Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_25955 and AO356_25960 are separated by 383 nucleotides AO356_25960 and AO356_25965 are separated by 41 nucleotides AO356_25965 and AO356_25970 are separated by 133 nucleotides
AO356_25955: AO356_25955 - hypothetical protein, at 5,866,896 to 5,867,567
_25955
AO356_25960: AO356_25960 - hypothetical protein, at 5,867,951 to 5,869,300
_25960
AO356_25965: AO356_25965 - AsnC family transcriptional regulator, at 5,869,342 to 5,869,779
_25965
AO356_25970: AO356_25970 - multidrug DMT transporter permease, at 5,869,913 to 5,870,806
_25970
Position (kb) 5867
5868
5869
5870 Strain fitness (log2 ratio) -1
0
1
2 at 5866.974 kb on + strand, within AO356_25955 at 5866.974 kb on + strand, within AO356_25955 at 5866.975 kb on - strand, within AO356_25955 at 5866.975 kb on - strand, within AO356_25955 at 5866.975 kb on - strand, within AO356_25955 at 5866.975 kb on - strand, within AO356_25955 at 5867.020 kb on - strand, within AO356_25955 at 5867.020 kb on - strand, within AO356_25955 at 5867.079 kb on + strand, within AO356_25955 at 5867.079 kb on + strand, within AO356_25955 at 5867.191 kb on - strand, within AO356_25955 at 5867.252 kb on - strand, within AO356_25955 at 5867.271 kb on + strand, within AO356_25955 at 5867.272 kb on - strand, within AO356_25955 at 5867.436 kb on + strand, within AO356_25955 at 5867.436 kb on + strand, within AO356_25955 at 5867.437 kb on - strand, within AO356_25955 at 5867.475 kb on + strand, within AO356_25955 at 5867.475 kb on + strand, within AO356_25955 at 5867.475 kb on + strand, within AO356_25955 at 5867.476 kb on - strand, within AO356_25955 at 5867.476 kb on - strand, within AO356_25955 at 5867.476 kb on - strand, within AO356_25955 at 5867.476 kb on - strand, within AO356_25955 at 5867.499 kb on + strand, within AO356_25955 at 5867.499 kb on + strand, within AO356_25955 at 5867.499 kb on + strand, within AO356_25955 at 5867.500 kb on - strand at 5867.503 kb on + strand at 5867.504 kb on - strand at 5867.504 kb on - strand at 5867.511 kb on + strand at 5867.511 kb on + strand at 5867.511 kb on + strand at 5867.511 kb on + strand at 5867.512 kb on - strand at 5867.512 kb on - strand at 5867.676 kb on + strand at 5867.676 kb on + strand at 5867.677 kb on - strand at 5867.685 kb on + strand at 5867.685 kb on + strand at 5867.686 kb on - strand at 5867.686 kb on - strand at 5867.686 kb on - strand at 5867.686 kb on - strand at 5867.686 kb on - strand at 5867.686 kb on - strand at 5867.691 kb on + strand at 5867.691 kb on + strand at 5867.691 kb on + strand at 5867.691 kb on + strand at 5867.691 kb on + strand at 5867.691 kb on + strand at 5867.691 kb on + strand at 5867.691 kb on + strand at 5867.692 kb on - strand at 5867.692 kb on - strand at 5867.707 kb on + strand at 5867.708 kb on - strand at 5867.743 kb on - strand at 5867.770 kb on + strand at 5867.771 kb on - strand at 5867.771 kb on - strand at 5867.878 kb on + strand at 5867.936 kb on + strand at 5867.946 kb on + strand at 5867.946 kb on + strand at 5867.946 kb on + strand at 5867.947 kb on - strand at 5868.000 kb on + strand at 5868.000 kb on + strand at 5868.001 kb on - strand at 5868.068 kb on + strand at 5868.069 kb on - strand at 5868.194 kb on + strand, within AO356_25960 at 5868.195 kb on - strand, within AO356_25960 at 5868.215 kb on + strand, within AO356_25960 at 5868.215 kb on + strand, within AO356_25960 at 5868.216 kb on - strand, within AO356_25960 at 5868.216 kb on - strand, within AO356_25960 at 5868.216 kb on - strand, within AO356_25960 at 5868.253 kb on - strand, within AO356_25960 at 5868.279 kb on - strand, within AO356_25960 at 5868.279 kb on - strand, within AO356_25960 at 5868.300 kb on - strand, within AO356_25960 at 5868.300 kb on - strand, within AO356_25960 at 5868.373 kb on + strand, within AO356_25960 at 5868.373 kb on + strand, within AO356_25960 at 5868.398 kb on + strand, within AO356_25960 at 5868.398 kb on + strand, within AO356_25960 at 5868.399 kb on - strand, within AO356_25960 at 5868.413 kb on + strand, within AO356_25960 at 5868.413 kb on + strand, within AO356_25960 at 5868.413 kb on + strand, within AO356_25960 at 5868.413 kb on + strand, within AO356_25960 at 5868.414 kb on - strand, within AO356_25960 at 5868.414 kb on - strand, within AO356_25960 at 5868.414 kb on - strand, within AO356_25960 at 5868.414 kb on - strand, within AO356_25960 at 5868.414 kb on - strand, within AO356_25960 at 5868.414 kb on - strand, within AO356_25960 at 5868.421 kb on + strand, within AO356_25960 at 5868.423 kb on + strand, within AO356_25960 at 5868.423 kb on + strand, within AO356_25960 at 5868.424 kb on - strand, within AO356_25960 at 5868.424 kb on - strand, within AO356_25960 at 5868.424 kb on - strand, within AO356_25960 at 5868.431 kb on + strand, within AO356_25960 at 5868.432 kb on - strand, within AO356_25960 at 5868.432 kb on - strand, within AO356_25960 at 5868.481 kb on + strand, within AO356_25960 at 5868.481 kb on + strand, within AO356_25960 at 5868.482 kb on - strand, within AO356_25960 at 5868.543 kb on + strand, within AO356_25960 at 5868.543 kb on + strand, within AO356_25960 at 5868.544 kb on - strand, within AO356_25960 at 5868.544 kb on - strand, within AO356_25960 at 5868.544 kb on - strand, within AO356_25960 at 5868.544 kb on - strand, within AO356_25960 at 5868.634 kb on + strand, within AO356_25960 at 5868.635 kb on - strand, within AO356_25960 at 5868.716 kb on + strand, within AO356_25960 at 5868.796 kb on - strand, within AO356_25960 at 5868.796 kb on - strand, within AO356_25960 at 5868.811 kb on + strand, within AO356_25960 at 5868.811 kb on + strand, within AO356_25960 at 5868.811 kb on + strand, within AO356_25960 at 5868.812 kb on - strand, within AO356_25960 at 5869.112 kb on + strand, within AO356_25960 at 5869.149 kb on - strand, within AO356_25960 at 5869.178 kb on + strand at 5869.179 kb on - strand at 5869.298 kb on + strand at 5869.882 kb on + strand at 5869.882 kb on + strand at 5869.883 kb on - strand at 5869.883 kb on - strand at 5870.166 kb on + strand, within AO356_25970 at 5870.166 kb on + strand, within AO356_25970 at 5870.166 kb on + strand, within AO356_25970 at 5870.166 kb on + strand, within AO356_25970 at 5870.167 kb on - strand, within AO356_25970 at 5870.167 kb on - strand, within AO356_25970 at 5870.177 kb on + strand, within AO356_25970 at 5870.177 kb on + strand, within AO356_25970 at 5870.178 kb on - strand, within AO356_25970 at 5870.178 kb on - strand, within AO356_25970 at 5870.213 kb on + strand, within AO356_25970 at 5870.214 kb on - strand, within AO356_25970 at 5870.214 kb on - strand, within AO356_25970 at 5870.214 kb on - strand, within AO356_25970 at 5870.238 kb on + strand, within AO356_25970 at 5870.238 kb on + strand, within AO356_25970
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 5,866,974 + AO356_25955 0.12 +0.7 5,866,974 + AO356_25955 0.12 -1.3 5,866,975 - AO356_25955 0.12 -0.1 5,866,975 - AO356_25955 0.12 +0.7 5,866,975 - AO356_25955 0.12 +0.0 5,866,975 - AO356_25955 0.12 +0.0 5,867,020 - AO356_25955 0.18 +0.4 5,867,020 - AO356_25955 0.18 -0.8 5,867,079 + AO356_25955 0.27 -0.4 5,867,079 + AO356_25955 0.27 +0.9 5,867,191 - AO356_25955 0.44 +0.6 5,867,252 - AO356_25955 0.53 +1.1 5,867,271 + AO356_25955 0.56 +1.0 5,867,272 - AO356_25955 0.56 +0.6 5,867,436 + AO356_25955 0.80 -0.4 5,867,436 + AO356_25955 0.80 +1.0 5,867,437 - AO356_25955 0.81 -0.2 5,867,475 + AO356_25955 0.86 +0.1 5,867,475 + AO356_25955 0.86 -0.9 5,867,475 + AO356_25955 0.86 -0.5 5,867,476 - AO356_25955 0.86 +0.2 5,867,476 - AO356_25955 0.86 +0.0 5,867,476 - AO356_25955 0.86 +0.4 5,867,476 - AO356_25955 0.86 +0.2 5,867,499 + AO356_25955 0.90 +0.6 5,867,499 + AO356_25955 0.90 +0.4 5,867,499 + AO356_25955 0.90 -1.5 5,867,500 - +2.0 5,867,503 + +0.4 5,867,504 - -0.1 5,867,504 - +1.6 5,867,511 + -0.4 5,867,511 + -0.4 5,867,511 + -0.7 5,867,511 + -0.4 5,867,512 - +0.7 5,867,512 - +1.1 5,867,676 + +0.5 5,867,676 + +0.1 5,867,677 - +0.6 5,867,685 + +0.5 5,867,685 + -0.8 5,867,686 - +0.6 5,867,686 - +0.3 5,867,686 - -0.2 5,867,686 - +1.0 5,867,686 - +0.7 5,867,686 - +0.1 5,867,691 + +0.1 5,867,691 + +0.1 5,867,691 + +2.0 5,867,691 + -0.4 5,867,691 + +0.5 5,867,691 + +0.7 5,867,691 + +0.0 5,867,691 + +0.2 5,867,692 - +0.7 5,867,692 - +0.3 5,867,707 + +1.6 5,867,708 - -1.0 5,867,743 - -0.2 5,867,770 + -0.7 5,867,771 - -0.5 5,867,771 - +0.0 5,867,878 + +0.5 5,867,936 + +0.3 5,867,946 + +0.6 5,867,946 + +0.3 5,867,946 + -0.9 5,867,947 - -1.5 5,868,000 + +0.8 5,868,000 + -1.0 5,868,001 - +0.7 5,868,068 + -0.4 5,868,069 - +0.2 5,868,194 + AO356_25960 0.18 -1.1 5,868,195 - AO356_25960 0.18 +0.7 5,868,215 + AO356_25960 0.20 -0.4 5,868,215 + AO356_25960 0.20 +0.9 5,868,216 - AO356_25960 0.20 +0.6 5,868,216 - AO356_25960 0.20 +0.2 5,868,216 - AO356_25960 0.20 -0.3 5,868,253 - AO356_25960 0.22 -0.6 5,868,279 - AO356_25960 0.24 +0.8 5,868,279 - AO356_25960 0.24 +0.9 5,868,300 - AO356_25960 0.26 -0.1 5,868,300 - AO356_25960 0.26 -0.3 5,868,373 + AO356_25960 0.31 -1.2 5,868,373 + AO356_25960 0.31 +0.0 5,868,398 + AO356_25960 0.33 +0.6 5,868,398 + AO356_25960 0.33 -0.6 5,868,399 - AO356_25960 0.33 -0.8 5,868,413 + AO356_25960 0.34 +0.6 5,868,413 + AO356_25960 0.34 +0.7 5,868,413 + AO356_25960 0.34 -1.0 5,868,413 + AO356_25960 0.34 +0.5 5,868,414 - AO356_25960 0.34 +1.3 5,868,414 - AO356_25960 0.34 -0.9 5,868,414 - AO356_25960 0.34 +0.2 5,868,414 - AO356_25960 0.34 +0.1 5,868,414 - AO356_25960 0.34 +0.0 5,868,414 - AO356_25960 0.34 +0.1 5,868,421 + AO356_25960 0.35 +0.0 5,868,423 + AO356_25960 0.35 -0.3 5,868,423 + AO356_25960 0.35 +0.6 5,868,424 - AO356_25960 0.35 +0.1 5,868,424 - AO356_25960 0.35 -0.1 5,868,424 - AO356_25960 0.35 +0.8 5,868,431 + AO356_25960 0.36 +0.1 5,868,432 - AO356_25960 0.36 +0.1 5,868,432 - AO356_25960 0.36 -0.3 5,868,481 + AO356_25960 0.39 -0.3 5,868,481 + AO356_25960 0.39 +0.3 5,868,482 - AO356_25960 0.39 +0.1 5,868,543 + AO356_25960 0.44 +0.6 5,868,543 + AO356_25960 0.44 -0.3 5,868,544 - AO356_25960 0.44 -1.7 5,868,544 - AO356_25960 0.44 +0.4 5,868,544 - AO356_25960 0.44 +0.1 5,868,544 - AO356_25960 0.44 -0.2 5,868,634 + AO356_25960 0.51 +0.7 5,868,635 - AO356_25960 0.51 +0.1 5,868,716 + AO356_25960 0.57 +0.5 5,868,796 - AO356_25960 0.63 +0.1 5,868,796 - AO356_25960 0.63 -0.2 5,868,811 + AO356_25960 0.64 +0.1 5,868,811 + AO356_25960 0.64 -0.3 5,868,811 + AO356_25960 0.64 -0.2 5,868,812 - AO356_25960 0.64 -0.2 5,869,112 + AO356_25960 0.86 +0.3 5,869,149 - AO356_25960 0.89 +0.3 5,869,178 + +1.3 5,869,179 - -0.2 5,869,298 + -1.0 5,869,882 + -0.6 5,869,882 + -0.7 5,869,883 - +0.8 5,869,883 - +0.5 5,870,166 + AO356_25970 0.28 +0.3 5,870,166 + AO356_25970 0.28 -0.2 5,870,166 + AO356_25970 0.28 -0.3 5,870,166 + AO356_25970 0.28 +0.1 5,870,167 - AO356_25970 0.28 -0.7 5,870,167 - AO356_25970 0.28 +0.0 5,870,177 + AO356_25970 0.30 +1.9 5,870,177 + AO356_25970 0.30 -0.7 5,870,178 - AO356_25970 0.30 +0.9 5,870,178 - AO356_25970 0.30 +0.8 5,870,213 + AO356_25970 0.34 -0.4 5,870,214 - AO356_25970 0.34 +0.5 5,870,214 - AO356_25970 0.34 +0.3 5,870,214 - AO356_25970 0.34 +0.0 5,870,238 + AO356_25970 0.36 +0.2 5,870,238 + AO356_25970 0.36 -0.7
Or see this region's nucleotide sequence