 0.64 -0.1 2,478,025 - ABZR87_RS11690 0.64 +0.7 2,478,025 - ABZR87_RS11690 0.64 -0.8 2,478,025 - ABZR87_RS11690 0.64 +0.9 2,478,025 - ABZR87_RS11690 0.64 +1.2 2,478,025 - ABZR87_RS11690 0.64 +0.6 2,478,348 + ABZR87_RS11690 0.81 +0.1 2,478,468 + ABZR87_RS11690 0.87 +0.9 2,478,509 + ABZR87_RS11690 0.89 +0.0 2,478,510 - ABZR87_RS11690 0.89 +1.9 2,478,758 + -0.7 2,478,758 + +0.5 2,478,759 - -1.0 2,478,759 - +0.5 2,478,759 - +1.5 2,478,759 - +0.4 2,478,759 - +0.5 2,478,865 - -0.9 2,478,876 + +0.4 2,479,082 + ABZR87_RS11695 0.13 +0.4 2,479,082 + ABZR87_RS11695 0.13 +0.2 2,479,082 + ABZR87_RS11695 0.13 -0.6 2,479,083 - ABZR87_RS11695 0.13 -0.0 2,479,083 - ABZR87_RS11695 0.13 +0.0 2,479,415 + ABZR87_RS11695 0.46 -0.6 2,479,415 + ABZR87_RS11695 0.46 +1.5 2,479,416 - ABZR87_RS11695 0.46 +1.5 2,479,416 - ABZR87_RS11695 0.46 -1.3 2,479,442 + ABZR87_RS11695 0.49 +0.8 2,479,443 - ABZR87_RS11695 0.49 -0.7 2,479,478 + ABZR87_RS11695 0.53 +0.1 2,479,478 + ABZR87_RS11695 0.53 +1.4 2,479,479 - ABZR87_RS11695 0.53 -0.4 2,479,703 + ABZR87_RS11695 0.75 -0.6 2,479,703 + ABZR87_RS11695 0.75 +0.5 2,479,704 - ABZR87_RS11695 0.76 -1.5
Or see this region's nucleotide sequence