Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_21255 and AO356_21260 are separated by 180 nucleotides AO356_21260 and AO356_21265 are separated by 83 nucleotides
AO356_21255: AO356_21255 - alpha/beta hydrolase, at 4,770,537 to 4,771,367
_21255
AO356_21260: AO356_21260 - 6-carboxy-5,6,7,8-tetrahydropterin synthase, at 4,771,548 to 4,771,904
_21260
AO356_21265: AO356_21265 - hypothetical protein, at 4,771,988 to 4,773,067
_21265
Position (kb) 4771
4772 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4770.838 kb on + strand, within AO356_21255 at 4770.838 kb on + strand, within AO356_21255 at 4770.889 kb on + strand, within AO356_21255 at 4770.889 kb on + strand, within AO356_21255 at 4770.889 kb on + strand, within AO356_21255 at 4770.890 kb on - strand, within AO356_21255 at 4770.890 kb on - strand, within AO356_21255 at 4770.890 kb on - strand, within AO356_21255 at 4770.890 kb on - strand, within AO356_21255 at 4770.964 kb on - strand, within AO356_21255 at 4770.964 kb on - strand, within AO356_21255 at 4770.964 kb on - strand, within AO356_21255 at 4770.964 kb on - strand, within AO356_21255 at 4770.964 kb on - strand, within AO356_21255 at 4770.964 kb on - strand, within AO356_21255 at 4771.201 kb on + strand, within AO356_21255 at 4771.202 kb on - strand, within AO356_21255 at 4771.202 kb on - strand, within AO356_21255 at 4771.202 kb on - strand, within AO356_21255 at 4771.252 kb on + strand, within AO356_21255 at 4771.253 kb on - strand, within AO356_21255 at 4771.253 kb on - strand, within AO356_21255 at 4771.253 kb on - strand, within AO356_21255 at 4771.339 kb on + strand at 4771.340 kb on - strand at 4771.340 kb on - strand at 4771.374 kb on + strand at 4771.407 kb on + strand at 4771.408 kb on - strand at 4771.408 kb on - strand at 4771.497 kb on + strand at 4771.497 kb on + strand at 4771.498 kb on - strand at 4771.498 kb on - strand at 4771.562 kb on - strand at 4771.562 kb on - strand at 4771.697 kb on - strand, within AO356_21260 at 4771.697 kb on - strand, within AO356_21260 at 4771.919 kb on + strand at 4771.919 kb on + strand at 4771.920 kb on - strand at 4771.920 kb on - strand at 4771.920 kb on - strand at 4771.990 kb on - strand at 4772.170 kb on - strand, within AO356_21265 at 4772.170 kb on - strand, within AO356_21265 at 4772.308 kb on - strand, within AO356_21265 at 4772.326 kb on - strand, within AO356_21265 at 4772.349 kb on + strand, within AO356_21265 at 4772.776 kb on - strand, within AO356_21265 at 4772.776 kb on - strand, within AO356_21265 at 4772.776 kb on - strand, within AO356_21265 at 4772.776 kb on - strand, within AO356_21265 at 4772.776 kb on - strand, within AO356_21265
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 4,770,838 + AO356_21255 0.36 -0.1 4,770,838 + AO356_21255 0.36 -0.0 4,770,889 + AO356_21255 0.42 +0.7 4,770,889 + AO356_21255 0.42 -1.0 4,770,889 + AO356_21255 0.42 -0.4 4,770,890 - AO356_21255 0.42 +0.3 4,770,890 - AO356_21255 0.42 -0.6 4,770,890 - AO356_21255 0.42 +0.8 4,770,890 - AO356_21255 0.42 -0.2 4,770,964 - AO356_21255 0.51 -0.8 4,770,964 - AO356_21255 0.51 +1.4 4,770,964 - AO356_21255 0.51 -0.3 4,770,964 - AO356_21255 0.51 +0.9 4,770,964 - AO356_21255 0.51 +0.3 4,770,964 - AO356_21255 0.51 +0.0 4,771,201 + AO356_21255 0.80 -0.2 4,771,202 - AO356_21255 0.80 +0.2 4,771,202 - AO356_21255 0.80 +0.1 4,771,202 - AO356_21255 0.80 +0.5 4,771,252 + AO356_21255 0.86 +0.9 4,771,253 - AO356_21255 0.86 +0.5 4,771,253 - AO356_21255 0.86 +0.1 4,771,253 - AO356_21255 0.86 +0.3 4,771,339 + +1.2 4,771,340 - -0.1 4,771,340 - +0.3 4,771,374 + +0.0 4,771,407 + +1.0 4,771,408 - +0.1 4,771,408 - -0.0 4,771,497 + +0.8 4,771,497 + +1.0 4,771,498 - -0.1 4,771,498 - +0.9 4,771,562 - +1.4 4,771,562 - +0.2 4,771,697 - AO356_21260 0.42 -0.5 4,771,697 - AO356_21260 0.42 -0.6 4,771,919 + -0.2 4,771,919 + +0.2 4,771,920 - +0.4 4,771,920 - +0.4 4,771,920 - -0.2 4,771,990 - -0.1 4,772,170 - AO356_21265 0.17 +0.1 4,772,170 - AO356_21265 0.17 +0.4 4,772,308 - AO356_21265 0.30 +1.0 4,772,326 - AO356_21265 0.31 -0.1 4,772,349 + AO356_21265 0.33 +0.6 4,772,776 - AO356_21265 0.73 -0.7 4,772,776 - AO356_21265 0.73 +2.0 4,772,776 - AO356_21265 0.73 -1.8 4,772,776 - AO356_21265 0.73 +1.1 4,772,776 - AO356_21265 0.73 +0.9
Or see this region's nucleotide sequence