Experiment: 3-Hydroxypropionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS01125 and ABZR87_RS01130 overlap by 1 nucleotides ABZR87_RS01130 and ABZR87_RS01135 are separated by 498 nucleotides
ABZR87_RS01125: ABZR87_RS01125 - FAD-linked oxidase C-terminal domain-containing protein, at 233,091 to 234,509
_RS01125
ABZR87_RS01130: ABZR87_RS01130 - LysR substrate-binding domain-containing protein, at 234,509 to 235,399
_RS01130
ABZR87_RS01135: ABZR87_RS01135 - FAD-linked oxidase C-terminal domain-containing protein, at 235,898 to 237,397
_RS01135
Position (kb)
234
235
236 Strain fitness (log2 ratio)
-2
-1
0
1 at 233.589 kb on + strand, within ABZR87_RS01125 at 233.688 kb on + strand, within ABZR87_RS01125 at 233.688 kb on + strand, within ABZR87_RS01125 at 233.688 kb on + strand, within ABZR87_RS01125 at 233.760 kb on + strand, within ABZR87_RS01125 at 233.760 kb on + strand, within ABZR87_RS01125 at 233.760 kb on + strand, within ABZR87_RS01125 at 233.761 kb on - strand, within ABZR87_RS01125 at 233.761 kb on - strand, within ABZR87_RS01125 at 233.910 kb on + strand, within ABZR87_RS01125 at 233.910 kb on + strand, within ABZR87_RS01125 at 233.910 kb on + strand, within ABZR87_RS01125 at 233.911 kb on - strand, within ABZR87_RS01125 at 233.911 kb on - strand, within ABZR87_RS01125 at 234.020 kb on + strand, within ABZR87_RS01125 at 234.020 kb on + strand, within ABZR87_RS01125 at 234.020 kb on + strand, within ABZR87_RS01125 at 234.020 kb on + strand, within ABZR87_RS01125 at 234.021 kb on - strand, within ABZR87_RS01125 at 234.021 kb on - strand, within ABZR87_RS01125 at 234.093 kb on + strand, within ABZR87_RS01125 at 234.093 kb on + strand, within ABZR87_RS01125 at 234.093 kb on + strand, within ABZR87_RS01125 at 234.094 kb on - strand, within ABZR87_RS01125 at 234.094 kb on - strand, within ABZR87_RS01125 at 234.507 kb on + strand at 234.507 kb on + strand at 234.507 kb on + strand at 234.507 kb on + strand at 234.508 kb on - strand at 234.508 kb on - strand at 234.722 kb on + strand, within ABZR87_RS01130 at 234.723 kb on - strand, within ABZR87_RS01130 at 234.723 kb on - strand, within ABZR87_RS01130 at 234.872 kb on + strand, within ABZR87_RS01130 at 234.872 kb on + strand, within ABZR87_RS01130 at 234.873 kb on - strand, within ABZR87_RS01130 at 234.873 kb on - strand, within ABZR87_RS01130 at 234.969 kb on - strand, within ABZR87_RS01130 at 235.316 kb on + strand at 235.316 kb on + strand at 235.316 kb on + strand at 235.316 kb on + strand at 235.316 kb on + strand at 235.316 kb on + strand at 235.316 kb on + strand at 235.316 kb on + strand at 235.317 kb on - strand at 235.317 kb on - strand at 235.317 kb on - strand at 235.317 kb on - strand at 235.317 kb on - strand at 235.319 kb on + strand at 235.319 kb on + strand at 235.319 kb on + strand at 235.319 kb on + strand at 235.319 kb on + strand at 235.320 kb on - strand at 235.320 kb on - strand at 235.320 kb on - strand at 235.320 kb on - strand at 235.320 kb on - strand at 235.320 kb on - strand at 235.397 kb on + strand at 235.398 kb on - strand at 235.398 kb on - strand at 235.398 kb on - strand at 235.473 kb on - strand at 235.473 kb on - strand at 235.540 kb on + strand at 235.540 kb on + strand at 235.540 kb on + strand at 235.540 kb on + strand at 235.540 kb on + strand at 235.541 kb on - strand at 235.541 kb on - strand at 235.541 kb on - strand at 235.541 kb on - strand at 235.541 kb on - strand at 235.541 kb on - strand at 235.541 kb on - strand at 235.541 kb on - strand at 235.541 kb on - strand at 235.614 kb on + strand at 235.614 kb on + strand at 235.614 kb on + strand at 235.614 kb on + strand at 235.614 kb on + strand at 235.614 kb on + strand at 235.614 kb on + strand at 235.614 kb on + strand at 235.615 kb on - strand at 235.615 kb on - strand at 235.615 kb on - strand at 235.615 kb on - strand at 235.615 kb on - strand at 235.615 kb on - strand at 235.615 kb on - strand at 235.615 kb on - strand at 235.615 kb on - strand at 235.615 kb on - strand at 235.634 kb on + strand at 235.697 kb on - strand at 235.697 kb on - strand at 235.815 kb on - strand at 235.843 kb on + strand at 235.843 kb on + strand at 235.843 kb on + strand at 235.844 kb on - strand at 235.844 kb on - strand at 235.844 kb on - strand at 235.844 kb on - strand at 235.844 kb on - strand at 235.844 kb on - strand at 235.845 kb on + strand at 235.845 kb on + strand at 235.845 kb on + strand at 235.845 kb on + strand at 235.845 kb on + strand at 235.845 kb on + strand at 235.845 kb on + strand at 235.845 kb on + strand at 235.846 kb on - strand at 236.027 kb on + strand at 236.028 kb on - strand at 236.028 kb on - strand at 236.249 kb on + strand, within ABZR87_RS01135 at 236.249 kb on + strand, within ABZR87_RS01135 at 236.250 kb on - strand, within ABZR87_RS01135 at 236.324 kb on + strand, within ABZR87_RS01135 at 236.324 kb on + strand, within ABZR87_RS01135 at 236.325 kb on - strand, within ABZR87_RS01135 at 236.325 kb on - strand, within ABZR87_RS01135 at 236.325 kb on - strand, within ABZR87_RS01135 at 236.325 kb on - strand, within ABZR87_RS01135 at 236.327 kb on + strand, within ABZR87_RS01135 at 236.328 kb on - strand, within ABZR87_RS01135 at 236.328 kb on - strand, within ABZR87_RS01135 at 236.328 kb on - strand, within ABZR87_RS01135 at 236.328 kb on - strand, within ABZR87_RS01135 at 236.328 kb on - strand, within ABZR87_RS01135
Per-strain Table
Position Strand Gene LocusTag Fraction 3-Hydroxypropionate (C) remove 233,589 + ABZR87_RS01125 0.35 -0.5 233,688 + ABZR87_RS01125 0.42 -0.1 233,688 + ABZR87_RS01125 0.42 +0.1 233,688 + ABZR87_RS01125 0.42 +0.2 233,760 + ABZR87_RS01125 0.47 -0.3 233,760 + ABZR87_RS01125 0.47 -2.1 233,760 + ABZR87_RS01125 0.47 +0.6 233,761 - ABZR87_RS01125 0.47 -0.7 233,761 - ABZR87_RS01125 0.47 -1.0 233,910 + ABZR87_RS01125 0.58 -0.7 233,910 + ABZR87_RS01125 0.58 +0.9 233,910 + ABZR87_RS01125 0.58 +1.2 233,911 - ABZR87_RS01125 0.58 +0.4 233,911 - ABZR87_RS01125 0.58 +0.0 234,020 + ABZR87_RS01125 0.65 -0.3 234,020 + ABZR87_RS01125 0.65 -1.1 234,020 + ABZR87_RS01125 0.65 -0.2 234,020 + ABZR87_RS01125 0.65 -0.1 234,021 - ABZR87_RS01125 0.66 -0.7 234,021 - ABZR87_RS01125 0.66 +0.4 234,093 + ABZR87_RS01125 0.71 +0.2 234,093 + ABZR87_RS01125 0.71 -0.8 234,093 + ABZR87_RS01125 0.71 -0.0 234,094 - ABZR87_RS01125 0.71 -0.1 234,094 - ABZR87_RS01125 0.71 -1.0 234,507 + +0.5 234,507 + +0.0 234,507 + -0.1 234,507 + +0.6 234,508 - +0.7 234,508 - +0.6 234,722 + ABZR87_RS01130 0.24 -0.6 234,723 - ABZR87_RS01130 0.24 +0.5 234,723 - ABZR87_RS01130 0.24 -0.5 234,872 + ABZR87_RS01130 0.41 -1.3 234,872 + ABZR87_RS01130 0.41 -0.6 234,873 - ABZR87_RS01130 0.41 -1.0 234,873 - ABZR87_RS01130 0.41 +1.4 234,969 - ABZR87_RS01130 0.52 +0.5 235,316 + -0.2 235,316 + +0.2 235,316 + +1.0 235,316 + -0.4 235,316 + -0.8 235,316 + -0.1 235,316 + +0.1 235,316 + +0.1 235,317 - -0.1 235,317 - -0.1 235,317 - -0.3 235,317 - -0.0 235,317 - +0.6 235,319 + +0.6 235,319 + -0.1 235,319 + +0.1 235,319 + -1.3 235,319 + +0.4 235,320 - -0.5 235,320 - +0.2 235,320 - -0.6 235,320 - +0.3 235,320 - -0.3 235,320 - +0.8 235,397 + -0.8 235,398 - -0.1 235,398 - +0.4 235,398 - +0.2 235,473 - +0.8 235,473 - +0.4 235,540 + +0.5 235,540 + -0.0 235,540 + -0.8 235,540 + +0.4 235,540 + -1.0 235,541 - -0.5 235,541 - +0.3 235,541 - -0.8 235,541 - -0.1 235,541 - +1.3 235,541 - -0.2 235,541 - +0.8 235,541 - +0.1 235,541 - +0.1 235,614 + -0.4 235,614 + +0.1 235,614 + -1.6 235,614 + +0.4 235,614 + +0.2 235,614 + +0.6 235,614 + -0.6 235,614 + +0.4 235,615 - +0.5 235,615 - +0.0 235,615 - +0.1 235,615 - -0.0 235,615 - +0.1 235,615 - -0.2 235,615 - -0.3 235,615 - -0.7 235,615 - +0.2 235,615 - -0.1 235,634 + -0.5 235,697 - +0.5 235,697 - -2.2 235,815 - -0.3 235,843 + +0.1 235,843 + +0.6 235,843 + +0.1 235,844 - -0.6 235,844 - -0.4 235,844 - +0.6 235,844 - -0.9 235,844 - +0.2 235,844 - -0.2 235,845 + -0.5 235,845 + -0.4 235,845 + +0.2 235,845 + -0.5 235,845 + -0.4 235,845 + +0.4 235,845 + +0.8 235,845 + +0.1 235,846 - +0.5 236,027 + +0.2 236,028 - -0.0 236,028 - -0.3 236,249 + ABZR87_RS01135 0.23 +0.6 236,249 + ABZR87_RS01135 0.23 +0.8 236,250 - ABZR87_RS01135 0.23 +0.0 236,324 + ABZR87_RS01135 0.28 +0.1 236,324 + ABZR87_RS01135 0.28 +1.3 236,325 - ABZR87_RS01135 0.28 +0.2 236,325 - ABZR87_RS01135 0.28 +0.1 236,325 - ABZR87_RS01135 0.28 +0.1 236,325 - ABZR87_RS01135 0.28 -0.1 236,327 + ABZR87_RS01135 0.29 +0.2 236,328 - ABZR87_RS01135 0.29 -0.2 236,328 - ABZR87_RS01135 0.29 -1.1 236,328 - ABZR87_RS01135 0.29 +0.4 236,328 - ABZR87_RS01135 0.29 -0.7 236,328 - ABZR87_RS01135 0.29 -0.5
Or see this region's nucleotide sequence