Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS08795

Experiment: D-Trehalose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose (C)
2,199,616	+		CA265_RS08790	0.11	-0.1
2,199,694	+		CA265_RS08790	0.18	-0.1
2,199,788	+		CA265_RS08790	0.27	+0.3
2,199,815	-		CA265_RS08790	0.29	-1.4
2,199,830	+		CA265_RS08790	0.31	-0.0
2,199,862	+		CA265_RS08790	0.34	+0.5
2,199,863	-		CA265_RS08790	0.34	-0.7
2,199,870	-		CA265_RS08790	0.34	-2.1
2,199,871	+		CA265_RS08790	0.34	-0.6
2,199,915	-		CA265_RS08790	0.38	-2.2
2,199,954	-		CA265_RS08790	0.42	-1.3
2,199,975	-		CA265_RS08790	0.44	-2.0
2,200,017	+		CA265_RS08790	0.48	+1.3
2,200,048	-		CA265_RS08790	0.51	-1.0
2,200,048	-		CA265_RS08790	0.51	-1.0
2,200,081	-		CA265_RS08790	0.54	-2.1
2,200,155	-		CA265_RS08790	0.60	-1.0
2,200,172	+		CA265_RS08790	0.62	-0.3
2,200,172	+		CA265_RS08790	0.62	+1.0
2,200,173	-		CA265_RS08790	0.62	-1.2
2,200,184	+		CA265_RS08790	0.63	+0.2
2,200,185	-		CA265_RS08790	0.63	-1.2
2,200,270	-		CA265_RS08790	0.71	-1.1
2,200,281	-		CA265_RS08790	0.72	-0.6
2,200,348	+		CA265_RS08790	0.78	-0.4
2,200,398	-		CA265_RS08790	0.83	-1.5
2,200,398	-		CA265_RS08790	0.83	-2.3
2,200,411	+		CA265_RS08790	0.84	-0.6
2,200,411	+		CA265_RS08790	0.84	-0.0
2,200,419	-		CA265_RS08790	0.85	-0.8
2,200,461	+		CA265_RS08790	0.89	+0.1
2,200,502	+				+0.3
2,200,503	-				-1.7
2,200,533	-				-0.6
2,200,571	+				+0.1
2,200,596	-				-3.5
2,200,632	+				+1.1
2,200,638	+				+0.3
2,200,638	+				+0.7
2,200,645	+				+0.1
2,200,658	-				-2.8
2,200,661	+				+0.5
2,200,664	-				-1.8
2,200,715	+				+0.3
2,200,737	-				-2.1
2,200,760	+				+1.0
2,200,797	+				-0.7
2,200,861	+		CA265_RS08795	0.12	+0.8
2,200,862	-		CA265_RS08795	0.12	-1.1
2,200,865	+		CA265_RS08795	0.12	-0.7
2,200,869	+		CA265_RS08795	0.13	-0.1
2,200,882	+		CA265_RS08795	0.13	-0.5
2,200,883	-		CA265_RS08795	0.13	-1.4
2,200,883	-		CA265_RS08795	0.13	-2.3
2,200,932	-		CA265_RS08795	0.16	-0.7
2,200,979	+		CA265_RS08795	0.18	-0.7
2,200,980	-		CA265_RS08795	0.18	-1.5
2,201,005	+		CA265_RS08795	0.19	-0.1
2,201,067	+		CA265_RS08795	0.22	+0.3
2,201,089	+		CA265_RS08795	0.23	+0.3
2,201,089	+		CA265_RS08795	0.23	+0.2
2,201,103	+		CA265_RS08795	0.24	+0.1
2,201,111	+		CA265_RS08795	0.24	+0.4
2,201,214	+		CA265_RS08795	0.29	+0.4
2,201,214	+		CA265_RS08795	0.29	-0.1
2,201,215	-		CA265_RS08795	0.29	-1.0
2,201,215	-		CA265_RS08795	0.29	+0.0
2,201,266	-		CA265_RS08795	0.32	-0.5
2,201,277	-		CA265_RS08795	0.32	+0.3
2,201,393	+		CA265_RS08795	0.38	-0.7
2,201,393	+		CA265_RS08795	0.38	+1.3
2,201,400	+		CA265_RS08795	0.38	+0.1
2,201,462	+		CA265_RS08795	0.41	+0.7
2,201,469	+		CA265_RS08795	0.42	-0.1
2,201,487	+		CA265_RS08795	0.43	+0.5
2,201,520	-		CA265_RS08795	0.44	-0.7
2,201,520	-		CA265_RS08795	0.44	+0.3
2,201,565	-		CA265_RS08795	0.46	-0.2
2,201,576	+		CA265_RS08795	0.47	+0.3
2,201,609	+		CA265_RS08795	0.48	-0.1
2,201,612	-		CA265_RS08795	0.49	+1.3
2,201,652	+		CA265_RS08795	0.51	-0.1
2,201,653	-		CA265_RS08795	0.51	+0.1
2,201,667	+		CA265_RS08795	0.51	+0.5
2,201,761	-		CA265_RS08795	0.56	+0.8
2,201,819	+		CA265_RS08795	0.59	-0.2
2,201,825	-		CA265_RS08795	0.59	+0.5
2,201,832	+		CA265_RS08795	0.59	+0.0
2,201,833	-		CA265_RS08795	0.59	-0.3
2,201,833	-		CA265_RS08795	0.59	+0.5
2,201,835	+		CA265_RS08795	0.59	+0.3
2,201,845	+		CA265_RS08795	0.60	-0.2
2,201,846	-		CA265_RS08795	0.60	-0.1
2,201,890	-		CA265_RS08795	0.62	-1.1
2,201,890	-		CA265_RS08795	0.62	+0.5
2,201,937	+		CA265_RS08795	0.64	+0.0
2,201,988	-		CA265_RS08795	0.67	+0.3
2,201,994	-		CA265_RS08795	0.67	-0.4
2,202,024	+		CA265_RS08795	0.69	-0.2
2,202,165	+		CA265_RS08795	0.75	+0.0
2,202,177	-		CA265_RS08795	0.76	+0.4
2,202,183	+		CA265_RS08795	0.76	+0.0
2,202,218	+		CA265_RS08795	0.78	+0.1
2,202,219	-		CA265_RS08795	0.78	+0.2
2,202,219	-		CA265_RS08795	0.78	-0.5
2,202,222	+		CA265_RS08795	0.78	-0.3
2,202,297	-		CA265_RS08795	0.82	-0.9
2,202,420	+		CA265_RS08795	0.88	-0.1
2,202,421	-		CA265_RS08795	0.88	-0.1
2,202,421	-		CA265_RS08795	0.88	-0.5
2,202,431	+		CA265_RS08795	0.88	+0.5
2,202,523	+				+1.3
2,202,523	+				+1.9
2,202,524	-				-0.1
2,202,524	-				-0.2
2,202,554	-				+0.3
2,202,563	+				+1.1
2,202,564	-				-0.6
2,202,564	-				-0.3
2,202,564	-				-0.7
2,202,747	+				-0.3
2,202,747	+				+0.7
2,202,766	-				-1.1
2,202,855	-				-0.6
2,202,859	-				+0.1
2,202,899	+				-0.1
2,202,900	-				+0.4
2,202,900	-				+0.2
2,202,911	+				-0.4
2,202,946	+				+1.2
2,202,946	+				+0.1
2,202,947	-				-0.4
2,202,982	+		CA265_RS08800	0.13	-0.3
2,202,994	+		CA265_RS08800	0.14	-0.0
2,202,994	+		CA265_RS08800	0.14	+0.6
2,202,994	+		CA265_RS08800	0.14	-0.6
2,202,995	-		CA265_RS08800	0.14	-1.1
2,203,026	-		CA265_RS08800	0.18	+0.6
2,203,032	-		CA265_RS08800	0.18	+0.2
2,203,131	+		CA265_RS08800	0.29	+0.1
2,203,187	-		CA265_RS08800	0.35	+0.0
2,203,187	-		CA265_RS08800	0.35	+0.5
2,203,211	+		CA265_RS08800	0.38	+1.5
2,203,214	+		CA265_RS08800	0.38	+0.1
2,203,217	-		CA265_RS08800	0.38	+0.4
2,203,240	-		CA265_RS08800	0.41	+1.3
2,203,242	-		CA265_RS08800	0.41	-0.1
2,203,242	-		CA265_RS08800	0.41	-0.5
2,203,242	-		CA265_RS08800	0.41	+0.4
2,203,243	+		CA265_RS08800	0.41	+0.6
2,203,244	-		CA265_RS08800	0.41	+0.6
2,203,292	+		CA265_RS08800	0.46	-0.1
2,203,424	+		CA265_RS08800	0.60	+0.3
2,203,425	-		CA265_RS08800	0.60	-0.6
2,203,526	-		CA265_RS08800	0.71	+0.7
2,203,606	+		CA265_RS08800	0.80	+0.2
2,203,616	+		CA265_RS08800	0.81	-0.7
2,203,621	+		CA265_RS08800	0.81	-1.2
2,203,622	-		CA265_RS08800	0.82	-0.1
2,203,622	-		CA265_RS08800	0.82	+0.5
2,203,622	-		CA265_RS08800	0.82	+0.2