Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_06815 and AO356_06820 are separated by 41 nucleotides AO356_06820 and AO356_06825 are separated by 108 nucleotides AO356_06825 and AO356_06830 are separated by 182 nucleotides
AO356_06815: AO356_06815 - isomerase, at 1,505,973 to 1,506,722
_06815
AO356_06820: AO356_06820 - arylsulfatase, at 1,506,764 to 1,507,417
_06820
AO356_06825: AO356_06825 - lactoylglutathione lyase, at 1,507,526 to 1,507,942
_06825
AO356_06830: AO356_06830 - hypothetical protein, at 1,508,125 to 1,509,174
_06830
Position (kb)
1507
1508 Strain fitness (log2 ratio)
-2
-1
0
1 at 1506.669 kb on + strand at 1506.670 kb on - strand at 1506.670 kb on - strand at 1506.812 kb on + strand at 1506.879 kb on - strand, within AO356_06820 at 1506.879 kb on - strand, within AO356_06820 at 1506.879 kb on - strand, within AO356_06820 at 1506.981 kb on + strand, within AO356_06820 at 1506.981 kb on + strand, within AO356_06820 at 1507.048 kb on + strand, within AO356_06820 at 1507.048 kb on + strand, within AO356_06820 at 1507.049 kb on - strand, within AO356_06820 at 1507.220 kb on + strand, within AO356_06820 at 1507.220 kb on + strand, within AO356_06820 at 1507.220 kb on + strand, within AO356_06820 at 1507.220 kb on + strand, within AO356_06820 at 1507.220 kb on + strand, within AO356_06820 at 1507.228 kb on - strand, within AO356_06820 at 1507.228 kb on - strand, within AO356_06820 at 1507.241 kb on - strand, within AO356_06820 at 1507.241 kb on - strand, within AO356_06820 at 1507.241 kb on - strand, within AO356_06820 at 1507.396 kb on + strand at 1507.421 kb on + strand at 1507.421 kb on + strand at 1507.421 kb on + strand at 1507.421 kb on + strand at 1507.421 kb on + strand at 1507.422 kb on - strand at 1507.422 kb on - strand at 1507.493 kb on + strand at 1507.525 kb on + strand at 1507.572 kb on + strand, within AO356_06825 at 1507.572 kb on + strand, within AO356_06825 at 1507.573 kb on - strand, within AO356_06825 at 1507.601 kb on + strand, within AO356_06825 at 1507.601 kb on + strand, within AO356_06825 at 1507.602 kb on - strand, within AO356_06825 at 1507.647 kb on + strand, within AO356_06825 at 1507.647 kb on + strand, within AO356_06825 at 1507.648 kb on - strand, within AO356_06825 at 1507.648 kb on - strand, within AO356_06825 at 1507.648 kb on - strand, within AO356_06825 at 1507.648 kb on - strand, within AO356_06825 at 1507.884 kb on - strand, within AO356_06825 at 1507.884 kb on - strand, within AO356_06825 at 1507.993 kb on + strand at 1507.993 kb on + strand at 1507.993 kb on + strand at 1508.181 kb on - strand at 1508.181 kb on - strand at 1508.181 kb on - strand at 1508.181 kb on - strand at 1508.262 kb on + strand, within AO356_06830 at 1508.284 kb on + strand, within AO356_06830 at 1508.285 kb on - strand, within AO356_06830 at 1508.285 kb on - strand, within AO356_06830 at 1508.438 kb on - strand, within AO356_06830 at 1508.715 kb on + strand, within AO356_06830 at 1508.716 kb on - strand, within AO356_06830 at 1508.770 kb on + strand, within AO356_06830 at 1508.770 kb on + strand, within AO356_06830 at 1508.770 kb on + strand, within AO356_06830 at 1508.771 kb on - strand, within AO356_06830 at 1508.771 kb on - strand, within AO356_06830 at 1508.842 kb on + strand, within AO356_06830 at 1508.842 kb on + strand, within AO356_06830 at 1508.932 kb on + strand, within AO356_06830 at 1508.933 kb on - strand, within AO356_06830 at 1508.933 kb on - strand, within AO356_06830
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 1,506,669 + +0.9 1,506,670 - +0.2 1,506,670 - -0.0 1,506,812 + -1.1 1,506,879 - AO356_06820 0.18 -0.5 1,506,879 - AO356_06820 0.18 +1.0 1,506,879 - AO356_06820 0.18 +0.2 1,506,981 + AO356_06820 0.33 +1.5 1,506,981 + AO356_06820 0.33 +0.6 1,507,048 + AO356_06820 0.43 +0.6 1,507,048 + AO356_06820 0.43 +0.6 1,507,049 - AO356_06820 0.44 +0.4 1,507,220 + AO356_06820 0.70 +0.8 1,507,220 + AO356_06820 0.70 +1.1 1,507,220 + AO356_06820 0.70 -0.0 1,507,220 + AO356_06820 0.70 -0.0 1,507,220 + AO356_06820 0.70 +0.1 1,507,228 - AO356_06820 0.71 +0.6 1,507,228 - AO356_06820 0.71 +0.1 1,507,241 - AO356_06820 0.73 +0.6 1,507,241 - AO356_06820 0.73 -0.0 1,507,241 - AO356_06820 0.73 +1.3 1,507,396 + +0.9 1,507,421 + -2.5 1,507,421 + -0.8 1,507,421 + +0.6 1,507,421 + -1.1 1,507,421 + -0.3 1,507,422 - -0.1 1,507,422 - +1.0 1,507,493 + +0.4 1,507,525 + -0.2 1,507,572 + AO356_06825 0.11 +0.1 1,507,572 + AO356_06825 0.11 -0.0 1,507,573 - AO356_06825 0.11 +1.1 1,507,601 + AO356_06825 0.18 -0.1 1,507,601 + AO356_06825 0.18 +0.4 1,507,602 - AO356_06825 0.18 +0.1 1,507,647 + AO356_06825 0.29 +0.5 1,507,647 + AO356_06825 0.29 -2.4 1,507,648 - AO356_06825 0.29 -0.3 1,507,648 - AO356_06825 0.29 +0.4 1,507,648 - AO356_06825 0.29 +1.0 1,507,648 - AO356_06825 0.29 +0.2 1,507,884 - AO356_06825 0.86 +0.9 1,507,884 - AO356_06825 0.86 +0.6 1,507,993 + -0.4 1,507,993 + -0.1 1,507,993 + -0.2 1,508,181 - +0.5 1,508,181 - -0.2 1,508,181 - +0.0 1,508,181 - +0.2 1,508,262 + AO356_06830 0.13 -0.4 1,508,284 + AO356_06830 0.15 -0.9 1,508,285 - AO356_06830 0.15 +0.7 1,508,285 - AO356_06830 0.15 -0.1 1,508,438 - AO356_06830 0.30 +0.6 1,508,715 + AO356_06830 0.56 +0.2 1,508,716 - AO356_06830 0.56 +0.9 1,508,770 + AO356_06830 0.61 +0.1 1,508,770 + AO356_06830 0.61 +0.1 1,508,770 + AO356_06830 0.61 -0.7 1,508,771 - AO356_06830 0.62 +0.6 1,508,771 - AO356_06830 0.62 -1.4 1,508,842 + AO356_06830 0.68 -0.6 1,508,842 + AO356_06830 0.68 -1.1 1,508,932 + AO356_06830 0.77 +1.1 1,508,933 - AO356_06830 0.77 -0.3 1,508,933 - AO356_06830 0.77 +1.2
Or see this region's nucleotide sequence