Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_25970 and AO356_25975 are separated by 15 nucleotides AO356_25975 and AO356_25980 are separated by 242 nucleotides
AO356_25970: AO356_25970 - multidrug DMT transporter permease, at 5,869,913 to 5,870,806
_25970
AO356_25975: AO356_25975 - aldehyde dehydrogenase, at 5,870,822 to 5,872,447
_25975
AO356_25980: AO356_25980 - autotransporter subunit beta, at 5,872,690 to 5,873,604
_25980
Position (kb)
5870
5871
5872
5873 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5869.882 kb on + strand at 5869.882 kb on + strand at 5869.883 kb on - strand at 5869.883 kb on - strand at 5870.166 kb on + strand, within AO356_25970 at 5870.166 kb on + strand, within AO356_25970 at 5870.166 kb on + strand, within AO356_25970 at 5870.166 kb on + strand, within AO356_25970 at 5870.167 kb on - strand, within AO356_25970 at 5870.167 kb on - strand, within AO356_25970 at 5870.177 kb on + strand, within AO356_25970 at 5870.177 kb on + strand, within AO356_25970 at 5870.178 kb on - strand, within AO356_25970 at 5870.178 kb on - strand, within AO356_25970 at 5870.213 kb on + strand, within AO356_25970 at 5870.214 kb on - strand, within AO356_25970 at 5870.214 kb on - strand, within AO356_25970 at 5870.214 kb on - strand, within AO356_25970 at 5870.238 kb on + strand, within AO356_25970 at 5870.238 kb on + strand, within AO356_25970 at 5870.591 kb on + strand, within AO356_25970 at 5870.591 kb on + strand, within AO356_25970 at 5870.591 kb on + strand, within AO356_25970 at 5870.592 kb on - strand, within AO356_25970 at 5870.592 kb on - strand, within AO356_25970 at 5870.804 kb on + strand at 5870.832 kb on + strand at 5870.832 kb on + strand at 5870.832 kb on + strand at 5870.832 kb on + strand at 5870.832 kb on + strand at 5870.833 kb on - strand at 5870.833 kb on - strand at 5871.138 kb on - strand, within AO356_25975 at 5871.141 kb on + strand, within AO356_25975 at 5871.211 kb on - strand, within AO356_25975 at 5871.252 kb on + strand, within AO356_25975 at 5871.253 kb on - strand, within AO356_25975 at 5871.253 kb on - strand, within AO356_25975 at 5871.340 kb on - strand, within AO356_25975 at 5871.729 kb on + strand, within AO356_25975 at 5871.729 kb on + strand, within AO356_25975 at 5871.729 kb on + strand, within AO356_25975 at 5871.730 kb on - strand, within AO356_25975 at 5871.730 kb on - strand, within AO356_25975 at 5871.730 kb on - strand, within AO356_25975 at 5871.889 kb on - strand, within AO356_25975 at 5872.014 kb on + strand, within AO356_25975 at 5872.014 kb on + strand, within AO356_25975 at 5872.015 kb on - strand, within AO356_25975 at 5872.189 kb on - strand, within AO356_25975 at 5872.290 kb on + strand at 5872.291 kb on - strand at 5872.291 kb on - strand at 5872.291 kb on - strand at 5872.453 kb on + strand at 5872.514 kb on + strand at 5872.517 kb on - strand at 5872.517 kb on - strand at 5872.575 kb on + strand at 5872.719 kb on + strand at 5872.775 kb on + strand at 5872.775 kb on + strand at 5872.952 kb on + strand, within AO356_25980 at 5872.952 kb on + strand, within AO356_25980 at 5872.952 kb on + strand, within AO356_25980 at 5872.953 kb on - strand, within AO356_25980 at 5872.956 kb on + strand, within AO356_25980 at 5872.956 kb on + strand, within AO356_25980 at 5872.957 kb on - strand, within AO356_25980 at 5873.178 kb on - strand, within AO356_25980 at 5873.376 kb on + strand, within AO356_25980
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 5,869,882 + -0.6 5,869,882 + -0.7 5,869,883 - +0.8 5,869,883 - +0.5 5,870,166 + AO356_25970 0.28 +0.3 5,870,166 + AO356_25970 0.28 -0.2 5,870,166 + AO356_25970 0.28 -0.3 5,870,166 + AO356_25970 0.28 +0.1 5,870,167 - AO356_25970 0.28 -0.7 5,870,167 - AO356_25970 0.28 +0.0 5,870,177 + AO356_25970 0.30 +1.9 5,870,177 + AO356_25970 0.30 -0.7 5,870,178 - AO356_25970 0.30 +0.9 5,870,178 - AO356_25970 0.30 +0.8 5,870,213 + AO356_25970 0.34 -0.4 5,870,214 - AO356_25970 0.34 +0.5 5,870,214 - AO356_25970 0.34 +0.3 5,870,214 - AO356_25970 0.34 +0.0 5,870,238 + AO356_25970 0.36 +0.2 5,870,238 + AO356_25970 0.36 -0.7 5,870,591 + AO356_25970 0.76 -0.1 5,870,591 + AO356_25970 0.76 +0.1 5,870,591 + AO356_25970 0.76 +0.0 5,870,592 - AO356_25970 0.76 +0.7 5,870,592 - AO356_25970 0.76 -1.1 5,870,804 + -0.5 5,870,832 + -0.7 5,870,832 + +1.2 5,870,832 + -0.4 5,870,832 + +0.2 5,870,832 + +0.4 5,870,833 - -0.5 5,870,833 - -0.4 5,871,138 - AO356_25975 0.19 -0.1 5,871,141 + AO356_25975 0.20 -0.1 5,871,211 - AO356_25975 0.24 -0.2 5,871,252 + AO356_25975 0.26 -0.3 5,871,253 - AO356_25975 0.27 -0.7 5,871,253 - AO356_25975 0.27 +0.2 5,871,340 - AO356_25975 0.32 -1.5 5,871,729 + AO356_25975 0.56 -0.8 5,871,729 + AO356_25975 0.56 -0.7 5,871,729 + AO356_25975 0.56 -1.7 5,871,730 - AO356_25975 0.56 -0.6 5,871,730 - AO356_25975 0.56 +0.4 5,871,730 - AO356_25975 0.56 -0.3 5,871,889 - AO356_25975 0.66 +0.0 5,872,014 + AO356_25975 0.73 -1.7 5,872,014 + AO356_25975 0.73 -0.7 5,872,015 - AO356_25975 0.73 -1.7 5,872,189 - AO356_25975 0.84 -1.9 5,872,290 + -1.0 5,872,291 - -1.1 5,872,291 - +0.1 5,872,291 - +0.3 5,872,453 + -0.8 5,872,514 + +0.3 5,872,517 - +2.2 5,872,517 - +1.3 5,872,575 + +0.5 5,872,719 + -0.1 5,872,775 + +0.2 5,872,775 + +0.4 5,872,952 + AO356_25980 0.29 +0.1 5,872,952 + AO356_25980 0.29 -0.4 5,872,952 + AO356_25980 0.29 +0.2 5,872,953 - AO356_25980 0.29 -1.3 5,872,956 + AO356_25980 0.29 -0.6 5,872,956 + AO356_25980 0.29 -0.6 5,872,957 - AO356_25980 0.29 -0.8 5,873,178 - AO356_25980 0.53 +0.8 5,873,376 + AO356_25980 0.75 -0.4
Or see this region's nucleotide sequence