Experiment: D-Trehalose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS21475 and CA265_RS21480 are separated by 12 nucleotides CA265_RS21480 and CA265_RS21485 are separated by 73 nucleotides CA265_RS21485 and CA265_RS21490 overlap by 1 nucleotides
CA265_RS21475: CA265_RS21475 - ABC transporter ATP-binding protein, at 5,290,446 to 5,291,072
_RS21475
CA265_RS21480: CA265_RS21480 - GNAT family N-acetyltransferase, at 5,291,085 to 5,291,552
_RS21480
CA265_RS21485: CA265_RS21485 - acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase, at 5,291,626 to 5,292,411
_RS21485
CA265_RS21490: CA265_RS21490 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase, at 5,292,411 to 5,293,823
_RS21490
Position (kb) 5291
5292
5293 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 5291.100 kb on - strand at 5291.141 kb on - strand, within CA265_RS21480 at 5291.141 kb on - strand, within CA265_RS21480 at 5291.141 kb on - strand, within CA265_RS21480 at 5291.263 kb on - strand, within CA265_RS21480 at 5291.314 kb on - strand, within CA265_RS21480 at 5291.361 kb on - strand, within CA265_RS21480 at 5291.361 kb on - strand, within CA265_RS21480 at 5291.557 kb on - strand at 5291.602 kb on - strand at 5291.842 kb on - strand, within CA265_RS21485 at 5291.853 kb on - strand, within CA265_RS21485 at 5291.899 kb on - strand, within CA265_RS21485 at 5291.931 kb on - strand, within CA265_RS21485 at 5291.957 kb on - strand, within CA265_RS21485 at 5292.011 kb on - strand, within CA265_RS21485 at 5292.155 kb on - strand, within CA265_RS21485 at 5292.341 kb on - strand at 5292.391 kb on - strand at 5292.393 kb on - strand at 5292.393 kb on - strand at 5292.413 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Trehalose (C) remove 5,291,100 - +0.1 5,291,141 - CA265_RS21480 0.12 +0.1 5,291,141 - CA265_RS21480 0.12 -0.4 5,291,141 - CA265_RS21480 0.12 -1.5 5,291,263 - CA265_RS21480 0.38 -0.4 5,291,314 - CA265_RS21480 0.49 -0.2 5,291,361 - CA265_RS21480 0.59 -0.3 5,291,361 - CA265_RS21480 0.59 +0.2 5,291,557 - +0.1 5,291,602 - +0.6 5,291,842 - CA265_RS21485 0.27 -1.7 5,291,853 - CA265_RS21485 0.29 -1.8 5,291,899 - CA265_RS21485 0.35 -0.1 5,291,931 - CA265_RS21485 0.39 -3.4 5,291,957 - CA265_RS21485 0.42 -0.5 5,292,011 - CA265_RS21485 0.49 -0.5 5,292,155 - CA265_RS21485 0.67 -0.7 5,292,341 - -3.4 5,292,391 - -1.9 5,292,393 - -2.4 5,292,393 - -1.4 5,292,413 - -1.4
Or see this region's nucleotide sequence