Experiment: 3-Hydroxypropionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS01810 and ABZR87_RS01815 are separated by 33 nucleotides ABZR87_RS01815 and ABZR87_RS01820 are separated by 196 nucleotides ABZR87_RS01820 and ABZR87_RS01825 are separated by 37 nucleotides
ABZR87_RS01810: ABZR87_RS01810 - glutamate 5-kinase, at 384,943 to 386,067
_RS01810
ABZR87_RS01815: ABZR87_RS01815 - GTPase ObgE, at 386,101 to 387,195
_RS01815
ABZR87_RS01820: ABZR87_RS01820 - 50S ribosomal protein L27, at 387,392 to 387,652
_RS01820
ABZR87_RS01825: ABZR87_RS01825 - 50S ribosomal protein L21, at 387,690 to 388,001
_RS01825
Position (kb) 386
387
388 Strain fitness (log2 ratio) -2
-1
0
1 at 386.103 kb on - strand at 386.103 kb on - strand at 386.103 kb on - strand at 387.232 kb on - strand at 387.265 kb on - strand at 387.304 kb on - strand at 387.333 kb on - strand at 387.377 kb on + strand at 387.378 kb on - strand at 387.380 kb on + strand at 387.380 kb on + strand at 387.380 kb on + strand at 387.381 kb on - strand at 387.381 kb on - strand at 387.381 kb on - strand at 387.381 kb on - strand at 387.381 kb on - strand at 387.381 kb on - strand at 387.394 kb on - strand at 388.093 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 3-Hydroxypropionate (C) remove 386,103 - +0.7 386,103 - +1.4 386,103 - -0.1 387,232 - +0.2 387,265 - +0.0 387,304 - -0.9 387,333 - +0.2 387,377 + -1.4 387,378 - +0.3 387,380 + -0.1 387,380 + +0.0 387,380 + +0.9 387,381 - -0.5 387,381 - -0.8 387,381 - +1.1 387,381 - -0.8 387,381 - +0.1 387,381 - +0.1 387,394 - -2.2 388,093 - -0.1
Or see this region's nucleotide sequence